RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 OR51M1Q9H341 326 aa15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 KNTC1P50748 2209 aa15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 GDF9O60383 454 aa15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 IFI6P09912 130 aa15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 C8orf88P0DMB2 117 aa15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 CD300CQ08708 224 aa15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 COL25A1Q9BXS0 654 aaPredicted RBP15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 ATG2BQ96BY7 2078 aa15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 EIF4EBP2Q13542 120 aaPredicted RBP15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 ZNF56Q15929 161 aa15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 CSRP2Q16527 193 aa15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 FDCSPQ8NFU4 85 aa15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 TRAF4Q9BUZ4 470 aaPredicted RBP15.56■□□□□ 0.08
SFSWAP-203ENST00000535236 RSPO4Q2I0M5 234 aaPredicted RBP15.55■□□□□ 0.08
SFSWAP-203ENST00000535236 TUBA4BQ9H853 241 aa15.55■□□□□ 0.08
SFSWAP-203ENST00000535236 SPAG17Q6Q759 2223 aa15.55■□□□□ 0.08
SFSWAP-203ENST00000535236 SCGB1A1P11684 91 aa15.55■□□□□ 0.08
SFSWAP-203ENST00000535236 C1orf100Q5SVJ3 147 aa15.55■□□□□ 0.08
SFSWAP-203ENST00000535236 ZNF383Q8NA42 475 aa15.55■□□□□ 0.08
SFSWAP-203ENST00000535236 OR51G1Q8NGK1 321 aa15.55■□□□□ 0.08
SFSWAP-203ENST00000535236 A1L4Q6 167 aa15.55■□□□□ 0.08
SFSWAP-203ENST00000535236 LGALS3P17931 250 aaKnown RBP15.55■□□□□ 0.08
SFSWAP-203ENST00000535236 MEF2BQ02080 365 aaPredicted RBP15.55■□□□□ 0.08
SFSWAP-203ENST00000535236 FAM74A4Q5TZK3 123 aa15.55■□□□□ 0.08
SFSWAP-203ENST00000535236 ELOVL1Q9BW60 279 aa15.55■□□□□ 0.08
SFSWAP-203ENST00000535236 RECKO95980 971 aa15.54■□□□□ 0.08
SFSWAP-203ENST00000535236 ZG16O60844 167 aa15.54■□□□□ 0.08
SFSWAP-203ENST00000535236 RPLP1P05386 114 aaKnown RBP15.54■□□□□ 0.08
SFSWAP-203ENST00000535236 TNFRSF9Q07011 255 aa15.54■□□□□ 0.08
SFSWAP-203ENST00000535236 CIRBPQ14011 172 aaKnown RBP15.54■□□□□ 0.08
SFSWAP-203ENST00000535236 HLA-DQB1P01920 261 aa15.54■□□□□ 0.08
SFSWAP-203ENST00000535236 COPS9Q8WXC6 57 aa15.54■□□□□ 0.08
SFSWAP-203ENST00000535236 SRSF12Q8WXF0 261 aaKnown RBP15.54■□□□□ 0.08
SFSWAP-203ENST00000535236 MDKP21741 143 aaPredicted RBP15.54■□□□□ 0.08
SFSWAP-203ENST00000535236 ARL6IP6Q8N6S5 226 aa15.54■□□□□ 0.08
SFSWAP-203ENST00000535236 TRGC1P0CF51 173 aa15.54■□□□□ 0.08
SFSWAP-203ENST00000535236 P2RY4P51582 365 aa15.54■□□□□ 0.08
SFSWAP-203ENST00000535236 MEIG1Q5JSS6 88 aa15.54■□□□□ 0.08
SFSWAP-203ENST00000535236 Q6ZT83 130 aa15.54■□□□□ 0.08
SFSWAP-203ENST00000535236 AQP3Q92482 292 aa15.54■□□□□ 0.08
SFSWAP-203ENST00000535236 PPP1R17O96001 155 aa15.53■□□□□ 0.08
SFSWAP-203ENST00000535236 TNFSF10P50591 281 aa15.53■□□□□ 0.08
SFSWAP-203ENST00000535236 ACSF3Q4G176 576 aaPredicted RBP15.53■□□□□ 0.08
SFSWAP-203ENST00000535236 PPP1R32Q7Z5V6 425 aa15.53■□□□□ 0.08
SFSWAP-203ENST00000535236 TRIP11Q15643 1979 aa15.53■□□□□ 0.08
SFSWAP-203ENST00000535236 TMEM262E9PQX1 116 aa15.53■□□□□ 0.08
SFSWAP-203ENST00000535236 RBFOX2O43251 390 aaKnown RBP eCLIP15.53■□□□□ 0.08
SFSWAP-203ENST00000535236 IGKV3-20P01619 116 aa15.53■□□□□ 0.08
SFSWAP-203ENST00000535236 TRGV3P03979 118 aa15.53■□□□□ 0.08
SFSWAP-203ENST00000535236 TCF19Q9Y242 345 aa15.53■□□□□ 0.08
SFSWAP-203ENST00000535236 HLA-DQA1P01909 254 aa15.53■□□□□ 0.08
SFSWAP-203ENST00000535236 HIST1H1AQ02539 215 aaPredicted RBP15.53■□□□□ 0.08
SFSWAP-203ENST00000535236 SPSB2Q99619 263 aa15.53■□□□□ 0.08
SFSWAP-203ENST00000535236 FAM159AQ6UWV7 190 aa15.53■□□□□ 0.08
SFSWAP-203ENST00000535236 TMEM54Q969K7 222 aa15.53■□□□□ 0.08
SFSWAP-203ENST00000535236 ZNF638Q14966 1978 aaKnown RBP15.53■□□□□ 0.08
SFSWAP-203ENST00000535236 SMIM6P0DI80 62 aa15.52■□□□□ 0.08
SFSWAP-203ENST00000535236 UNQ9370/PRO34162Q6UXP9 181 aa15.52■□□□□ 0.08
SFSWAP-203ENST00000535236 SHANK3Q9BYB0 1731 aa15.52■□□□□ 0.08
SFSWAP-203ENST00000535236 LOC107984156A0A0G2JMH3 177 aa15.52■□□□□ 0.08
SFSWAP-203ENST00000535236 LINC00862A6NCI5 91 aa15.52■□□□□ 0.08
SFSWAP-203ENST00000535236 AMY1AP04745 511 aa15.52■□□□□ 0.08
SFSWAP-203ENST00000535236 PRSS2P07478 247 aa15.52■□□□□ 0.08
SFSWAP-203ENST00000535236 CTSBP07858 339 aa15.52■□□□□ 0.08
SFSWAP-203ENST00000535236 ZNF250P15622 560 aa15.52■□□□□ 0.08
SFSWAP-203ENST00000535236 ZNF146Q15072 292 aa15.52■□□□□ 0.08
SFSWAP-203ENST00000535236 ARL17AQ8IVW1 177 aa15.52■□□□□ 0.08
SFSWAP-203ENST00000535236 LNP1A1A4G5 178 aa15.52■□□□□ 0.07
SFSWAP-203ENST00000535236 H3BTX0 84 aa15.52■□□□□ 0.07
SFSWAP-203ENST00000535236 HSPB1P04792 205 aaKnown RBP15.52■□□□□ 0.07
SFSWAP-203ENST00000535236 NUTF2P61970 127 aaKnown RBP15.52■□□□□ 0.07
SFSWAP-203ENST00000535236 PRSS53Q2L4Q9 553 aa15.52■□□□□ 0.07
SFSWAP-203ENST00000535236 GPHA2Q96T91 129 aa15.52■□□□□ 0.07
SFSWAP-203ENST00000535236 NPFFO15130 113 aa15.52■□□□□ 0.07
SFSWAP-203ENST00000535236 ZIC3O60481 467 aa15.52■□□□□ 0.07
SFSWAP-203ENST00000535236 VKORC1L1Q8N0U8 176 aa15.52■□□□□ 0.07
SFSWAP-203ENST00000535236 C7orf66A4D0T2 115 aa15.52■□□□□ 0.07
SFSWAP-203ENST00000535236 J3QW42 95 aa15.52■□□□□ 0.07
SFSWAP-203ENST00000535236 ARL14EPLP0DKL9 152 aa15.52■□□□□ 0.07
SFSWAP-203ENST00000535236 MUC1P15941 1255 aaPredicted RBP15.52■□□□□ 0.07
SFSWAP-203ENST00000535236 TIMM23BQ5SRD1 257 aa15.52■□□□□ 0.07
SFSWAP-203ENST00000535236 Q96M66 194 aa15.52■□□□□ 0.07
SFSWAP-203ENST00000535236 TPRP12270 2363 aaKnown RBP15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 TRBV5-7A0A0A0MS05 114 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 A0A1W2PR77 199 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 LHFPL5Q8TAF8 219 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 HSPB9Q9BQS6 159 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 PCM1Q15154 2024 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 IGHV3-35A0A0C4DH35 117 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 HKR1P10072 659 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 PKIAP61925 76 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 PEAR1Q5VY43 1037 aaPredicted RBP15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 GEMIN7Q9H840 131 aaKnown RBP15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 C4orf51C9J302 202 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 GREM1O60565 184 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 IL4P05112 153 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 SMIM10L1P0DMW3 83 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 DNLZQ5SXM8 178 aa15.51■□□□□ 0.07
SFSWAP-203ENST00000535236 SMIM10Q96HG1 83 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms