RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 RBFOX3A6NFN3 312 aa9.19□□□□□ -0.94
COLCA1-203ENST00000532918 IL18BPO95998 194 aa9.19□□□□□ -0.94
COLCA1-203ENST00000532918 SNRPD3P62318 126 aaKnown RBP9.19□□□□□ -0.94
COLCA1-203ENST00000532918 LCN2P80188 198 aa9.19□□□□□ -0.94
COLCA1-203ENST00000532918 UBE2V2Q15819 145 aa9.19□□□□□ -0.94
COLCA1-203ENST00000532918 ZNF600Q6ZNG1 722 aa9.19□□□□□ -0.94
COLCA1-203ENST00000532918 C20orf204Q6ZNR8 217 aa9.19□□□□□ -0.94
COLCA1-203ENST00000532918 CRIPAKQ8N1N5 446 aa9.19□□□□□ -0.94
COLCA1-203ENST00000532918 OR10G8Q8NGN5 311 aa9.19□□□□□ -0.94
COLCA1-203ENST00000532918 MPDU1O75352 247 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 FAM90A1Q86YD7 464 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 LSM10Q969L4 123 aaKnown RBP9.18□□□□□ -0.94
COLCA1-203ENST00000532918 MGPP08493 103 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 MMP9P14780 707 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 TMEM33P57088 247 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 FUT5Q11128 374 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 NRIP2Q9BQI9 281 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 HSF4Q9ULV5 492 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 IGHV2OR16-5A0A0B4J2B6 119 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 OR5P3Q8WZ94 311 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 RHOVQ96L33 236 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 PAXXQ9BUH6 204 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 UNC13CQ8NB66 2214 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 NKX2-6A6NCS4 301 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 FAM181BA6NEQ2 426 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 MVDP53602 400 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 PSG9Q00887 426 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 MEF2CQ06413 473 aaPredicted RBP9.18□□□□□ -0.94
COLCA1-203ENST00000532918 OXLD1Q5BKU9 147 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 ERASQ7Z444 233 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 SGK494Q96LW2 274 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 TLNRD1Q9H1K6 362 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 IGHV3OR16-10A0A075B7F0 116 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 IGHV3-21A0A0B4J1V1 117 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 HMSDA8MTL9 139 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 SLC25A17O43808 307 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 PDE6DO43924 150 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 BTF3P20290 206 aaKnown RBP9.18□□□□□ -0.94
COLCA1-203ENST00000532918 NPBWR2P48146 333 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 ZXDCQ2QGD7 858 aaPredicted RBP9.18□□□□□ -0.94
COLCA1-203ENST00000532918 SNAI3Q3KNW1 292 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 C9orf106Q8NAJ2 232 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 OR4B1Q8NGF8 309 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 ABHD14BQ96IU4 210 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 UQCR10Q9UDW1 63 aa9.18□□□□□ -0.94
COLCA1-203ENST00000532918 UQCRFS1P47985 274 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 FXYD3Q14802 87 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 A0A1B0GV90 55 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 OR4C46A6NHA9 309 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 FAM74A7A6NL05 159 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 C17orf100A8MU93 164 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 ZNF250P15622 560 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 SPANXN1Q5VSR9 72 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 UBE2L6O14933 153 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 ZIC3O60481 467 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 HPXP02790 462 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 NPPCP23582 126 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 VAX1Q5SQQ9 334 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 MRPL30Q8TCC3 161 aaKnown RBP9.17□□□□□ -0.94
COLCA1-203ENST00000532918 QTRT1Q9BXR0 403 aaKnown RBP9.17□□□□□ -0.94
COLCA1-203ENST00000532918 TRBV5-5A0A0J9YX44 114 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 C11orf94C9JXX5 98 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 NPIPB6E9PJ23 425 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 MFNGO00587 321 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 ADAP1O75689 374 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 SLC35E3Q7Z769 313 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 MRPL24Q96A35 216 aaKnown RBP9.17□□□□□ -0.94
COLCA1-203ENST00000532918 TMEM204Q9BSN7 226 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 MRPL37Q9BZE1 423 aaKnown RBP9.17□□□□□ -0.94
COLCA1-203ENST00000532918 NCOR1P1Q9H4R4 102 aa9.17□□□□□ -0.94
COLCA1-203ENST00000532918 ZNF430Q9H8G1 570 aaPredicted RBP9.17□□□□□ -0.94
COLCA1-203ENST00000532918 ZNF236Q9UL36 1845 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 THBDP07204 575 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 NMUP48645 174 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 ZNF137PP52743 207 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 GBGT1Q8N5D6 347 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 OR8A1Q8NGG7 326 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 MYOZ3Q8TDC0 251 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 THY1P04216 161 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 FAM157CP0CG43 387 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 TIMP3P35625 211 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 NANOS3P60323 173 aaKnown RBP9.16□□□□□ -0.94
COLCA1-203ENST00000532918 DLK1P80370 383 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 PRSS22Q9GZN4 317 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 PEMTQ9UBM1 199 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 CACNA1CQ13936 2221 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 CTXND1A0A1B0GTU2 59 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 LINC00862A6NCI5 91 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 C19orf67A6NJJ6 358 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 TRGV3P03979 118 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 IGHV1-2P23083 117 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 HSPE1P61604 102 aaKnown RBP9.16□□□□□ -0.94
COLCA1-203ENST00000532918 IRF3Q14653 427 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 ZIC4Q8N9L1 334 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 OR1N2Q8NGR9 330 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 HDHD3Q9BSH5 251 aaPredicted RBP9.16□□□□□ -0.94
COLCA1-203ENST00000532918 KCNE5Q9UJ90 142 aa9.16□□□□□ -0.94
COLCA1-203ENST00000532918 IGKV1D-42A0A075B6H8 117 aa9.15□□□□□ -0.94
COLCA1-203ENST00000532918 CDKN1AP38936 164 aa9.15□□□□□ -0.94
COLCA1-203ENST00000532918 EWSR1Q01844 656 aaKnown RBP eCLIP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms