RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 PMAIP1Q13794 54 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 KRTAP25-1Q3LHN0 102 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 SDIM1Q6ZPB5 146 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 CALHM3Q86XJ0 350 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 LHFPL5Q8TAF8 219 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 CEP19Q96LK0 163 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 CCL13Q99616 98 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 NKX6-2Q9C056 277 aaPredicted RBP2.41□□□□□ -2.02
USP47-211ENST00000531513 ABCG5Q9H222 651 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 C11orf1Q9H5F2 150 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 ASF1BQ9NVP2 202 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 GLTPQ9NZD2 209 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 COQ4Q9Y3A0 265 aa2.41□□□□□ -2.02
USP47-211ENST00000531513 GRIN2BQ13224 1484 aa2.4□□□□□ -2.02
USP47-211ENST00000531513 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.4□□□□□ -2.02
USP47-211ENST00000531513 IGHV1-69-2A0A0G2JMI3 117 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 OR6C6A6NF89 314 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 OR2B3O76000 313 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 CPSF4O95639 269 aaKnown RBP2.4□□□□□ -2.03
USP47-211ENST00000531513 SERPINA1P01009 418 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 OR4E1P0C645 316 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 FAM228BP0C875 321 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 ESDP10768 282 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 NPPCP23582 126 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 TSPEAR-AS2P59090 65 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 SARNPP82979 210 aaKnown RBP2.4□□□□□ -2.03
USP47-211ENST00000531513 ACOT6Q3I5F7 207 aaPredicted RBP2.4□□□□□ -2.03
USP47-211ENST00000531513 AMMECR1LQ6DCA0 310 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 UMODL1-AS1Q8N2C9 162 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 OR4K13Q8NH42 304 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 MUC7Q8TAX7 377 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 AP3S1Q92572 193 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 DGCR14Q96DF8 476 aaKnown RBP2.4□□□□□ -2.03
USP47-211ENST00000531513 GNPNAT1Q96EK6 184 aaPredicted RBP2.4□□□□□ -2.03
USP47-211ENST00000531513 OR52E6Q96RD3 313 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 PRRT1Q99946 306 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 FBXO5Q9UKT4 447 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 COL18A1P39060 1754 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 NCOA1Q15788 1441 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 PTPRJQ12913 1337 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 ZBED9Q6R2W3 1325 aa2.4□□□□□ -2.03
USP47-211ENST00000531513 EIF3AQ14152 1382 aaKnown RBP2.39□□□□□ -2.03
USP47-211ENST00000531513 PQLC2LA1A4F0 135 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 INMT-MINDY4F8WBC2 141 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 H3BQV1 296 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 PSMD12O00232 456 aaPredicted RBP2.39□□□□□ -2.03
USP47-211ENST00000531513 SLC17A3O00476 420 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 COX7A2LO14548 114 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 POLR2GP62487 172 aaKnown RBP eCLIP2.39□□□□□ -2.03
USP47-211ENST00000531513 TNFAIP6P98066 277 aaPredicted RBP2.39□□□□□ -2.03
USP47-211ENST00000531513 EDDM3AQ14507 147 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 ZNF141Q15928 474 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 IGFBP7Q16270 282 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 RASL11AQ6T310 242 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 TMED4Q7Z7H5 227 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 LYPD6Q86Y78 171 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.39□□□□□ -2.03
USP47-211ENST00000531513 PXT1Q8NFP0 134 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 OR11H1Q8NG94 326 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 OR10A6Q8NH74 314 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 FNDC9Q8TBE3 224 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 C12orf43Q96C57 262 aaKnown RBP2.39□□□□□ -2.03
USP47-211ENST00000531513 BTF3L4Q96K17 158 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 CXorf21Q9HAI6 301 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 VPREB3Q9UKI3 123 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 SNX12Q9UMY4 172 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 MMACHCQ9Y4U1 282 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 DCCP43146 1447 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 ZNF532Q9HCE3 1301 aa2.39□□□□□ -2.03
USP47-211ENST00000531513 NID2Q14112 1375 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 DHRS12A0PJE2 317 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 PGRMC1O00264 195 aaKnown RBP2.38□□□□□ -2.03
USP47-211ENST00000531513 SYNGR2O43760 224 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 PCF11O94913 1555 aaKnown RBP2.38□□□□□ -2.03
USP47-211ENST00000531513 HAND1O96004 215 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 FABP1P07148 127 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 HRES1P13985 223 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 SLC25A16P16260 332 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 ZNF22P17026 224 aaPredicted RBP2.38□□□□□ -2.03
USP47-211ENST00000531513 CRYBB3P26998 211 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 GNG10P50151 68 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 ZNF140P52738 457 aaPredicted RBP2.38□□□□□ -2.03
USP47-211ENST00000531513 PSME3P61289 254 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 FABP9Q0Z7S8 132 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 TMEM97Q5BJF2 176 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 AMTNQ6UX39 209 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 AKAP14Q86UN6 197 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 ZNF664Q8N3J9 261 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 SLC22A24Q8N4F4 322 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 ZNF561Q8N587 486 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 OR10P1Q8NGE3 313 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 OR2T4Q8NH00 348 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 RAB2BQ8WUD1 216 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 DCUN1D1Q96GG9 259 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 MND1Q9BWT6 205 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 FAM96AQ9H5X1 160 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 PAQR5Q9NXK6 330 aaPredicted RBP2.38□□□□□ -2.03
USP47-211ENST00000531513 TAAR3PQ9P1P4 343 aa2.38□□□□□ -2.03
USP47-211ENST00000531513 KLK5Q9Y337 293 aaPredicted RBP2.38□□□□□ -2.03
USP47-211ENST00000531513 ZCCHC6Q5VYS8 1495 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms