RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 EXTL2Q9UBQ6 330 aa16.02■□□□□ 0.16
CCS-208ENST00000533244 CEPT1Q9Y6K0 416 aa16.02■□□□□ 0.16
CCS-208ENST00000533244 SRRM4A7MD48 611 aaKnown RBP16.02■□□□□ 0.15
CCS-208ENST00000533244 EGR2P11161 476 aaPredicted RBP16.02■□□□□ 0.15
CCS-208ENST00000533244 ZNF562Q6V9R5 426 aa16.02■□□□□ 0.15
CCS-208ENST00000533244 KCTD9Q7L273 389 aa16.02■□□□□ 0.15
CCS-208ENST00000533244 HSD17B10Q99714 261 aaKnown RBP16.02■□□□□ 0.15
CCS-208ENST00000533244 CCL28Q9NRJ3 127 aa16.02■□□□□ 0.15
CCS-208ENST00000533244 EHFQ9NZC4 300 aa16.02■□□□□ 0.15
CCS-208ENST00000533244 TRAV41A0A0B4J266 112 aa16.01■□□□□ 0.15
CCS-208ENST00000533244 G3V318 75 aa16.01■□□□□ 0.15
CCS-208ENST00000533244 CA2P00918 260 aa16.01■□□□□ 0.15
CCS-208ENST00000533244 PSMB8P28062 276 aa16.01■□□□□ 0.15
CCS-208ENST00000533244 RFX2P48378 723 aa16.01■□□□□ 0.15
CCS-208ENST00000533244 SSBP2P81877 361 aaPredicted RBP16.01■□□□□ 0.15
CCS-208ENST00000533244 KHDC1LQ5JSQ8 128 aa16.01■□□□□ 0.15
CCS-208ENST00000533244 ZNF66Q6ZN08 573 aa16.01■□□□□ 0.15
CCS-208ENST00000533244 PPP1R27Q86WC6 154 aa16.01■□□□□ 0.15
CCS-208ENST00000533244 MINDY2Q8NBR6 621 aa16.01■□□□□ 0.15
CCS-208ENST00000533244 ZBTB34Q8NCN2 500 aa16.01■□□□□ 0.15
CCS-208ENST00000533244 OR5H2Q8NGV7 314 aa16.01■□□□□ 0.15
CCS-208ENST00000533244 OSR1Q8TAX0 266 aaPredicted RBP16.01■□□□□ 0.15
CCS-208ENST00000533244 SECTM1Q8WVN6 248 aa16.01■□□□□ 0.15
CCS-208ENST00000533244 WSB1Q9Y6I7 421 aa16.01■□□□□ 0.15
CCS-208ENST00000533244 CTDSP2O14595 271 aa16■□□□□ 0.15
CCS-208ENST00000533244 SHOXO15266 292 aa16■□□□□ 0.15
CCS-208ENST00000533244 NOL3O60936 208 aaKnown RBP16■□□□□ 0.15
CCS-208ENST00000533244 CRYZL1O95825 349 aa16■□□□□ 0.15
CCS-208ENST00000533244 IGLV1-40P01703 118 aa16■□□□□ 0.15
CCS-208ENST00000533244 PMP2P02689 132 aa16■□□□□ 0.15
CCS-208ENST00000533244 SLC6A1P30531 599 aa16■□□□□ 0.15
CCS-208ENST00000533244 RCVRNP35243 200 aa16■□□□□ 0.15
CCS-208ENST00000533244 BRWD1-AS2P59051 145 aa16■□□□□ 0.15
CCS-208ENST00000533244 LAX1Q8IWV1 398 aa16■□□□□ 0.15
CCS-208ENST00000533244 MFSD4AQ8N468 514 aa16■□□□□ 0.15
CCS-208ENST00000533244 MYOZ3Q8TDC0 251 aa16■□□□□ 0.15
CCS-208ENST00000533244 CLCC1Q96S66 551 aa16■□□□□ 0.15
CCS-208ENST00000533244 PRELID3BQ9Y3B1 194 aa16■□□□□ 0.15
CCS-208ENST00000533244 NUBP2Q9Y5Y2 271 aa16■□□□□ 0.15
CCS-208ENST00000533244 FCGR3BO75015 233 aa15.99■□□□□ 0.15
CCS-208ENST00000533244 RPLP1P05386 114 aaKnown RBP15.99■□□□□ 0.15
CCS-208ENST00000533244 HRH1P35367 487 aa15.99■□□□□ 0.15
CCS-208ENST00000533244 UBE2KP61086 200 aa15.99■□□□□ 0.15
CCS-208ENST00000533244 MRGPRG-AS1Q2M3A8 158 aa15.99■□□□□ 0.15
CCS-208ENST00000533244 CXorf66Q5JRM2 361 aaPredicted RBP15.99■□□□□ 0.15
CCS-208ENST00000533244 C18orf65Q6ZTR6 163 aa15.99■□□□□ 0.15
CCS-208ENST00000533244 MOB3AQ96BX8 217 aa15.99■□□□□ 0.15
CCS-208ENST00000533244 ABHD1Q96SE0 405 aa15.99■□□□□ 0.15
CCS-208ENST00000533244 SLIRPQ9GZT3 109 aaKnown RBP15.99■□□□□ 0.15
CCS-208ENST00000533244 SLC5A7Q9GZV3 580 aa15.99■□□□□ 0.15
CCS-208ENST00000533244 RBM38Q9H0Z9 239 aaKnown RBP15.99■□□□□ 0.15
CCS-208ENST00000533244 TAS2R8Q9NYW2 309 aa15.99■□□□□ 0.15
CCS-208ENST00000533244 ARPC1BO15143 372 aaKnown RBP15.98■□□□□ 0.15
CCS-208ENST00000533244 PF4V1P10720 104 aa15.98■□□□□ 0.15
CCS-208ENST00000533244 HLA-DMAP28067 261 aa15.98■□□□□ 0.15
CCS-208ENST00000533244 FXYD4P59646 89 aa15.98■□□□□ 0.15
CCS-208ENST00000533244 ETV3LQ6ZN32 361 aa15.98■□□□□ 0.15
CCS-208ENST00000533244 LCNL1Q6ZST4 164 aa15.98■□□□□ 0.15
CCS-208ENST00000533244 TCTEX1D1Q8N7M0 179 aa15.98■□□□□ 0.15
CCS-208ENST00000533244 TEX45Q8NA69 505 aa15.98■□□□□ 0.15
CCS-208ENST00000533244 TCTEX1D2Q8WW35 142 aa15.98■□□□□ 0.15
CCS-208ENST00000533244 ZNF2Q9BSG1 426 aaPredicted RBP15.98■□□□□ 0.15
CCS-208ENST00000533244 RGS5O15539 181 aa15.97■□□□□ 0.15
CCS-208ENST00000533244 SOX15O60248 233 aa15.97■□□□□ 0.15
CCS-208ENST00000533244 CDX1P47902 265 aaPredicted RBP15.97■□□□□ 0.15
CCS-208ENST00000533244 HERV-K104P61576 105 aa15.97■□□□□ 0.15
CCS-208ENST00000533244 PJVKQ0ZLH3 352 aa15.97■□□□□ 0.15
CCS-208ENST00000533244 VMA21Q3ZAQ7 101 aa15.97■□□□□ 0.15
CCS-208ENST00000533244 ZNF818PQ6ZRF7 136 aa15.97■□□□□ 0.15
CCS-208ENST00000533244 WFDC9Q8NEX5 89 aa15.97■□□□□ 0.15
CCS-208ENST00000533244 C15orf40Q8WUR7 153 aa15.97■□□□□ 0.15
CCS-208ENST00000533244 ARPC1AQ92747 370 aa15.97■□□□□ 0.15
CCS-208ENST00000533244 GPHA2Q96T91 129 aa15.97■□□□□ 0.15
CCS-208ENST00000533244 GNRHRP30968 328 aa15.96■□□□□ 0.15
CCS-208ENST00000533244 KIAA0141Q14154 515 aaPredicted RBP15.96■□□□□ 0.15
CCS-208ENST00000533244 ECSCRQ19T08 205 aa15.96■□□□□ 0.15
CCS-208ENST00000533244 AKIRIN2Q53H80 203 aa15.96■□□□□ 0.15
CCS-208ENST00000533244 OR2B11Q5JQS5 317 aa15.96■□□□□ 0.15
CCS-208ENST00000533244 TMEM17Q86X19 198 aa15.96■□□□□ 0.15
CCS-208ENST00000533244 ZNF695Q8IW36 515 aa15.96■□□□□ 0.15
CCS-208ENST00000533244 KLHL30-AS1Q8NEE0 82 aa15.96■□□□□ 0.15
CCS-208ENST00000533244 OR52I2Q8NH67 350 aa15.96■□□□□ 0.15
CCS-208ENST00000533244 OR4S2Q8NH73 311 aa15.96■□□□□ 0.15
CCS-208ENST00000533244 FAM103A1Q9BTL3 118 aaKnown RBP15.96■□□□□ 0.15
CCS-208ENST00000533244 NXF2Q9GZY0 626 aaKnown RBP15.96■□□□□ 0.15
CCS-208ENST00000533244 FXYD6Q9H0Q3 95 aa15.96■□□□□ 0.15
CCS-208ENST00000533244 KLK11Q9UBX7 282 aa15.96■□□□□ 0.15
CCS-208ENST00000533244 MTFP1Q9UDX5 166 aa15.96■□□□□ 0.15
CCS-208ENST00000533244 NOTCH3Q9UM47 2321 aa15.96■□□□□ 0.15
CCS-208ENST00000533244 TNCP24821 2201 aa15.96■□□□□ 0.14
CCS-208ENST00000533244 TNFSF12O43508 249 aa15.95■□□□□ 0.14
CCS-208ENST00000533244 SAA1P0DJI8 122 aaPredicted RBP15.95■□□□□ 0.14
CCS-208ENST00000533244 TMEM267Q0VDI3 215 aaPredicted RBP15.95■□□□□ 0.14
CCS-208ENST00000533244 FXYD3Q14802 87 aa15.95■□□□□ 0.14
CCS-208ENST00000533244 VAX1Q5SQQ9 334 aa15.95■□□□□ 0.14
CCS-208ENST00000533244 C8orf86Q6ZUL3 223 aa15.95■□□□□ 0.14
CCS-208ENST00000533244 OR6F1Q8NGZ6 308 aa15.95■□□□□ 0.14
CCS-208ENST00000533244 BORCS5Q969J3 196 aa15.95■□□□□ 0.14
CCS-208ENST00000533244 KLK15Q9H2R5 256 aa15.95■□□□□ 0.14
CCS-208ENST00000533244 FOXA2Q9Y261 457 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms