RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 EFNB3Q15768 340 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 ADIPOQQ15848 244 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 POU2AF1Q16633 256 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 VWC2Q2TAL6 325 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 LRRC75BQ2VPJ9 315 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 KHDC3LQ587J8 217 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 SP5Q6BEB4 398 aaPredicted RBP4.6□□□□□ -1.67
PCF11-205ENST00000530906 FAM71F2Q6NXP2 309 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 TMEM182Q6ZP80 229 aaPredicted RBP4.6□□□□□ -1.67
PCF11-205ENST00000530906 Q6ZRM9 215 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 ZNF429Q86V71 674 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 LRP11Q86VZ4 500 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 RPRMLQ8N4K4 120 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 LINC00482Q8N8I6 264 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 OR10P1Q8NGE3 313 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 DTD1Q8TEA8 209 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 MBD3L1Q8WWY6 194 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 BSCL2Q96G97 398 aaPredicted RBP4.6□□□□□ -1.67
PCF11-205ENST00000530906 ABHD14AQ9BUJ0 271 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 SCNM1Q9BWG6 230 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 EIF5A2Q9GZV4 153 aaKnown RBP4.6□□□□□ -1.67
PCF11-205ENST00000530906 PARP12Q9H0J9 701 aaKnown RBP4.6□□□□□ -1.67
PCF11-205ENST00000530906 MS4A5Q9H3V2 200 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 RBKSQ9H477 322 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 ESRP2Q9H6T0 727 aaKnown RBP4.6□□□□□ -1.67
PCF11-205ENST00000530906 KCNJ16Q9NPI9 418 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 SMCO4Q9NRQ5 59 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 COQ3Q9NZJ6 369 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 FZR1Q9UM11 496 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 PSG11Q9UQ72 335 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 TRGV8A0A0C4DH27 118 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 RBFOX3A6NFN3 312 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 C17orf98A8MV24 154 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 FNDC10F2Z333 226 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 C17orf112F2Z3M2 114 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 H7C2Y5 167 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 K7EM74 188 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 M0R1X1 148 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 ARID1AO14497 2285 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 TSPAN4O14817 238 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 S1PR2O95136 353 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 HRASP01112 189 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 KRASP01116 189 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 SFTPCP11686 197 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 PPT1P50897 306 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 EDDM3BP56851 147 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 RPL30P62888 115 aaKnown RBP4.59□□□□□ -1.67
PCF11-205ENST00000530906 FLI1Q01543 452 aaPredicted RBP4.59□□□□□ -1.67
PCF11-205ENST00000530906 SLC38A11Q08AI6 406 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 GUCA2BQ16661 112 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 TMEM249Q2WGJ8 235 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 TMEM41BQ5BJD5 291 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 SOHLH1Q5JUK2 328 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 ZNF506Q5JVG8 444 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 C5orf24Q7Z6I8 188 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 ODF3L1Q8IXM7 274 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 ZNF808Q8N4W9 903 aaPredicted RBP4.59□□□□□ -1.67
PCF11-205ENST00000530906 CISD2Q8N5K1 135 aaKnown RBP4.59□□□□□ -1.67
PCF11-205ENST00000530906 TMEM217Q8N7C4 229 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 C15orf54Q8N8G6 183 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 DDB2Q92466 427 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 TAF15Q92804 592 aaKnown RBP eCLIP4.59□□□□□ -1.67
PCF11-205ENST00000530906 R3HDM4Q96D70 268 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 SNRNP40Q96DI7 357 aaKnown RBP4.59□□□□□ -1.67
PCF11-205ENST00000530906 GAFA1Q96PS6 74 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 GPHA2Q96T91 129 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 S1PR3Q99500 378 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 P2RX4Q99571 388 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 SCRT1Q9BWW7 348 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 WDR61Q9GZS3 305 aaKnown RBP4.59□□□□□ -1.67
PCF11-205ENST00000530906 SH3BGRL3Q9H299 93 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 IFI27L2Q9H2X8 130 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 TANC2Q9HCD6 1990 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 IDI2-AS1Q9NZ38 188 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 KAAG1Q9UBP8 84 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 RPUSD1Q9UJJ7 312 aaKnown RBP4.59□□□□□ -1.67
PCF11-205ENST00000530906 PRELID1Q9Y255 219 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 ZNF257Q9Y2Q1 563 aa4.59□□□□□ -1.67
PCF11-205ENST00000530906 CEP250Q9BV73 2442 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 KIAA2026Q5HYC2 2103 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 SPEGQ15772 3267 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 A0A087WWC5 75 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 TRBV23-1A0A0A0MS06 115 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 IGHV3-64DA0A0J9YX35 117 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 LOC105371267A0A1B0GV96 52 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 DPRXA6NFQ7 191 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 LINC00473A8K010 186 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 CEBPZOSA8MTT3 80 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 B4DEV8 164 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 B9A039 149 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 RAMP3O60896 148 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 RBMXL2O75526 392 aaKnown RBP4.58□□□□□ -1.68
PCF11-205ENST00000530906 ARG1P05089 322 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 OR4A8P0C604 315 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 METTL15P1P0C7V9 234 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 IAPPP10997 89 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 FOLR2P14207 255 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 DAOP14920 347 aa4.58□□□□□ -1.68
PCF11-205ENST00000530906 ATF4P18848 351 aaPredicted RBP4.58□□□□□ -1.68
PCF11-205ENST00000530906 CHRNB4P30926 498 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms