RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 PDCD1Q15116 288 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 CEACAM16Q2WEN9 425 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 TMEM42Q69YG0 159 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 WDR5BQ86VZ2 330 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 CPT1CQ8TCG5 803 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 GATAD1Q8WUU5 269 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 BORCS8Q96FH0 119 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 RAB40CQ96S21 281 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 SHANK1Q9Y566 2161 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 WDFY4Q6ZS81 3184 aa16.18■□□□□ 0.18
SMPD1-210ENST00000534405 PCSK5Q92824 1860 aa16.17■□□□□ 0.18
SMPD1-210ENST00000534405 TRAV9-1A0A075B6T8 112 aa16.17■□□□□ 0.18
SMPD1-210ENST00000534405 DNPH1O43598 174 aa16.17■□□□□ 0.18
SMPD1-210ENST00000534405 PPYP01298 95 aa16.17■□□□□ 0.18
SMPD1-210ENST00000534405 CDC34P49427 236 aaPredicted RBP16.17■□□□□ 0.18
SMPD1-210ENST00000534405 CNN3Q15417 329 aaKnown RBP16.17■□□□□ 0.18
SMPD1-210ENST00000534405 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.17■□□□□ 0.18
SMPD1-210ENST00000534405 OR10D3Q8NH80 312 aa16.17■□□□□ 0.18
SMPD1-210ENST00000534405 FOXB1Q99853 325 aa16.17■□□□□ 0.18
SMPD1-210ENST00000534405 WDR61Q9GZS3 305 aaKnown RBP16.17■□□□□ 0.18
SMPD1-210ENST00000534405 C1QTNF9BB2RNN3 333 aa16.17■□□□□ 0.18
SMPD1-210ENST00000534405 GNRHRP30968 328 aa16.17■□□□□ 0.18
SMPD1-210ENST00000534405 Q6ZPA2 131 aa16.17■□□□□ 0.18
SMPD1-210ENST00000534405 LRFN3Q9BTN0 628 aa16.17■□□□□ 0.18
SMPD1-210ENST00000534405 LOC102724200A0A096LPH7 203 aaPredicted RBP16.16■□□□□ 0.18
SMPD1-210ENST00000534405 PINLYPA6NC86 204 aa16.16■□□□□ 0.18
SMPD1-210ENST00000534405 NHLH1Q02575 133 aa16.16■□□□□ 0.18
SMPD1-210ENST00000534405 ARL16Q0P5N6 197 aa16.16■□□□□ 0.18
SMPD1-210ENST00000534405 OR52L2PQ8NGH6 319 aa16.16■□□□□ 0.18
SMPD1-210ENST00000534405 SFRP2Q96HF1 295 aa16.16■□□□□ 0.18
SMPD1-210ENST00000534405 OR2H1Q9GZK4 316 aa16.16■□□□□ 0.18
SMPD1-210ENST00000534405 PRDM6Q9NQX0 595 aa16.16■□□□□ 0.18
SMPD1-210ENST00000534405 CTXND1A0A1B0GTU2 59 aa16.16■□□□□ 0.18
SMPD1-210ENST00000534405 hCG_38984A0A1B0GV85 526 aa16.16■□□□□ 0.18
SMPD1-210ENST00000534405 GAGE12BA1L429 117 aa16.16■□□□□ 0.18
SMPD1-210ENST00000534405 RAMP3O60896 148 aa16.16■□□□□ 0.18
SMPD1-210ENST00000534405 C1QTNF9P0C862 333 aa16.16■□□□□ 0.18
SMPD1-210ENST00000534405 C3orf79P0CE67 100 aa16.16■□□□□ 0.18
SMPD1-210ENST00000534405 FAM71F2Q6NXP2 309 aa16.16■□□□□ 0.18
SMPD1-210ENST00000534405 BATF2Q8N1L9 274 aa16.16■□□□□ 0.18
SMPD1-210ENST00000534405 ZNHIT1O43257 154 aa16.15■□□□□ 0.18
SMPD1-210ENST00000534405 AMTP48728 403 aa16.15■□□□□ 0.18
SMPD1-210ENST00000534405 LHFPL2Q6ZUX7 228 aa16.15■□□□□ 0.18
SMPD1-210ENST00000534405 OR4S2Q8NH73 311 aa16.15■□□□□ 0.18
SMPD1-210ENST00000534405 GMPPAQ96IJ6 420 aaPredicted RBP16.15■□□□□ 0.18
SMPD1-210ENST00000534405 WNT10AQ9GZT5 417 aa16.15■□□□□ 0.18
SMPD1-210ENST00000534405 CHODLQ9H9P2 273 aa16.15■□□□□ 0.18
SMPD1-210ENST00000534405 TIMM9Q9Y5J7 89 aa16.15■□□□□ 0.18
SMPD1-210ENST00000534405 KIAA1324LA8MWY0 1029 aaPredicted RBP16.15■□□□□ 0.18
SMPD1-210ENST00000534405 AHRRA9YTQ3 701 aa16.15■□□□□ 0.18
SMPD1-210ENST00000534405 C9orf172C9J069 976 aa16.15■□□□□ 0.18
SMPD1-210ENST00000534405 IGHV3-9P01782 118 aa16.15■□□□□ 0.18
SMPD1-210ENST00000534405 DAZAP2Q15038 168 aaPredicted RBP16.15■□□□□ 0.18
SMPD1-210ENST00000534405 TRIM61Q5EBN2 209 aa16.15■□□□□ 0.18
SMPD1-210ENST00000534405 KCNS1Q96KK3 526 aa16.15■□□□□ 0.18
SMPD1-210ENST00000534405 PMCHL1Q16048 86 aa16.14■□□□□ 0.17
SMPD1-210ENST00000534405 SLC23A3Q6PIS1 610 aa16.14■□□□□ 0.17
SMPD1-210ENST00000534405 ERASQ7Z444 233 aa16.14■□□□□ 0.17
SMPD1-210ENST00000534405 OSR2Q8N2R0 312 aa16.14■□□□□ 0.17
SMPD1-210ENST00000534405 GNB4Q9HAV0 340 aa16.14■□□□□ 0.17
SMPD1-210ENST00000534405 DOCK10Q96BY6 2186 aa16.14■□□□□ 0.17
SMPD1-210ENST00000534405 ODAMA1E959 279 aa16.14■□□□□ 0.17
SMPD1-210ENST00000534405 PAGE4O60829 102 aa16.14■□□□□ 0.17
SMPD1-210ENST00000534405 DUSP3P51452 185 aaPredicted RBP16.14■□□□□ 0.17
SMPD1-210ENST00000534405 PEAR1Q5VY43 1037 aaPredicted RBP16.14■□□□□ 0.17
SMPD1-210ENST00000534405 HAPLN4Q86UW8 402 aa16.14■□□□□ 0.17
SMPD1-210ENST00000534405 TAF15Q92804 592 aaKnown RBP eCLIP16.14■□□□□ 0.17
SMPD1-210ENST00000534405 FREM1Q5H8C1 2179 aa16.13■□□□□ 0.17
SMPD1-210ENST00000534405 C17orf112F2Z3M2 114 aa16.13■□□□□ 0.17
SMPD1-210ENST00000534405 HBG1P69891 147 aa16.13■□□□□ 0.17
SMPD1-210ENST00000534405 HBG2P69892 147 aa16.13■□□□□ 0.17
SMPD1-210ENST00000534405 UBALD2Q8IYN6 164 aa16.13■□□□□ 0.17
SMPD1-210ENST00000534405 PIGCQ92535 297 aa16.13■□□□□ 0.17
SMPD1-210ENST00000534405 CELSR3Q9NYQ7 3312 aa16.13■□□□□ 0.17
SMPD1-210ENST00000534405 MDFIC2A0A1B0GVS7 189 aa16.13■□□□□ 0.17
SMPD1-210ENST00000534405 A0A1W2PS18 150 aa16.13■□□□□ 0.17
SMPD1-210ENST00000534405 HMGB3O15347 200 aaKnown RBP16.13■□□□□ 0.17
SMPD1-210ENST00000534405 RBFOX2O43251 390 aaKnown RBP eCLIP16.13■□□□□ 0.17
SMPD1-210ENST00000534405 S1PR2O95136 353 aa16.13■□□□□ 0.17
SMPD1-210ENST00000534405 HLA-DRB5Q30154 266 aa16.13■□□□□ 0.17
SMPD1-210ENST00000534405 AMMECR1LQ6DCA0 310 aa16.13■□□□□ 0.17
SMPD1-210ENST00000534405 SLC25A22Q9H936 323 aa16.13■□□□□ 0.17
SMPD1-210ENST00000534405 J3QR06 171 aa16.12■□□□□ 0.17
SMPD1-210ENST00000534405 J3QW42 95 aa16.12■□□□□ 0.17
SMPD1-210ENST00000534405 KITLGP21583 273 aa16.12■□□□□ 0.17
SMPD1-210ENST00000534405 GFRA1P56159 465 aa16.12■□□□□ 0.17
SMPD1-210ENST00000534405 RBPJQ06330 500 aa16.12■□□□□ 0.17
SMPD1-210ENST00000534405 OR8B8Q15620 311 aa16.12■□□□□ 0.17
SMPD1-210ENST00000534405 OR10J3Q5JRS4 329 aa16.12■□□□□ 0.17
SMPD1-210ENST00000534405 PLCXD3Q63HM9 321 aa16.12■□□□□ 0.17
SMPD1-210ENST00000534405 STUMQ69YW2 141 aa16.12■□□□□ 0.17
SMPD1-210ENST00000534405 C19orf35Q6ZS72 473 aa16.12■□□□□ 0.17
SMPD1-210ENST00000534405 OR5D13Q8NGL4 314 aa16.12■□□□□ 0.17
SMPD1-210ENST00000534405 OR4P4Q8NGL7 312 aa16.12■□□□□ 0.17
SMPD1-210ENST00000534405 OR2T8A6NH00 312 aa16.11■□□□□ 0.17
SMPD1-210ENST00000534405 C11orf94C9JXX5 98 aa16.11■□□□□ 0.17
SMPD1-210ENST00000534405 TNFSF15O95150 251 aa16.11■□□□□ 0.17
SMPD1-210ENST00000534405 SLC25A6P12236 298 aa16.11■□□□□ 0.17
SMPD1-210ENST00000534405 GDF1P27539 372 aa16.11■□□□□ 0.17
SMPD1-210ENST00000534405 GNB1P62873 340 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms