RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 MRGPRFQ96AM1 343 aa13.95□□□□□ -0.18
NXF1-216ENST00000533499 HARBI1Q96MB7 349 aa13.95□□□□□ -0.18
NXF1-216ENST00000533499 KIAA1456Q9P272 454 aa13.95□□□□□ -0.18
NXF1-216ENST00000533499 MOB4Q9Y3A3 225 aa13.95□□□□□ -0.18
NXF1-216ENST00000533499 NF1P21359 2839 aa13.95□□□□□ -0.18
NXF1-216ENST00000533499 TEX13DA0A0J9YY54 714 aaPredicted RBP13.94□□□□□ -0.18
NXF1-216ENST00000533499 PLA2G10O15496 165 aa13.94□□□□□ -0.18
NXF1-216ENST00000533499 KIR2DS2P43631 304 aa13.94□□□□□ -0.18
NXF1-216ENST00000533499 F2RL1P55085 397 aa13.94□□□□□ -0.18
NXF1-216ENST00000533499 EBI3Q14213 229 aa13.94□□□□□ -0.18
NXF1-216ENST00000533499 MZT2BQ6NZ67 158 aa13.94□□□□□ -0.18
NXF1-216ENST00000533499 OR4S2Q8NH73 311 aa13.94□□□□□ -0.18
NXF1-216ENST00000533499 DDB2Q92466 427 aa13.94□□□□□ -0.18
NXF1-216ENST00000533499 ZNF486Q96H40 463 aaPredicted RBP13.94□□□□□ -0.18
NXF1-216ENST00000533499 NPFFR1Q9GZQ6 430 aa13.94□□□□□ -0.18
NXF1-216ENST00000533499 C1RLQ9NZP8 487 aa13.94□□□□□ -0.18
NXF1-216ENST00000533499 VSIG4Q9Y279 399 aa13.94□□□□□ -0.18
NXF1-216ENST00000533499 ZFHX3Q15911 3703 aa13.93□□□□□ -0.18
NXF1-216ENST00000533499 NBR2O15453 112 aa13.93□□□□□ -0.18
NXF1-216ENST00000533499 AKR1C4P17516 323 aa13.93□□□□□ -0.18
NXF1-216ENST00000533499 EIF4EBP1Q13541 118 aaPredicted RBP13.93□□□□□ -0.18
NXF1-216ENST00000533499 SURF2Q15527 256 aaPredicted RBP13.93□□□□□ -0.18
NXF1-216ENST00000533499 C16orf82Q7Z2V1 217 aa13.93□□□□□ -0.18
NXF1-216ENST00000533499 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.93□□□□□ -0.18
NXF1-216ENST00000533499 OR4C13Q8NGP0 309 aa13.93□□□□□ -0.18
NXF1-216ENST00000533499 TSNAXQ99598 290 aaKnown RBP13.93□□□□□ -0.18
NXF1-216ENST00000533499 RASL11BQ9BPW5 248 aa13.93□□□□□ -0.18
NXF1-216ENST00000533499 C5orf66Q9H5L9 145 aa13.93□□□□□ -0.18
NXF1-216ENST00000533499 LIN7CQ9NUP9 197 aaKnown RBP13.93□□□□□ -0.18
NXF1-216ENST00000533499 GPR132Q9UNW8 380 aa13.93□□□□□ -0.18
NXF1-216ENST00000533499 MPPED1O15442 326 aa13.92□□□□□ -0.18
NXF1-216ENST00000533499 RAMP3O60896 148 aa13.92□□□□□ -0.18
NXF1-216ENST00000533499 RPA2P15927 270 aa13.92□□□□□ -0.18
NXF1-216ENST00000533499 LPAR6P43657 344 aa13.92□□□□□ -0.18
NXF1-216ENST00000533499 IFITM3Q01628 133 aa13.92□□□□□ -0.18
NXF1-216ENST00000533499 RBMS2Q15434 407 aaKnown RBP13.92□□□□□ -0.18
NXF1-216ENST00000533499 Q8N6K4 173 aa13.92□□□□□ -0.18
NXF1-216ENST00000533499 ADAD2Q8NCV1 583 aaKnown RBP13.92□□□□□ -0.18
NXF1-216ENST00000533499 CLCC1Q96S66 551 aa13.92□□□□□ -0.18
NXF1-216ENST00000533499 SLC25A21Q9BQT8 299 aaPredicted RBP13.92□□□□□ -0.18
NXF1-216ENST00000533499 RTBDNQ9BSG5 229 aaPredicted RBP13.92□□□□□ -0.18
NXF1-216ENST00000533499 FBXL15Q9H469 300 aa13.92□□□□□ -0.18
NXF1-216ENST00000533499 FAM240BA0A1B0GVZ2 78 aa13.91□□□□□ -0.18
NXF1-216ENST00000533499 M0QZK8 103 aa13.91□□□□□ -0.18
NXF1-216ENST00000533499 SLC25A17O43808 307 aa13.91□□□□□ -0.18
NXF1-216ENST00000533499 F2RP25116 425 aa13.91□□□□□ -0.18
NXF1-216ENST00000533499 RIPPLY3P57055 190 aa13.91□□□□□ -0.18
NXF1-216ENST00000533499 DEFA1P59665 94 aa13.91□□□□□ -0.18
NXF1-216ENST00000533499 DEFA3P59666 94 aa13.91□□□□□ -0.18
NXF1-216ENST00000533499 BLCAPP62952 87 aa13.91□□□□□ -0.18
NXF1-216ENST00000533499 TMEM177Q53S58 311 aa13.91□□□□□ -0.18
NXF1-216ENST00000533499 SSX9Q7RTT3 188 aa13.91□□□□□ -0.18
NXF1-216ENST00000533499 OR8H1Q8NGG4 311 aa13.91□□□□□ -0.18
NXF1-216ENST00000533499 METTL1Q9UBP6 276 aaKnown RBP13.91□□□□□ -0.18
NXF1-216ENST00000533499 TBC1D24Q9ULP9 559 aa13.91□□□□□ -0.18
NXF1-216ENST00000533499 C3orf85A0A1B0GTC6 90 aa13.9□□□□□ -0.18
NXF1-216ENST00000533499 SERPINE2P07093 398 aa13.9□□□□□ -0.18
NXF1-216ENST00000533499 BTCP35070 178 aa13.9□□□□□ -0.18
NXF1-216ENST00000533499 RND3P61587 244 aa13.9□□□□□ -0.18
NXF1-216ENST00000533499 ASAH1Q13510 395 aa13.9□□□□□ -0.18
NXF1-216ENST00000533499 PSG5Q15238 335 aa13.9□□□□□ -0.18
NXF1-216ENST00000533499 SP6Q3SY56 376 aa13.9□□□□□ -0.18
NXF1-216ENST00000533499 VMA21Q3ZAQ7 101 aa13.9□□□□□ -0.18
NXF1-216ENST00000533499 SGPP2Q8IWX5 399 aa13.9□□□□□ -0.18
NXF1-216ENST00000533499 VKORC1L1Q8N0U8 176 aa13.9□□□□□ -0.18
NXF1-216ENST00000533499 C5orf56Q8N8D9 126 aa13.9□□□□□ -0.18
NXF1-216ENST00000533499 OSR1Q8TAX0 266 aaPredicted RBP13.9□□□□□ -0.18
NXF1-216ENST00000533499 ENKURQ8TC29 256 aa13.9□□□□□ -0.18
NXF1-216ENST00000533499 CD300LFQ8TDQ1 290 aa13.9□□□□□ -0.18
NXF1-216ENST00000533499 PRSS22Q9GZN4 317 aa13.9□□□□□ -0.18
NXF1-216ENST00000533499 FLVCR2Q9UPI3 526 aa13.9□□□□□ -0.18
NXF1-216ENST00000533499 CUBNO60494 3623 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 RRHO14718 337 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 ARPC1BO15143 372 aaKnown RBP13.89□□□□□ -0.19
NXF1-216ENST00000533499 FGF16O43320 207 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 S1PR2O95136 353 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 NDUFB6O95139 128 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 LGALS7P47929 136 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 RAG2P55895 527 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 BRWD1-AS2P59051 145 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 TRIM16LQ309B1 348 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 KRTAP24-1Q3LI83 254 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 Q6ZSV7 163 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 CENPSQ8N2Z9 138 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 Q8N9W7 124 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 DMBX1Q8NFW5 382 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 ABHD5Q8WTS1 349 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 ZFAND2BQ8WV99 257 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 RNF5Q99942 180 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 NAA60Q9H7X0 242 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 BEX1Q9HBH7 125 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 PLSCR3Q9NRY6 295 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 SIGLEC9Q9Y336 463 aa13.89□□□□□ -0.19
NXF1-216ENST00000533499 TRAV6A0A075B6T7 132 aa13.88□□□□□ -0.19
NXF1-216ENST00000533499 SRRM4A7MD48 611 aaKnown RBP13.88□□□□□ -0.19
NXF1-216ENST00000533499 HPRT1P00492 218 aa13.88□□□□□ -0.19
NXF1-216ENST00000533499 HRASP01112 189 aa13.88□□□□□ -0.19
NXF1-216ENST00000533499 VAMP1P23763 118 aa13.88□□□□□ -0.19
NXF1-216ENST00000533499 ERVK-16P61578 105 aa13.88□□□□□ -0.19
NXF1-216ENST00000533499 GNB1P62873 340 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms