RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 OPN1MW2P0DN77 364 aa15.59■□□□□ 0.09
CPSF1-209ENST00000532725 OPN1MW3P0DN78 364 aa15.59■□□□□ 0.09
CPSF1-209ENST00000532725 EGR2P11161 476 aaPredicted RBP15.59■□□□□ 0.09
CPSF1-209ENST00000532725 RCVRNP35243 200 aa15.59■□□□□ 0.09
CPSF1-209ENST00000532725 FXYD4P59646 89 aa15.59■□□□□ 0.09
CPSF1-209ENST00000532725 PLGLAQ15195 96 aa15.59■□□□□ 0.09
CPSF1-209ENST00000532725 TEX38Q6PEX7 206 aa15.59■□□□□ 0.09
CPSF1-209ENST00000532725 ZNF562Q6V9R5 426 aa15.59■□□□□ 0.09
CPSF1-209ENST00000532725 ZNF66Q6ZN08 573 aa15.59■□□□□ 0.09
CPSF1-209ENST00000532725 FAM110DQ8TAY7 271 aaPredicted RBP15.59■□□□□ 0.09
CPSF1-209ENST00000532725 CLCC1Q96S66 551 aa15.59■□□□□ 0.09
CPSF1-209ENST00000532725 GPHA2Q96T91 129 aa15.59■□□□□ 0.09
CPSF1-209ENST00000532725 ZNF2Q9BSG1 426 aaPredicted RBP15.59■□□□□ 0.09
CPSF1-209ENST00000532725 MTFP1Q9UDX5 166 aa15.59■□□□□ 0.09
CPSF1-209ENST00000532725 RSL24D1Q9UHA3 163 aaKnown RBP15.59■□□□□ 0.09
CPSF1-209ENST00000532725 PRELID3BQ9Y3B1 194 aa15.59■□□□□ 0.09
CPSF1-209ENST00000532725 CMYA5Q8N3K9 4069 aa15.58■□□□□ 0.09
CPSF1-209ENST00000532725 ZNF701M0R085 212 aaPredicted RBP15.58■□□□□ 0.08
CPSF1-209ENST00000532725 SHOXO15266 292 aa15.58■□□□□ 0.08
CPSF1-209ENST00000532725 ATP6V0E1O15342 81 aa15.58■□□□□ 0.08
CPSF1-209ENST00000532725 FCGR3BO75015 233 aa15.58■□□□□ 0.08
CPSF1-209ENST00000532725 CRYZL1O95825 349 aa15.58■□□□□ 0.08
CPSF1-209ENST00000532725 PPIFP30405 207 aaKnown RBP15.58■□□□□ 0.08
CPSF1-209ENST00000532725 GNRHRP30968 328 aa15.58■□□□□ 0.08
CPSF1-209ENST00000532725 NDPQ00604 133 aa15.58■□□□□ 0.08
CPSF1-209ENST00000532725 CBX3Q13185 183 aa15.58■□□□□ 0.08
CPSF1-209ENST00000532725 KCTD9Q7L273 389 aa15.58■□□□□ 0.08
CPSF1-209ENST00000532725 OR6F1Q8NGZ6 308 aa15.58■□□□□ 0.08
CPSF1-209ENST00000532725 MOB3AQ96BX8 217 aa15.58■□□□□ 0.08
CPSF1-209ENST00000532725 DIRAS2Q96HU8 199 aa15.58■□□□□ 0.08
CPSF1-209ENST00000532725 HARBI1Q96MB7 349 aa15.58■□□□□ 0.08
CPSF1-209ENST00000532725 C6orf62Q9GZU0 229 aaPredicted RBP15.58■□□□□ 0.08
CPSF1-209ENST00000532725 TPSG1Q9NRR2 321 aa15.58■□□□□ 0.08
CPSF1-209ENST00000532725 TAS2R8Q9NYW2 309 aa15.58■□□□□ 0.08
CPSF1-209ENST00000532725 FBXO7Q9Y3I1 522 aa15.58■□□□□ 0.08
CPSF1-209ENST00000532725 WSB1Q9Y6I7 421 aa15.58■□□□□ 0.08
CPSF1-209ENST00000532725 A0A1W2PRX2 142 aa15.57■□□□□ 0.08
CPSF1-209ENST00000532725 G3V318 75 aa15.57■□□□□ 0.08
CPSF1-209ENST00000532725 IGHG4P01861 327 aa15.57■□□□□ 0.08
CPSF1-209ENST00000532725 CRIP2P52943 208 aaPredicted RBP15.57■□□□□ 0.08
CPSF1-209ENST00000532725 RNASE12Q5GAN4 147 aaKnown RBP15.57■□□□□ 0.08
CPSF1-209ENST00000532725 ZNF818PQ6ZRF7 136 aa15.57■□□□□ 0.08
CPSF1-209ENST00000532725 PPP1R27Q86WC6 154 aa15.57■□□□□ 0.08
CPSF1-209ENST00000532725 RNF152Q8N8N0 203 aa15.57■□□□□ 0.08
CPSF1-209ENST00000532725 MCFD2Q8NI22 146 aa15.57■□□□□ 0.08
CPSF1-209ENST00000532725 OSR1Q8TAX0 266 aaPredicted RBP15.57■□□□□ 0.08
CPSF1-209ENST00000532725 FCAMRQ8WWV6 532 aa15.57■□□□□ 0.08
CPSF1-209ENST00000532725 PARP11Q9NR21 331 aa15.57■□□□□ 0.08
CPSF1-209ENST00000532725 NUBP2Q9Y5Y2 271 aa15.57■□□□□ 0.08
CPSF1-209ENST00000532725 TNFSF12O43508 249 aa15.56■□□□□ 0.08
CPSF1-209ENST00000532725 ELANEP08246 267 aa15.56■□□□□ 0.08
CPSF1-209ENST00000532725 VDAC1P21796 283 aa15.56■□□□□ 0.08
CPSF1-209ENST00000532725 TNFSF8P32971 234 aa15.56■□□□□ 0.08
CPSF1-209ENST00000532725 HERV-K104P61576 105 aa15.56■□□□□ 0.08
CPSF1-209ENST00000532725 PJVKQ0ZLH3 352 aa15.56■□□□□ 0.08
CPSF1-209ENST00000532725 FOXE3Q13461 319 aa15.56■□□□□ 0.08
CPSF1-209ENST00000532725 MRGPRG-AS1Q2M3A8 158 aa15.56■□□□□ 0.08
CPSF1-209ENST00000532725 VAX1Q5SQQ9 334 aa15.56■□□□□ 0.08
CPSF1-209ENST00000532725 TMEM17Q86X19 198 aa15.56■□□□□ 0.08
CPSF1-209ENST00000532725 TEX45Q8NA69 505 aa15.56■□□□□ 0.08
CPSF1-209ENST00000532725 MINDY2Q8NBR6 621 aa15.56■□□□□ 0.08
CPSF1-209ENST00000532725 TCTEX1D2Q8WW35 142 aa15.56■□□□□ 0.08
CPSF1-209ENST00000532725 SOSTQ9BQB4 213 aa15.56■□□□□ 0.08
CPSF1-209ENST00000532725 ZFP57Q9NU63 452 aa15.56■□□□□ 0.08
CPSF1-209ENST00000532725 RABL2AQ9UBK7 228 aaPredicted RBP15.56■□□□□ 0.08
CPSF1-209ENST00000532725 RABL2BQ9UNT1 228 aa15.56■□□□□ 0.08
CPSF1-209ENST00000532725 TRAV41A0A0B4J266 112 aa15.55■□□□□ 0.08
CPSF1-209ENST00000532725 GABARAPH6UMI1 98 aa15.55■□□□□ 0.08
CPSF1-209ENST00000532725 CA2P00918 260 aa15.55■□□□□ 0.08
CPSF1-209ENST00000532725 UBE2KP61086 200 aa15.55■□□□□ 0.08
CPSF1-209ENST00000532725 TSPAN5P62079 268 aa15.55■□□□□ 0.08
CPSF1-209ENST00000532725 RPL23AP62750 156 aaKnown RBP15.55■□□□□ 0.08
CPSF1-209ENST00000532725 SSBP2P81877 361 aaPredicted RBP15.55■□□□□ 0.08
CPSF1-209ENST00000532725 DGCR2P98153 550 aa15.55■□□□□ 0.08
CPSF1-209ENST00000532725 C19orf54Q5BKX5 351 aa15.55■□□□□ 0.08
CPSF1-209ENST00000532725 OR2B11Q5JQS5 317 aa15.55■□□□□ 0.08
CPSF1-209ENST00000532725 PYHIN1Q6K0P9 492 aa15.55■□□□□ 0.08
CPSF1-209ENST00000532725 OR4F17Q8NGA8 305 aa15.55■□□□□ 0.08
CPSF1-209ENST00000532725 R3HDM4Q96D70 268 aa15.55■□□□□ 0.08
CPSF1-209ENST00000532725 OR4F4Q96R69 305 aa15.55■□□□□ 0.08
CPSF1-209ENST00000532725 DCUN1D5Q9BTE7 237 aa15.55■□□□□ 0.08
CPSF1-209ENST00000532725 TNCP24821 2201 aa15.54■□□□□ 0.08
CPSF1-209ENST00000532725 ARPC1BO15143 372 aaKnown RBP15.54■□□□□ 0.08
CPSF1-209ENST00000532725 CTDSPLO15194 276 aa15.54■□□□□ 0.08
CPSF1-209ENST00000532725 IGLV1-40P01703 118 aa15.54■□□□□ 0.08
CPSF1-209ENST00000532725 RPLP1P05386 114 aaKnown RBP15.54■□□□□ 0.08
CPSF1-209ENST00000532725 PSMB8P28062 276 aa15.54■□□□□ 0.08
CPSF1-209ENST00000532725 MRPS10P82664 201 aaKnown RBP15.54■□□□□ 0.08
CPSF1-209ENST00000532725 FXYD3Q14802 87 aa15.54■□□□□ 0.08
CPSF1-209ENST00000532725 VMA21Q3ZAQ7 101 aa15.54■□□□□ 0.08
CPSF1-209ENST00000532725 ACTBL2Q562R1 376 aa15.54■□□□□ 0.08
CPSF1-209ENST00000532725 LCNL1Q6ZST4 164 aa15.54■□□□□ 0.08
CPSF1-209ENST00000532725 M0QYG6 137 aa15.53■□□□□ 0.08
CPSF1-209ENST00000532725 CD3DP04234 171 aa15.53■□□□□ 0.08
CPSF1-209ENST00000532725 SSBP1Q04837 148 aaKnown RBP15.53■□□□□ 0.08
CPSF1-209ENST00000532725 TMEM267Q0VDI3 215 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-209ENST00000532725 IL18Q14116 193 aa15.53■□□□□ 0.08
CPSF1-209ENST00000532725 AKIRIN2Q53H80 203 aa15.53■□□□□ 0.08
CPSF1-209ENST00000532725 CXorf66Q5JRM2 361 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-209ENST00000532725 KHDC1LQ5JSQ8 128 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms