RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 CRYBA1P05813 215 aa6.74□□□□□ -1.33
NEDD8-207ENST00000533242 CEBPDP49716 269 aaPredicted RBP6.74□□□□□ -1.33
NEDD8-207ENST00000533242 PPT1P50897 306 aa6.74□□□□□ -1.33
NEDD8-207ENST00000533242 F2RL1P55085 397 aa6.74□□□□□ -1.33
NEDD8-207ENST00000533242 IL13RA2Q14627 380 aa6.74□□□□□ -1.33
NEDD8-207ENST00000533242 SPRNQ5BIV9 151 aa6.74□□□□□ -1.33
NEDD8-207ENST00000533242 DHRS7BQ6IAN0 325 aaPredicted RBP6.74□□□□□ -1.33
NEDD8-207ENST00000533242 Q6P435 159 aa6.74□□□□□ -1.33
NEDD8-207ENST00000533242 FAM122CQ6P4D5 195 aa6.74□□□□□ -1.33
NEDD8-207ENST00000533242 Q6ZRM9 215 aa6.74□□□□□ -1.33
NEDD8-207ENST00000533242 ZNF695Q8IW36 515 aa6.74□□□□□ -1.33
NEDD8-207ENST00000533242 FAM58AQ8N1B3 248 aa6.74□□□□□ -1.33
NEDD8-207ENST00000533242 PRR18Q8N4B5 295 aa6.74□□□□□ -1.33
NEDD8-207ENST00000533242 OR51H1Q8NH63 302 aa6.74□□□□□ -1.33
NEDD8-207ENST00000533242 IL1F10Q8WWZ1 152 aa6.74□□□□□ -1.33
NEDD8-207ENST00000533242 DCAF16Q9NXF7 216 aa6.74□□□□□ -1.33
NEDD8-207ENST00000533242 CACFD1Q9UGQ2 172 aa6.74□□□□□ -1.33
NEDD8-207ENST00000533242 SOX21Q9Y651 276 aaPredicted RBP6.74□□□□□ -1.33
NEDD8-207ENST00000533242 MEX3AA1L020 520 aaKnown RBP6.73□□□□□ -1.33
NEDD8-207ENST00000533242 CLPSL1A2RUU4 121 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 ANKRD30BLA7E2S9 258 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 NUDT19A8MXV4 375 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 SIRPB1O00241 398 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 HOXA3O43365 443 aaPredicted RBP6.73□□□□□ -1.33
NEDD8-207ENST00000533242 CST7O76096 145 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 IGKV1-39P01597 117 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 IGKV1D-39P04432 117 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 UCP1P25874 307 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 SNCAP37840 140 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 NKX2-1P43699 371 aaPredicted RBP6.73□□□□□ -1.33
NEDD8-207ENST00000533242 RND3P61587 244 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 PPP1CBP62140 327 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 GNG3P63215 75 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 EIF5AP63241 154 aaKnown RBP6.73□□□□□ -1.33
NEDD8-207ENST00000533242 PAX2Q02962 417 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 IL24Q13007 206 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 FBLN7Q53RD9 439 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 EIF5AL1Q6IS14 154 aaKnown RBP6.73□□□□□ -1.33
NEDD8-207ENST00000533242 ZNF880Q6PDB4 577 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 OR2C3Q8N628 320 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 ZNF565Q8N9K5 539 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 ZDHHC16Q969W1 377 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 C1RLQ9NZP8 487 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 IGHV3OR16-10A0A075B7F0 116 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 MDFIC2A0A1B0GVS7 189 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 H3BP45 60 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 SEC11BP0C7V7 166 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 PSG2P11465 335 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 ZNF44P15621 663 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 TNFRSF1AP19438 455 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 TNFSF4P23510 183 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 MDH2P40926 338 aaKnown RBP6.73□□□□□ -1.33
NEDD8-207ENST00000533242 PAX9P55771 341 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 CCL20P78556 96 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 RUNX1Q01196 453 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 SRSF7Q16629 238 aaKnown RBP eCLIP6.73□□□□□ -1.33
NEDD8-207ENST00000533242 AKIRIN2Q53H80 203 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 GPR157Q5UAW9 335 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 BTNL3Q6UXE8 466 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 TMEM182Q6ZP80 229 aaPredicted RBP6.73□□□□□ -1.33
NEDD8-207ENST00000533242 TMEM86BQ8N661 226 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 TMEM252Q8N6L7 170 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 TMEM217Q8N7C4 229 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 SCCPDHQ8NBX0 429 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 HIST1H2AAQ96QV6 131 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 FAM212BQ9NTI7 297 aaPredicted RBP6.73□□□□□ -1.33
NEDD8-207ENST00000533242 PRELID1Q9Y255 219 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 MPC1Q9Y5U8 109 aa6.73□□□□□ -1.33
NEDD8-207ENST00000533242 VWFP04275 2813 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 IGHV2-70DA0A0C4DH43 119 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 KIR2DS1A0A191URI9 304 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 FAM181BA6NEQ2 426 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 OR5B21A6NL26 309 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 K7N7A8 449 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 IFNL4K9M1U5 179 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 CDIPTO14735 213 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 SNAPINO95295 136 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 OR2H2O95918 312 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 WNT2P09544 360 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 PVALBP20472 110 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-207ENST00000533242 ATP6V0CP27449 155 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 KIR2DS4P43632 304 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 BPIFB3P59826 476 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 HLA-DRB3P79483 266 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 ID3Q02535 119 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 KIR2DS1Q14954 304 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 DEFB112Q30KQ8 113 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 ZNF573Q86YE8 665 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 H1FOOQ8IZA3 346 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-207ENST00000533242 SPAG16Q8N0X2 631 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 SSBP3Q9BWW4 388 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-207ENST00000533242 MSL2Q9HCI7 577 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 C19orf12Q9NSK7 152 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 TRAV40A0A0B4J280 105 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 J3QT63 122 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 CHST1O43916 411 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 TIMM8AO60220 97 aaPredicted RBP6.72□□□□□ -1.33
NEDD8-207ENST00000533242 TSPAN15O95858 294 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 VDAC1P21796 283 aa6.72□□□□□ -1.33
NEDD8-207ENST00000533242 F2RP25116 425 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms