RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 C15orf32Q32M92 178 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 RNF212Q495C1 297 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 FAM106AQ4KMX7 169 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 ZNF585BQ52M93 769 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 TMEM236Q5W0B7 351 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 MZT2BQ6NZ67 158 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 MZT2AQ6P582 158 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 UNQ9165/PRO28630Q6UXU0 137 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 HACD2Q6Y1H2 254 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 BCDIN3DQ7Z5W3 292 aaKnown RBP4.63□□□□□ -1.67
CD44-237ENST00000534082 C5orf24Q7Z6I8 188 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 NECAP1Q8NC96 275 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 SETD9Q8NE22 299 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 OR51A4Q8NGJ6 313 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 OR52N1Q8NH53 320 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 C8orf49Q96NF6 230 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 YPEL2Q96QA6 119 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 GPER1Q99527 375 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 TEX12Q9BXU0 123 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 C5orf66Q9H5L9 145 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 TMBIM4Q9HC24 238 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 TVP23BQ9NYZ1 205 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 MDFICQ9P1T7 246 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 CELA1Q9UNI1 258 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 X6R8D5 127 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 PKHD1L1Q86WI1 4243 aa4.63□□□□□ -1.67
CD44-237ENST00000534082 NACAE9PAV3 2078 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 A0A1W2PQL4 384 aaPredicted RBP4.62□□□□□ -1.67
CD44-237ENST00000534082 FAM90A7PA6NKC0 464 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 SULT1C4O75897 302 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 CDRT1O95170 752 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 IGHV3-23P01764 117 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 ISG15P05161 165 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 OSMP13725 252 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 MIFP14174 115 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 ATP6V1B2P21281 511 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 XGP55808 180 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 ARPC4P59998 168 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 C12orf74Q32Q52 190 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 LY6G6FQ5SQ64 297 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 FAM220AQ7Z4H9 259 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 PDPNQ86YL7 162 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 GAPTQ8N292 157 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 OR2G2Q8NGZ5 317 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 CPNE2Q96FN4 548 aaPredicted RBP4.62□□□□□ -1.67
CD44-237ENST00000534082 EFCAB1Q9HAE3 211 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 KCNIP1Q9NZI2 227 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 MRPL27Q9P0M9 148 aaKnown RBP4.62□□□□□ -1.67
CD44-237ENST00000534082 GNG8Q9UK08 70 aa4.62□□□□□ -1.67
CD44-237ENST00000534082 AGRNO00468 2067 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 NBDYA0A0U1RRE5 68 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 M0R129 80 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 PRKYO43930 277 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 ATP6V1G1O75348 118 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 IGLV2-23P01705 113 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 APOA2P02652 100 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 S100A6P06703 90 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 CRYGBP07316 175 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 MYOD1P15172 320 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 SERPINA2P20848 420 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 PSMD7P51665 324 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 CRISP1P54107 249 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 NANOS3P60323 173 aaKnown RBP4.61□□□□□ -1.67
CD44-237ENST00000534082 GK3PQ14409 553 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 TP53I3Q53FA7 332 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 GLT8D1Q68CQ7 371 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 LAMTOR1Q6IAA8 161 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 OR2T5Q6IEZ7 315 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 CLEC19AQ6UXS0 136 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 ASCL4Q6XD76 172 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 Q6ZSN1 163 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 ZNF554Q86TJ5 538 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 OR10H4Q8NGA5 316 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 OR2T29Q8NH02 315 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 GIPC3Q8TF64 312 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 SRSF12Q8WXF0 261 aaKnown RBP4.61□□□□□ -1.67
CD44-237ENST00000534082 ABHD14BQ96IU4 210 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 UQCC2Q9BRT2 126 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 NICN1Q9BSH3 213 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 RNF167Q9H6Y7 350 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 SPACA1Q9HBV2 294 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 IL36GQ9NZH8 169 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 STEAP1Q9UHE8 339 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 PFDN2Q9UHV9 154 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 UFC1Q9Y3C8 167 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 S4R3C0 116 aa4.61□□□□□ -1.67
CD44-237ENST00000534082 DNAH8Q96JB1 4490 aa4.6□□□□□ -1.67
CD44-237ENST00000534082 A0A1W2PP11 408 aa4.6□□□□□ -1.67
CD44-237ENST00000534082 TCRBV5S2A0A599 114 aa4.6□□□□□ -1.67
CD44-237ENST00000534082 C15orf61A6NNL5 157 aa4.6□□□□□ -1.67
CD44-237ENST00000534082 MCRIP1C9JLW8 97 aa4.6□□□□□ -1.67
CD44-237ENST00000534082 BAG2O95816 211 aa4.6□□□□□ -1.67
CD44-237ENST00000534082 OR2T7P0C7T2 308 aa4.6□□□□□ -1.67
CD44-237ENST00000534082 GALP22466 123 aa4.6□□□□□ -1.67
CD44-237ENST00000534082 ELLP55199 621 aaPredicted RBP4.6□□□□□ -1.67
CD44-237ENST00000534082 RPS27AP62979 156 aaKnown RBP4.6□□□□□ -1.67
CD44-237ENST00000534082 RELQ04864 619 aaPredicted RBP4.6□□□□□ -1.67
CD44-237ENST00000534082 TNXAQ16473 311 aa4.6□□□□□ -1.67
CD44-237ENST00000534082 AADACL4Q5VUY2 407 aa4.6□□□□□ -1.67
CD44-237ENST00000534082 NXNL2Q5VZ03 156 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 796.4 ms