RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 CA11O75493 328 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 OR2C1O95371 312 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 IGLV2-23P01705 113 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 LINC00205P59089 165 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 EFNB1P98172 346 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 HMGN3Q15651 99 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 FAM209BQ5JX69 171 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 C12orf73Q69YU5 71 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 RAB12Q6IQ22 244 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 ZNF529Q6P280 563 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 Q6ZRM9 215 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 NR2C2APQ86WQ0 139 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 PDPNQ86YL7 162 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 SYT8Q8NBV8 401 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 NUDT10Q8NFP7 164 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 MRPL30Q8TCC3 161 aaKnown RBP5.98□□□□□ -1.45
CD44-232ENST00000531118 CD300LFQ8TDQ1 290 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 DNAJC9Q8WXX5 260 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 NUDT11Q96G61 164 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 ABHD14BQ96IU4 210 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 IL4I1Q96RQ9 567 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 KCNIP1Q9NZI2 227 aa5.98□□□□□ -1.45
CD44-232ENST00000531118 MPTX1A8MV57 137 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 SLC16A6O15403 523 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 MPPED1O15442 326 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 OR2J3O76001 311 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 APOA2P02652 100 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 CRYGBP07316 175 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 SCTP09683 121 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 RBMY1A1P0DJD3 496 aaKnown RBP5.97□□□□□ -1.45
CD44-232ENST00000531118 INAFM2P0DMQ5 153 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 GTF2F2P13984 249 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 HLA-DMBP28068 263 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 ARL3P36405 182 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 MRGPRG-AS1Q2M3A8 158 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 C15orf32Q32M92 178 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 SLC22A6Q4U2R8 563 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 DDI2Q5TDH0 399 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 OR4A47Q6IF82 309 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 GPHB5Q86YW7 130 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 ADGRG5Q8IZF4 528 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 ZNF383Q8NA42 475 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 Q8NAQ8 132 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 DRAXINQ8NBI3 349 aaPredicted RBP5.97□□□□□ -1.45
CD44-232ENST00000531118 OR5B3Q8NH48 314 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 CANT1Q8WVQ1 401 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 SRSF12Q8WXF0 261 aaKnown RBP5.97□□□□□ -1.45
CD44-232ENST00000531118 SLC7A6OSQ96CW6 309 aaPredicted RBP5.97□□□□□ -1.45
CD44-232ENST00000531118 PAK1IP1Q9NWT1 392 aaPredicted RBP5.97□□□□□ -1.45
CD44-232ENST00000531118 STEAP1Q9UHE8 339 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 POMPQ9Y244 141 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 GMPPBQ9Y5P6 360 aa5.97□□□□□ -1.45
CD44-232ENST00000531118 UBE2QL1A1L167 161 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 ZNF320A2RRD8 509 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 FAM90A7PA6NKC0 464 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 ZAR1LA6NP61 321 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 EPM2AB3EWF7 344 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 TSPAN4O14817 238 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 ZNF780AO75290 641 aaPredicted RBP5.96□□□□□ -1.46
CD44-232ENST00000531118 FKBP6O75344 327 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 CIB2O75838 187 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 IGHV3-23P01764 117 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 C8orf88P0DMB2 117 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 HOXA5P20719 270 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 ATP6V1E1P36543 226 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 SLC25A30Q5SVS4 291 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 C1orf134Q5TEV5 83 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 NECAP1Q8NC96 275 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 OR4A5Q8NH83 315 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 MARC2Q969Z3 335 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 GALMQ96C23 342 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 NRBF2Q96F24 287 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 HARBI1Q96MB7 349 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 S100A13Q99584 98 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 C6orf62Q9GZU0 229 aaPredicted RBP5.96□□□□□ -1.46
CD44-232ENST00000531118 CSTL1Q9H114 145 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 SLC35D1Q9NTN3 355 aa5.96□□□□□ -1.46
CD44-232ENST00000531118 EXOSC1Q9Y3B2 195 aaKnown RBP5.96□□□□□ -1.46
CD44-232ENST00000531118 TCRBV3S1A0A5B6 114 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 TMEM212A6NML5 194 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 GPX5O75715 221 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 CA1P00915 261 aaPredicted RBP5.95□□□□□ -1.46
CD44-232ENST00000531118 CD74P04233 296 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 RBMY1CP0DJD4 496 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 FCGR1AP12314 374 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 ZNF93P35789 620 aaPredicted RBP5.95□□□□□ -1.46
CD44-232ENST00000531118 CAPGP40121 348 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 TNXAQ16473 311 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 FAM106AQ4KMX7 169 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 C1orf146Q5VVC0 180 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 GLT8D1Q68CQ7 371 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 UNQ9165/PRO28630Q6UXU0 137 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 C19orf35Q6ZS72 473 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 UBE2DNLQ8IWF7 75 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 C10orf67Q8IYJ2 551 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 OR13C5Q8NGS8 318 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 IL1F10Q8WWZ1 152 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 C4orf36Q96KX1 117 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 C18orf15Q96N68 181 aa5.95□□□□□ -1.46
CD44-232ENST00000531118 AGMATQ9BSE5 352 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms