RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 SPHARQ15513 63 aa11.28□□□□□ -0.6
CAPN1-219ENST00000530495 CD300EQ496F6 205 aaPredicted RBP11.28□□□□□ -0.6
CAPN1-219ENST00000530495 PLAC9Q5JTB6 97 aa11.28□□□□□ -0.6
CAPN1-219ENST00000530495 PHB2Q99623 299 aa11.28□□□□□ -0.6
CAPN1-219ENST00000530495 FAM110AQ9BQ89 295 aa11.28□□□□□ -0.6
CAPN1-219ENST00000530495 OR2D2Q9H210 308 aa11.28□□□□□ -0.6
CAPN1-219ENST00000530495 PLGRKTQ9HBL7 147 aa11.28□□□□□ -0.6
CAPN1-219ENST00000530495 TRBV9A0A0B4J1U6 114 aa11.27□□□□□ -0.61
CAPN1-219ENST00000530495 FAM223BA6NKX1 122 aa11.27□□□□□ -0.61
CAPN1-219ENST00000530495 BMPR1BO00238 502 aa11.27□□□□□ -0.61
CAPN1-219ENST00000530495 CDK1P06493 297 aa11.27□□□□□ -0.61
CAPN1-219ENST00000530495 CD3GP09693 182 aa11.27□□□□□ -0.61
CAPN1-219ENST00000530495 RHOGP84095 191 aa11.27□□□□□ -0.61
CAPN1-219ENST00000530495 PRSS8Q16651 343 aa11.27□□□□□ -0.61
CAPN1-219ENST00000530495 RTL8BQ17RB0 113 aa11.27□□□□□ -0.61
CAPN1-219ENST00000530495 FAM223AQ8IWN6 122 aa11.27□□□□□ -0.61
CAPN1-219ENST00000530495 OR56B1Q8NGI3 324 aa11.27□□□□□ -0.61
CAPN1-219ENST00000530495 OR10J5Q8NHC4 309 aa11.27□□□□□ -0.61
CAPN1-219ENST00000530495 AKIP1Q9NQ31 210 aa11.27□□□□□ -0.61
CAPN1-219ENST00000530495 SLC2A8Q9NY64 477 aa11.27□□□□□ -0.61
CAPN1-219ENST00000530495 ZNF230Q9UIE0 474 aaPredicted RBP11.27□□□□□ -0.61
CAPN1-219ENST00000530495 LSM2Q9Y333 95 aaKnown RBP11.27□□□□□ -0.61
CAPN1-219ENST00000530495 TRBV6-7A0A0A0MS04 114 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.26□□□□□ -0.61
CAPN1-219ENST00000530495 FABP7O15540 132 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 DIRAS3O95661 229 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 CD7P09564 240 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 KIR2DS2P43631 304 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 UBE2KP61086 200 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 ATP5G2Q06055 141 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 DEFB114Q30KQ6 69 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 C2orf76Q3KRA6 126 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 VMA21Q3ZAQ7 101 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 IGSF11Q5DX21 431 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 TMEM91Q6ZNR0 172 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 DEFB125Q8N687 156 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 SRSF12Q8WXF0 261 aaKnown RBP11.26□□□□□ -0.61
CAPN1-219ENST00000530495 DDB2Q92466 427 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 KCTD12Q96CX2 325 aaKnown RBP11.26□□□□□ -0.61
CAPN1-219ENST00000530495 C5orf30Q96GV9 206 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 CABLES2Q9BTV7 478 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 KCNK7Q9Y2U2 307 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 AK6Q9Y3D8 172 aaKnown RBP11.26□□□□□ -0.61
CAPN1-219ENST00000530495 HYDINQ4G0P3 5121 aa11.26□□□□□ -0.61
CAPN1-219ENST00000530495 OR11H12B2RN74 326 aa11.25□□□□□ -0.61
CAPN1-219ENST00000530495 BET1O15155 118 aa11.25□□□□□ -0.61
CAPN1-219ENST00000530495 PRH1P02810 166 aa11.25□□□□□ -0.61
CAPN1-219ENST00000530495 GSTT2P0CG29 244 aa11.25□□□□□ -0.61
CAPN1-219ENST00000530495 GSTT2BP0CG30 244 aa11.25□□□□□ -0.61
CAPN1-219ENST00000530495 ZNF45Q02386 682 aa11.25□□□□□ -0.61
CAPN1-219ENST00000530495 TPBGQ13641 420 aa11.25□□□□□ -0.61
CAPN1-219ENST00000530495 RAB11BQ15907 218 aa11.25□□□□□ -0.61
CAPN1-219ENST00000530495 TNXAQ16473 311 aa11.25□□□□□ -0.61
CAPN1-219ENST00000530495 TMEM203Q969S6 136 aa11.25□□□□□ -0.61
CAPN1-219ENST00000530495 FAM3DQ96BQ1 224 aa11.25□□□□□ -0.61
CAPN1-219ENST00000530495 ADTRPQ96IZ2 230 aa11.25□□□□□ -0.61
CAPN1-219ENST00000530495 ZC4H2Q9NQZ6 224 aa11.25□□□□□ -0.61
CAPN1-219ENST00000530495 DMRT1Q9Y5R6 373 aa11.25□□□□□ -0.61
CAPN1-219ENST00000530495 PTGES3LE9PB15 166 aa11.24□□□□□ -0.61
CAPN1-219ENST00000530495 MPPED1O15442 326 aa11.24□□□□□ -0.61
CAPN1-219ENST00000530495 DENRO43583 198 aaKnown RBP11.24□□□□□ -0.61
CAPN1-219ENST00000530495 FCGR3AP08637 254 aa11.24□□□□□ -0.61
CAPN1-219ENST00000530495 DUTP33316 252 aaKnown RBP11.24□□□□□ -0.61
CAPN1-219ENST00000530495 CLDN12P56749 244 aa11.24□□□□□ -0.61
CAPN1-219ENST00000530495 MRPS15P82914 257 aaKnown RBP11.24□□□□□ -0.61
CAPN1-219ENST00000530495 EXOSC2Q13868 293 aaKnown RBP11.24□□□□□ -0.61
CAPN1-219ENST00000530495 MED22Q15528 200 aa11.24□□□□□ -0.61
CAPN1-219ENST00000530495 FAM209BQ5JX69 171 aa11.24□□□□□ -0.61
CAPN1-219ENST00000530495 LIPKQ5VXJ0 399 aa11.24□□□□□ -0.61
CAPN1-219ENST00000530495 IDO2Q6ZQW0 420 aa11.24□□□□□ -0.61
CAPN1-219ENST00000530495 TTC9CQ8N5M4 171 aa11.24□□□□□ -0.61
CAPN1-219ENST00000530495 NECAP1Q8NC96 275 aa11.24□□□□□ -0.61
CAPN1-219ENST00000530495 OSR1Q8TAX0 266 aaPredicted RBP11.24□□□□□ -0.61
CAPN1-219ENST00000530495 SRD5A3Q9H8P0 318 aa11.24□□□□□ -0.61
CAPN1-219ENST00000530495 TECRQ9NZ01 308 aaKnown RBP11.24□□□□□ -0.61
CAPN1-219ENST00000530495 C2orf70A6NJV1 201 aa11.23□□□□□ -0.61
CAPN1-219ENST00000530495 TUSC2O75896 110 aa11.23□□□□□ -0.61
CAPN1-219ENST00000530495 ARL6IP5O75915 188 aa11.23□□□□□ -0.61
CAPN1-219ENST00000530495 CRYZL1O95825 349 aa11.23□□□□□ -0.61
CAPN1-219ENST00000530495 FOLR2P14207 255 aa11.23□□□□□ -0.61
CAPN1-219ENST00000530495 RANBP1P43487 201 aa11.23□□□□□ -0.61
CAPN1-219ENST00000530495 DYNLRB2Q8TF09 96 aa11.23□□□□□ -0.61
CAPN1-219ENST00000530495 ACOT12Q8WYK0 555 aa11.23□□□□□ -0.61
CAPN1-219ENST00000530495 UFD1Q92890 307 aa11.23□□□□□ -0.61
CAPN1-219ENST00000530495 RAB3CQ96E17 227 aa11.23□□□□□ -0.61
CAPN1-219ENST00000530495 SPIN2AQ99865 258 aa11.23□□□□□ -0.61
CAPN1-219ENST00000530495 SPIN2BQ9BPZ2 258 aa11.23□□□□□ -0.61
CAPN1-219ENST00000530495 WFDC10AQ9H1F0 79 aa11.23□□□□□ -0.61
CAPN1-219ENST00000530495 ZNF430Q9H8G1 570 aaPredicted RBP11.23□□□□□ -0.61
CAPN1-219ENST00000530495 RAB22AQ9UL26 194 aa11.23□□□□□ -0.61
CAPN1-219ENST00000530495 RBM7Q9Y580 266 aaKnown RBP11.23□□□□□ -0.61
CAPN1-219ENST00000530495 LINC00473A8K010 186 aa11.22□□□□□ -0.61
CAPN1-219ENST00000530495 LGALS9O00182 355 aa11.22□□□□□ -0.61
CAPN1-219ENST00000530495 ACTL6BO94805 426 aa11.22□□□□□ -0.61
CAPN1-219ENST00000530495 PLA2G7Q13093 441 aa11.22□□□□□ -0.61
CAPN1-219ENST00000530495 IRF3Q14653 427 aa11.22□□□□□ -0.61
CAPN1-219ENST00000530495 CDK10Q15131 360 aa11.22□□□□□ -0.61
CAPN1-219ENST00000530495 TRAM1Q15629 374 aa11.22□□□□□ -0.61
CAPN1-219ENST00000530495 GUCA2BQ16661 112 aa11.22□□□□□ -0.61
CAPN1-219ENST00000530495 C15orf32Q32M92 178 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms