RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 PRRC1Q96M27 445 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 SDF2Q99470 211 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 OSBPL10Q9BXB5 764 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 GABARAPL3Q9BY60 117 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 DNTTIP1Q9H147 329 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 SLCO1B3Q9NPD5 702 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 TMEM100Q9NV29 134 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 GLTPQ9NZD2 209 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 ZNF225Q9UK10 706 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 TP53TG1Q9Y2A0 90 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 HILPDAQ9Y5L2 63 aa2.87□□□□□ -1.95
ECHDC1-223ENST00000534442 IGHV3OR15-7A0A075B7D8 119 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 TRAV25A0A0B4J276 109 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 SYCE1LA8MT33 242 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 ODF3BA8MYP8 253 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 I3L521 148 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 OR2T1O43869 369 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 WISP3O95389 354 aaPredicted RBP2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 STAG3L3P0CL85 134 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 IGHV1-8P0DP01 117 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 MYL2P10916 166 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 PGAM1P18669 254 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 RPS4Y1P22090 263 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 MAGEA6P43360 314 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 TGM4P49221 684 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 CRISP1P54107 249 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 CRISP3P54108 245 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 CAV3P56539 151 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 WNT4P56705 351 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 PSG4Q00888 419 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 MYL5Q02045 173 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 PSG5Q15238 335 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 MAPK14Q16539 360 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 RFX4Q33E94 735 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 LDLRAD2Q5SZI1 272 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 FAM71E1Q6IPT2 247 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 FBXW12Q6X9E4 464 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 SSX9Q7RTT3 188 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 TCF24Q7RTU0 167 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 C12orf43Q96C57 262 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 CERS2Q96G23 380 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 UBE2E2Q96LR5 201 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 CCDC115Q96NT0 180 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 ZIM3Q96PE6 472 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 KCNE3Q9Y6H6 103 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 WSB1Q9Y6I7 421 aa2.86□□□□□ -1.95
ECHDC1-223ENST00000534442 TRAV39A0A0B4J263 110 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 A0A0B4J2A0 478 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 IQCF6A8MYZ5 107 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 AKR7A2O43488 359 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 IGHG2P01859 326 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 GFAPP14136 432 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 NQO1P15559 274 aaKnown RBP2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 CD24P25063 80 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 HRH1P35367 487 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 MAGEA3P43357 314 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 KRTAP10-5P60370 271 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 NUTF2P61970 127 aaKnown RBP2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 ELF3P78545 371 aaPredicted RBP2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 PAX5Q02548 391 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 CKAP4Q07065 602 aaKnown RBP2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 NAB1Q13506 487 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 RSPO1Q2MKA7 263 aaPredicted RBP2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 ZBED5Q49AG3 693 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 SPANXN3Q5MJ09 141 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 MINOS1Q5TGZ0 78 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 OR2T2Q6IF00 324 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 C6orf120Q7Z4R8 191 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 SLC35E3Q7Z769 313 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 NECAP1Q8NC96 275 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 OR13D1Q8NGV5 346 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 OR6X1Q8NH79 312 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 C1orf54Q8WWF1 131 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 RNF185Q96GF1 192 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 OR5B12Q96R08 314 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 GGTLC1Q9BX51 225 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 OR2H1Q9GZK4 316 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 USE1Q9NZ43 259 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 MTCH1Q9NZJ7 389 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 SHPKQ9UHJ6 478 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 LGALS13Q9UHV8 139 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 GOLT1BQ9Y3E0 138 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 MINOS1-NBL1R4GNA1 71 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 HSPE1-MOB4S4R3N1 261 aa2.85□□□□□ -1.95
ECHDC1-223ENST00000534442 TRAV10A0A0B4J240 114 aa2.84□□□□□ -1.95
ECHDC1-223ENST00000534442 KBTBD11-OT1A0A1B0GTJ5 212 aa2.84□□□□□ -1.95
ECHDC1-223ENST00000534442 OR11H12B2RN74 326 aa2.84□□□□□ -1.95
ECHDC1-223ENST00000534442 LINC01619G3V211 115 aa2.84□□□□□ -1.95
ECHDC1-223ENST00000534442 IGLV2-23P01705 113 aa2.84□□□□□ -1.95
ECHDC1-223ENST00000534442 GUSBP08236 651 aa2.84□□□□□ -1.95
ECHDC1-223ENST00000534442 ACSM4P0C7M7 580 aa2.84□□□□□ -1.95
ECHDC1-223ENST00000534442 PSMB8P28062 276 aa2.84□□□□□ -1.95
ECHDC1-223ENST00000534442 GRPRP30550 384 aa2.84□□□□□ -1.95
ECHDC1-223ENST00000534442 GPX4P36969 197 aaPredicted RBP2.84□□□□□ -1.95
ECHDC1-223ENST00000534442 MRPL19P49406 292 aaKnown RBP2.84□□□□□ -1.95
ECHDC1-223ENST00000534442 CLDN8P56748 225 aa2.84□□□□□ -1.95
ECHDC1-223ENST00000534442 COPZ1P61923 177 aa2.84□□□□□ -1.95
ECHDC1-223ENST00000534442 DYNC1I2Q13409 638 aaKnown RBP2.84□□□□□ -1.95
ECHDC1-223ENST00000534442 CLINT1Q14677 625 aa2.84□□□□□ -1.95
ECHDC1-223ENST00000534442 PEX26Q7Z412 305 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms