RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 OR5H8P0DN80 308 aa13.78□□□□□ -0.2
SMG1-203ENST00000532700 MC5RP33032 325 aa13.78□□□□□ -0.2
SMG1-203ENST00000532700 DEFA5Q01523 94 aa13.78□□□□□ -0.2
SMG1-203ENST00000532700 PLGLAQ15195 96 aa13.78□□□□□ -0.2
SMG1-203ENST00000532700 TMEM69Q5SWH9 247 aa13.78□□□□□ -0.2
SMG1-203ENST00000532700 ZNF660Q6AZW8 331 aaPredicted RBP13.78□□□□□ -0.2
SMG1-203ENST00000532700 OR5M8Q8NGP6 311 aa13.78□□□□□ -0.2
SMG1-203ENST00000532700 MCRIP2Q9BUT9 160 aaKnown RBP13.78□□□□□ -0.2
SMG1-203ENST00000532700 ZNF221Q9UK13 617 aa13.78□□□□□ -0.2
SMG1-203ENST00000532700 SRRM4A7MD48 611 aaKnown RBP13.77□□□□□ -0.21
SMG1-203ENST00000532700 SEC14L6B5MCN3 397 aa13.77□□□□□ -0.21
SMG1-203ENST00000532700 CRYGBP07316 175 aa13.77□□□□□ -0.21
SMG1-203ENST00000532700 CTXN2P0C2S0 81 aa13.77□□□□□ -0.21
SMG1-203ENST00000532700 CBX5P45973 191 aa13.77□□□□□ -0.21
SMG1-203ENST00000532700 SLURP1P55000 103 aa13.77□□□□□ -0.21
SMG1-203ENST00000532700 RPS16P62249 146 aaKnown RBP13.77□□□□□ -0.21
SMG1-203ENST00000532700 RUNX1Q01196 453 aa13.77□□□□□ -0.21
SMG1-203ENST00000532700 SPCS2Q15005 226 aa13.77□□□□□ -0.21
SMG1-203ENST00000532700 TMEM65Q6PI78 240 aa13.77□□□□□ -0.21
SMG1-203ENST00000532700 PPP1R27Q86WC6 154 aa13.77□□□□□ -0.21
SMG1-203ENST00000532700 LFNGQ8NES3 379 aa13.77□□□□□ -0.21
SMG1-203ENST00000532700 OR1N2Q8NGR9 330 aa13.77□□□□□ -0.21
SMG1-203ENST00000532700 ABHD5Q8WTS1 349 aa13.77□□□□□ -0.21
SMG1-203ENST00000532700 MS4A10Q96PG2 267 aa13.77□□□□□ -0.21
SMG1-203ENST00000532700 GINS4Q9BRT9 223 aa13.77□□□□□ -0.21
SMG1-203ENST00000532700 SLC35D1Q9NTN3 355 aa13.77□□□□□ -0.21
SMG1-203ENST00000532700 FOXA2Q9Y261 457 aaPredicted RBP13.77□□□□□ -0.21
SMG1-203ENST00000532700 VSIG4Q9Y279 399 aa13.77□□□□□ -0.21
SMG1-203ENST00000532700 IGHV4OR15-8A0A075B7B6 117 aa13.76□□□□□ -0.21
SMG1-203ENST00000532700 A0A087WW49 117 aa13.76□□□□□ -0.21
SMG1-203ENST00000532700 SSX5O60225 188 aa13.76□□□□□ -0.21
SMG1-203ENST00000532700 RBBP9O75884 186 aa13.76□□□□□ -0.21
SMG1-203ENST00000532700 IGHV3-11P01762 117 aa13.76□□□□□ -0.21
SMG1-203ENST00000532700 DGCR2P98153 550 aa13.76□□□□□ -0.21
SMG1-203ENST00000532700 H1FOOQ8IZA3 346 aaPredicted RBP13.76□□□□□ -0.21
SMG1-203ENST00000532700 DCUN1D4Q92564 292 aa13.76□□□□□ -0.21
SMG1-203ENST00000532700 DPF1Q92782 380 aa13.76□□□□□ -0.21
SMG1-203ENST00000532700 LINC00473A8K010 186 aa13.75□□□□□ -0.21
SMG1-203ENST00000532700 J3QRK9 145 aa13.75□□□□□ -0.21
SMG1-203ENST00000532700 EIF4EP06730 217 aaKnown RBP13.75□□□□□ -0.21
SMG1-203ENST00000532700 TAS2R20P59543 309 aa13.75□□□□□ -0.21
SMG1-203ENST00000532700 ZNF616Q08AN1 781 aa13.75□□□□□ -0.21
SMG1-203ENST00000532700 CNIH2Q6PI25 160 aa13.75□□□□□ -0.21
SMG1-203ENST00000532700 UNQ5815/PRO19632Q6UWF5 114 aa13.75□□□□□ -0.21
SMG1-203ENST00000532700 PDPNQ86YL7 162 aa13.75□□□□□ -0.21
SMG1-203ENST00000532700 BVESQ8NE79 360 aa13.75□□□□□ -0.21
SMG1-203ENST00000532700 GRPEL2Q8TAA5 225 aa13.75□□□□□ -0.21
SMG1-203ENST00000532700 DDB2Q92466 427 aa13.75□□□□□ -0.21
SMG1-203ENST00000532700 DLX4Q92988 240 aaPredicted RBP13.75□□□□□ -0.21
SMG1-203ENST00000532700 ISOC1Q96CN7 298 aa13.75□□□□□ -0.21
SMG1-203ENST00000532700 GPR61Q9BZJ8 451 aa13.75□□□□□ -0.21
SMG1-203ENST00000532700 ANXA10Q9UJ72 324 aa13.75□□□□□ -0.21
SMG1-203ENST00000532700 LSM4Q9Y4Z0 139 aaKnown RBP13.75□□□□□ -0.21
SMG1-203ENST00000532700 CCDC160A6NGH7 325 aa13.74□□□□□ -0.21
SMG1-203ENST00000532700 FAM25AB3EWG3 89 aa13.74□□□□□ -0.21
SMG1-203ENST00000532700 FAM25CB3EWG5 89 aa13.74□□□□□ -0.21
SMG1-203ENST00000532700 FAM25GB3EWG6 89 aa13.74□□□□□ -0.21
SMG1-203ENST00000532700 HPGDSO60760 199 aa13.74□□□□□ -0.21
SMG1-203ENST00000532700 RBMXL2O75526 392 aaKnown RBP13.74□□□□□ -0.21
SMG1-203ENST00000532700 ELK1P19419 428 aa13.74□□□□□ -0.21
SMG1-203ENST00000532700 ECI1P42126 302 aa13.74□□□□□ -0.21
SMG1-203ENST00000532700 ACTBL2Q562R1 376 aa13.74□□□□□ -0.21
SMG1-203ENST00000532700 C9orf66Q5T8R8 295 aa13.74□□□□□ -0.21
SMG1-203ENST00000532700 ZNF562Q6V9R5 426 aa13.74□□□□□ -0.21
SMG1-203ENST00000532700 HOGA1Q86XE5 327 aa13.74□□□□□ -0.21
SMG1-203ENST00000532700 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.74□□□□□ -0.21
SMG1-203ENST00000532700 BEST4Q8NFU0 473 aa13.74□□□□□ -0.21
SMG1-203ENST00000532700 ARPC1AQ92747 370 aa13.74□□□□□ -0.21
SMG1-203ENST00000532700 RNF5Q99942 180 aa13.74□□□□□ -0.21
SMG1-203ENST00000532700 CCDC59Q9P031 241 aaKnown RBP13.74□□□□□ -0.21
SMG1-203ENST00000532700 CEPT1Q9Y6K0 416 aa13.74□□□□□ -0.21
SMG1-203ENST00000532700 IGKV1D-13A0A0B4J2D9 117 aa13.73□□□□□ -0.21
SMG1-203ENST00000532700 H3BMQ9 156 aa13.73□□□□□ -0.21
SMG1-203ENST00000532700 SPDEFO95238 335 aa13.73□□□□□ -0.21
SMG1-203ENST00000532700 IGLV2-14P01704 120 aa13.73□□□□□ -0.21
SMG1-203ENST00000532700 APOA2P02652 100 aa13.73□□□□□ -0.21
SMG1-203ENST00000532700 LGALS1P09382 135 aaKnown RBP13.73□□□□□ -0.21
SMG1-203ENST00000532700 IGKV1-13P0DP09 117 aa13.73□□□□□ -0.21
SMG1-203ENST00000532700 PTHLHP12272 177 aa13.73□□□□□ -0.21
SMG1-203ENST00000532700 PRSS3P35030 304 aa13.73□□□□□ -0.21
SMG1-203ENST00000532700 ARPC4P59998 168 aa13.73□□□□□ -0.21
SMG1-203ENST00000532700 FXYD3Q14802 87 aa13.73□□□□□ -0.21
SMG1-203ENST00000532700 DYNC2LI1Q8TCX1 351 aa13.73□□□□□ -0.21
SMG1-203ENST00000532700 FLYWCH2Q96CP2 140 aaKnown RBP13.73□□□□□ -0.21
SMG1-203ENST00000532700 TSNAXQ99598 290 aaKnown RBP13.73□□□□□ -0.21
SMG1-203ENST00000532700 B9D2Q9BPU9 175 aa13.73□□□□□ -0.21
SMG1-203ENST00000532700 IFT46Q9NQC8 304 aa13.73□□□□□ -0.21
SMG1-203ENST00000532700 MRPS7Q9Y2R9 242 aaKnown RBP13.73□□□□□ -0.21
SMG1-203ENST00000532700 RBM7Q9Y580 266 aaKnown RBP13.73□□□□□ -0.21
SMG1-203ENST00000532700 OR8U8P0C7N1 319 aa13.72□□□□□ -0.21
SMG1-203ENST00000532700 APELAP0DMC3 54 aa13.72□□□□□ -0.21
SMG1-203ENST00000532700 NFYAP23511 347 aaPredicted RBP13.72□□□□□ -0.21
SMG1-203ENST00000532700 DUTP33316 252 aaKnown RBP13.72□□□□□ -0.21
SMG1-203ENST00000532700 AKIRIN2Q53H80 203 aa13.72□□□□□ -0.21
SMG1-203ENST00000532700 TMEM177Q53S58 311 aa13.72□□□□□ -0.21
SMG1-203ENST00000532700 IDO2Q6ZQW0 420 aa13.72□□□□□ -0.21
SMG1-203ENST00000532700 HAPLN4Q86UW8 402 aa13.72□□□□□ -0.21
SMG1-203ENST00000532700 HARBI1Q96MB7 349 aa13.72□□□□□ -0.21
SMG1-203ENST00000532700 ADAM30Q9UKF2 790 aa13.72□□□□□ -0.21
SMG1-203ENST00000532700 RGS5O15539 181 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms