RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 ETV3LQ6ZN32 361 aa11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 SSX8Q7RTT4 187 aa11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 DIRC2Q96SL1 478 aa11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 PSMG3Q9BT73 122 aaPredicted RBP11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 RPRMQ9NS64 109 aa11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 YLPM1P49750 1951 aaKnown RBP11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 SAA2-SAA4A0A096LPE2 208 aa11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 PMS2P5A8MQ11 134 aa11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 CEBPZOSA8MTT3 80 aa11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 ITGB1BP1O14713 200 aa11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 SAA2P0DJI9 122 aaPredicted RBP11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 OR13C7P0DN81 318 aa11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 RPS16P62249 146 aaKnown RBP11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 VKORC1L1Q8N0U8 176 aa11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 CIB3Q96Q77 187 aaPredicted RBP11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 VKORC1Q9BQB6 163 aa11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 PARD6GQ9BYG4 376 aaPredicted RBP11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 RAXQ9Y2V3 346 aa11.25□□□□□ -0.61
FOXRED1-218ENST00000534315 TRGV8A0A0C4DH27 118 aa11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 TMPRSS2O15393 492 aa11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 RBFOX2O43251 390 aaKnown RBP eCLIP11.24□□□□□ -0.611e-15■■■■■ 63.4
FOXRED1-218ENST00000534315 HAGHQ16775 308 aa11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 PRAMEF5Q5TYX0 476 aa11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 DDB2Q92466 427 aa11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 TAF15Q92804 592 aaKnown RBP eCLIP11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 S1PR3Q99500 378 aa11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 HIPK2Q9H2X6 1198 aa11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 SAP30LQ9HAJ7 183 aa11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 IDI2-AS1Q9NZ38 188 aa11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 PRELID3BQ9Y3B1 194 aa11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 ZNF729A6NN14 1252 aaPredicted RBP11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 MMP23AO75900 390 aa11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 HBE1P02100 147 aa11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 NDUFB7P17568 137 aa11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 ZNF439Q8NDP4 499 aa11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 NEUROG1Q92886 237 aa11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 AIFM2Q9BRQ8 373 aa11.24□□□□□ -0.61
FOXRED1-218ENST00000534315 NKX6-3A6NJ46 265 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 SHISA9B4DS77 424 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 AKR1C3P42330 323 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 GNG10P50151 68 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 HNF4GQ14541 408 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 ZNF726P1Q15940 193 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 HFEQ30201 348 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 AWAT1Q58HT5 328 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 DMRTC2Q8IXT2 367 aaPredicted RBP11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 ZNF251Q9BRH9 671 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 SMDT1Q9H4I9 107 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 LINC00574Q9H8X3 128 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 NGBQ9NPG2 151 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 GAB2Q9UQC2 676 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 SPTBN4Q9H254 2564 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 TRAV38-1A0A0B4J264 116 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 FAM90A9PA6NNJ1 464 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 IFNA17P01571 189 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 NQO2P16083 231 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 KIR2DS2P43631 304 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 ELLP55199 621 aaPredicted RBP11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 RAB2AP61019 212 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 ERVK-16P61578 105 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 SERF2P84101 59 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 AARDQ4LEZ3 155 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 SSX7Q7RTT5 188 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 LYG1Q8N1E2 194 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 OR10P1Q8NGE3 313 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 CLDND2Q8NHS1 167 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 CORO2AQ92828 525 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 RBMXL1Q96E39 390 aaKnown RBP11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 C20orf24Q9BUV8 137 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 TMEM147Q9BVK8 224 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 EGLN1Q9GZT9 426 aa11.23□□□□□ -0.61
FOXRED1-218ENST00000534315 TET2Q6N021 2002 aaPredicted RBP11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 TRAV3A0A0B4J244 114 aa11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 TRAV1-1A0A0B4J248 108 aa11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 E7EQL1 145 aa11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 SCAF4O95104 1147 aaKnown RBP11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 MRPS11P82912 194 aaKnown RBP11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 ICAM4Q14773 271 aa11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 ATP6V1FQ16864 119 aa11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 NCMAPQ5T1S8 102 aa11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 OR4A16Q8NH70 328 aa11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 OR4S2Q8NH73 311 aa11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 RNASE6Q93091 150 aaKnown RBP11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 PINX1Q96BK5 328 aaKnown RBP11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 RCC1LQ96I51 464 aaKnown RBP11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 TMEM140Q9NV12 185 aa11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 SLC25A10Q9UBX3 287 aaPredicted RBP11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 NDRG3Q9UGV2 375 aa11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 KALRNO60229 2985 aa11.22□□□□□ -0.61
FOXRED1-218ENST00000534315 hADV38S2A0JD32 116 aa11.21□□□□□ -0.61
FOXRED1-218ENST00000534315 C15orf62A8K5M9 175 aa11.21□□□□□ -0.61
FOXRED1-218ENST00000534315 TMEM178BH3BS89 294 aa11.21□□□□□ -0.61
FOXRED1-218ENST00000534315 M0R036 132 aa11.21□□□□□ -0.61
FOXRED1-218ENST00000534315 FCN3O75636 299 aa11.21□□□□□ -0.61
FOXRED1-218ENST00000534315 SNRNP70P08621 437 aaKnown RBP11.21□□□□□ -0.61
FOXRED1-218ENST00000534315 UCNP55089 124 aa11.21□□□□□ -0.61
FOXRED1-218ENST00000534315 RELBQ01201 579 aa11.21□□□□□ -0.61
FOXRED1-218ENST00000534315 TMEM41BQ5BJD5 291 aa11.21□□□□□ -0.61
FOXRED1-218ENST00000534315 SOHLH1Q5JUK2 328 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms