RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 DDB2Q92466 427 aa14.67□□□□□ -0.06
GMDS-208ENST00000530927 FAM103A1Q9BTL3 118 aaKnown RBP14.67□□□□□ -0.06
GMDS-208ENST00000530927 OR51J1Q9H342 316 aa14.67□□□□□ -0.06
GMDS-208ENST00000530927 PLXNB1O43157 2135 aa14.67□□□□□ -0.06
GMDS-208ENST00000530927 SLC25A17O43808 307 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 TUSC2O75896 110 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 IGF1P05019 195 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 CTXN2P0C2S0 81 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 RPL23AP62750 156 aaKnown RBP14.66□□□□□ -0.06
GMDS-208ENST00000530927 RPL30P62888 115 aaKnown RBP14.66□□□□□ -0.06
GMDS-208ENST00000530927 SLC35B1P78383 322 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 ZNF79Q15937 498 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 PYDC2Q56P42 97 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 OR2B11Q5JQS5 317 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 C8orf86Q6ZUL3 223 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 OR4F17Q8NGA8 305 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 FLYWCH2Q96CP2 140 aaKnown RBP14.66□□□□□ -0.06
GMDS-208ENST00000530927 DUX3Q96PT4 197 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 OR4F4Q96R69 305 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 WDR12Q9GZL7 423 aaKnown RBP14.66□□□□□ -0.06
GMDS-208ENST00000530927 AKIP1Q9NQ31 210 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 IFT46Q9NQC8 304 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 NOTCH1P46531 2555 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 SRRM4A7MD48 611 aaKnown RBP14.66□□□□□ -0.06
GMDS-208ENST00000530927 GSTZ1O43708 216 aaPredicted RBP14.66□□□□□ -0.06
GMDS-208ENST00000530927 RBBP9O75884 186 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 CA2P00918 260 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 PF4V1P10720 104 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 EGR2P11161 476 aaPredicted RBP14.66□□□□□ -0.06
GMDS-208ENST00000530927 VDAC1P21796 283 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 FCGR2CP31995 323 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 THBS3P49746 956 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 CX3CL1P78423 397 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 PJVKQ0ZLH3 352 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 ZNF846Q147U1 533 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 ZNF645Q8N7E2 425 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 OR52I2Q8NH67 350 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 CASTOR1Q8WTX7 329 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 SMIM4Q8WVI0 70 aa14.66□□□□□ -0.06
GMDS-208ENST00000530927 OR5H8P0DN80 308 aa14.65□□□□□ -0.06
GMDS-208ENST00000530927 DGCR2P98153 550 aa14.65□□□□□ -0.06
GMDS-208ENST00000530927 DEFA6Q01524 100 aa14.65□□□□□ -0.06
GMDS-208ENST00000530927 SSBP1Q04837 148 aaKnown RBP14.65□□□□□ -0.06
GMDS-208ENST00000530927 ECSCRQ19T08 205 aa14.65□□□□□ -0.06
GMDS-208ENST00000530927 RNASE12Q5GAN4 147 aaKnown RBP14.65□□□□□ -0.06
GMDS-208ENST00000530927 TEX38Q6PEX7 206 aa14.65□□□□□ -0.06
GMDS-208ENST00000530927 ETV3LQ6ZN32 361 aa14.65□□□□□ -0.06
GMDS-208ENST00000530927 MFSD4AQ8N468 514 aa14.65□□□□□ -0.06
GMDS-208ENST00000530927 GDPD1Q8N9F7 314 aa14.65□□□□□ -0.06
GMDS-208ENST00000530927 KLHL30-AS1Q8NEE0 82 aa14.65□□□□□ -0.06
GMDS-208ENST00000530927 SRRQ9GZT4 340 aa14.65□□□□□ -0.06
GMDS-208ENST00000530927 KLK15Q9H2R5 256 aa14.65□□□□□ -0.06
GMDS-208ENST00000530927 MTFP1Q9UDX5 166 aa14.65□□□□□ -0.06
GMDS-208ENST00000530927 ANAPC10Q9UM13 185 aa14.65□□□□□ -0.06
GMDS-208ENST00000530927 RBMX2Q9Y388 322 aaKnown RBP14.65□□□□□ -0.06
GMDS-208ENST00000530927 TNFSF12O43508 249 aa14.64□□□□□ -0.07
GMDS-208ENST00000530927 CRYZL1O95825 349 aa14.64□□□□□ -0.07
GMDS-208ENST00000530927 PMP2P02689 132 aa14.64□□□□□ -0.07
GMDS-208ENST00000530927 PPIFP30405 207 aaKnown RBP14.64□□□□□ -0.07
GMDS-208ENST00000530927 RFX2P48378 723 aa14.64□□□□□ -0.07
GMDS-208ENST00000530927 FXYD4P59646 89 aa14.64□□□□□ -0.07
GMDS-208ENST00000530927 SSBP2P81877 361 aaPredicted RBP14.64□□□□□ -0.07
GMDS-208ENST00000530927 EIF4EBP1Q13541 118 aaPredicted RBP14.64□□□□□ -0.07
GMDS-208ENST00000530927 DEFB136Q30KP8 78 aa14.64□□□□□ -0.07
GMDS-208ENST00000530927 OXLD1Q5BKU9 147 aa14.64□□□□□ -0.07
GMDS-208ENST00000530927 Q8N402 240 aa14.64□□□□□ -0.07
GMDS-208ENST00000530927 OR5AP2Q8NGF4 316 aa14.64□□□□□ -0.07
GMDS-208ENST00000530927 SECTM1Q8WVN6 248 aa14.64□□□□□ -0.07
GMDS-208ENST00000530927 HARBI1Q96MB7 349 aa14.64□□□□□ -0.07
GMDS-208ENST00000530927 TSNAXQ99598 290 aaKnown RBP14.64□□□□□ -0.07
GMDS-208ENST00000530927 CCL28Q9NRJ3 127 aa14.64□□□□□ -0.07
GMDS-208ENST00000530927 NECAP2Q9NVZ3 263 aa14.64□□□□□ -0.07
GMDS-208ENST00000530927 KLK11Q9UBX7 282 aa14.64□□□□□ -0.07
GMDS-208ENST00000530927 TRAV41A0A0B4J266 112 aa14.63□□□□□ -0.07
GMDS-208ENST00000530927 NUDT19A8MXV4 375 aa14.63□□□□□ -0.07
GMDS-208ENST00000530927 ARPC1BO15143 372 aaKnown RBP14.63□□□□□ -0.07
GMDS-208ENST00000530927 SOX15O60248 233 aa14.63□□□□□ -0.07
GMDS-208ENST00000530927 PPYP01298 95 aa14.63□□□□□ -0.07
GMDS-208ENST00000530927 IGHG4P01861 327 aa14.63□□□□□ -0.07
GMDS-208ENST00000530927 CRYGBP07316 175 aa14.63□□□□□ -0.07
GMDS-208ENST00000530927 NAT1P18440 290 aa14.63□□□□□ -0.07
GMDS-208ENST00000530927 RCVRNP35243 200 aa14.63□□□□□ -0.07
GMDS-208ENST00000530927 FOXE3Q13461 319 aa14.63□□□□□ -0.07
GMDS-208ENST00000530927 CDK10Q15131 360 aa14.63□□□□□ -0.07
GMDS-208ENST00000530927 Q6ZNX1 250 aa14.63□□□□□ -0.07
GMDS-208ENST00000530927 IDO2Q6ZQW0 420 aa14.63□□□□□ -0.07
GMDS-208ENST00000530927 ABHD5Q8WTS1 349 aa14.63□□□□□ -0.07
GMDS-208ENST00000530927 RNF5Q99942 180 aa14.63□□□□□ -0.07
GMDS-208ENST00000530927 THAP7Q9BT49 309 aaPredicted RBP14.63□□□□□ -0.07
GMDS-208ENST00000530927 TAS2R8Q9NYW2 309 aa14.63□□□□□ -0.07
GMDS-208ENST00000530927 A0A1B0GVG6 124 aa14.62□□□□□ -0.07
GMDS-208ENST00000530927 SHOXO15266 292 aa14.62□□□□□ -0.07
GMDS-208ENST00000530927 FCGR3BO75015 233 aa14.62□□□□□ -0.07
GMDS-208ENST00000530927 PF4P02776 101 aa14.62□□□□□ -0.07
GMDS-208ENST00000530927 PSMB8P28062 276 aa14.62□□□□□ -0.07
GMDS-208ENST00000530927 BRWD1-AS2P59051 145 aa14.62□□□□□ -0.07
GMDS-208ENST00000530927 GNB1P62873 340 aa14.62□□□□□ -0.07
GMDS-208ENST00000530927 MRGPRG-AS1Q2M3A8 158 aa14.62□□□□□ -0.07
GMDS-208ENST00000530927 TMEM177Q53S58 311 aa14.62□□□□□ -0.07
GMDS-208ENST00000530927 C19orf54Q5BKX5 351 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms