RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 WDR31Q8NA23 367 aa16.22■□□□□ 0.19
PCF11-203ENST00000530304 DCTN5Q9BTE1 182 aa16.22■□□□□ 0.19
PCF11-203ENST00000530304 IFNL4K9M1U5 179 aa16.22■□□□□ 0.19
PCF11-203ENST00000530304 WISP2O76076 250 aa16.22■□□□□ 0.19
PCF11-203ENST00000530304 HOXC12P31275 282 aa16.22■□□□□ 0.19
PCF11-203ENST00000530304 FOXF2Q12947 444 aa16.22■□□□□ 0.19
PCF11-203ENST00000530304 CLEC12BQ2HXU8 276 aa16.22■□□□□ 0.19
PCF11-203ENST00000530304 TGIF2LYQ8IUE0 185 aa16.22■□□□□ 0.19
PCF11-203ENST00000530304 TMEM183AQ8IXX5 376 aa16.22■□□□□ 0.19
PCF11-203ENST00000530304 LOC400499M0QZD8 3231 aa16.22■□□□□ 0.19
PCF11-203ENST00000530304 C15orf62A8K5M9 175 aa16.21■□□□□ 0.19
PCF11-203ENST00000530304 PPP5D1E7EU14 171 aa16.21■□□□□ 0.19
PCF11-203ENST00000530304 GYPAP02724 150 aa16.21■□□□□ 0.19
PCF11-203ENST00000530304 SOX8P57073 446 aa16.21■□□□□ 0.19
PCF11-203ENST00000530304 LTC4SQ16873 150 aa16.21■□□□□ 0.19
PCF11-203ENST00000530304 PLA2G2CQ5R387 149 aa16.21■□□□□ 0.19
PCF11-203ENST00000530304 Q8N7P7 452 aa16.21■□□□□ 0.19
PCF11-203ENST00000530304 NEIL1Q96FI4 390 aaPredicted RBP16.21■□□□□ 0.19
PCF11-203ENST00000530304 NCOR1O75376 2440 aa16.21■□□□□ 0.19
PCF11-203ENST00000530304 NDUFS6O75380 124 aaKnown RBP16.21■□□□□ 0.19
PCF11-203ENST00000530304 OR9G9P0C7N8 305 aa16.21■□□□□ 0.19
PCF11-203ENST00000530304 CDC34P49427 236 aaPredicted RBP16.21■□□□□ 0.19
PCF11-203ENST00000530304 GUSBP1Q15486 140 aa16.21■□□□□ 0.19
PCF11-203ENST00000530304 SMIM21Q3B7S5 101 aa16.21■□□□□ 0.19
PCF11-203ENST00000530304 DNLZQ5SXM8 178 aa16.21■□□□□ 0.19
PCF11-203ENST00000530304 VWA1Q6PCB0 445 aa16.21■□□□□ 0.19
PCF11-203ENST00000530304 R3HDM4Q96D70 268 aa16.21■□□□□ 0.19
PCF11-203ENST00000530304 ANAPC16Q96DE5 110 aa16.21■□□□□ 0.19
PCF11-203ENST00000530304 PCGF1Q9BSM1 259 aa16.21■□□□□ 0.19
PCF11-203ENST00000530304 WASF3Q9UPY6 502 aa16.21■□□□□ 0.19
PCF11-203ENST00000530304 SPENQ96T58 3664 aaKnown RBP16.21■□□□□ 0.18
PCF11-203ENST00000530304 SMCO3A2RU48 225 aa16.2■□□□□ 0.18
PCF11-203ENST00000530304 C15orf65H3BRN8 121 aa16.2■□□□□ 0.18
PCF11-203ENST00000530304 HRASP01112 189 aa16.2■□□□□ 0.18
PCF11-203ENST00000530304 DEFA6Q01524 100 aa16.2■□□□□ 0.18
PCF11-203ENST00000530304 ACOT6Q3I5F7 207 aaPredicted RBP16.2■□□□□ 0.18
PCF11-203ENST00000530304 CD177Q8N6Q3 437 aa16.2■□□□□ 0.18
PCF11-203ENST00000530304 C11orf94C9JXX5 98 aa16.2■□□□□ 0.18
PCF11-203ENST00000530304 SPINT2O43291 252 aa16.2■□□□□ 0.18
PCF11-203ENST00000530304 KITLGP21583 273 aa16.2■□□□□ 0.18
PCF11-203ENST00000530304 NPPCP23582 126 aa16.2■□□□□ 0.18
PCF11-203ENST00000530304 KIR2DL2P43627 348 aaPredicted RBP16.2■□□□□ 0.18
PCF11-203ENST00000530304 ZNF600Q6ZNG1 722 aa16.2■□□□□ 0.18
PCF11-203ENST00000530304 S100PBPQ96BU1 408 aa16.2■□□□□ 0.18
PCF11-203ENST00000530304 PRR14LQ5THK1 2151 aa16.2■□□□□ 0.18
PCF11-203ENST00000530304 A0A1W2PPQ1 181 aa16.19■□□□□ 0.18
PCF11-203ENST00000530304 PROP1O75360 226 aa16.19■□□□□ 0.18
PCF11-203ENST00000530304 LY86O95711 162 aa16.19■□□□□ 0.18
PCF11-203ENST00000530304 CECR9P0C854 216 aa16.19■□□□□ 0.18
PCF11-203ENST00000530304 CD1BP29016 333 aa16.19■□□□□ 0.18
PCF11-203ENST00000530304 HTD2P86397 168 aa16.19■□□□□ 0.18
PCF11-203ENST00000530304 EDDM3AQ14507 147 aa16.19■□□□□ 0.18
PCF11-203ENST00000530304 PLPPR2Q96GM1 343 aa16.19■□□□□ 0.18
PCF11-203ENST00000530304 OR6C3Q9NZP0 311 aa16.19■□□□□ 0.18
PCF11-203ENST00000530304 PTPRBP23467 1997 aa16.19■□□□□ 0.18
PCF11-203ENST00000530304 IGHG3P01860 377 aa16.19■□□□□ 0.18
PCF11-203ENST00000530304 ADH4P08319 380 aa16.19■□□□□ 0.18
PCF11-203ENST00000530304 GPX4P36969 197 aaPredicted RBP16.19■□□□□ 0.18
PCF11-203ENST00000530304 GCSAMLQ5JQS6 135 aa16.19■□□□□ 0.18
PCF11-203ENST00000530304 DIRC2Q96SL1 478 aa16.19■□□□□ 0.18
PCF11-203ENST00000530304 DUTP33316 252 aaKnown RBP16.18■□□□□ 0.18
PCF11-203ENST00000530304 OR1P1Q8NH06 330 aa16.18■□□□□ 0.18
PCF11-203ENST00000530304 WDR83OSQ9Y284 106 aa16.18■□□□□ 0.18
PCF11-203ENST00000530304 TRAV38-1A0A0B4J264 116 aa16.18■□□□□ 0.18
PCF11-203ENST00000530304 FCGR3BO75015 233 aa16.18■□□□□ 0.18
PCF11-203ENST00000530304 VENTXO95231 258 aa16.18■□□□□ 0.18
PCF11-203ENST00000530304 PRDX2P32119 198 aa16.18■□□□□ 0.18
PCF11-203ENST00000530304 GPR12P47775 334 aa16.18■□□□□ 0.18
PCF11-203ENST00000530304 FAM3BP58499 235 aaPredicted RBP16.18■□□□□ 0.18
PCF11-203ENST00000530304 ZNF718Q3SXZ3 478 aa16.18■□□□□ 0.18
PCF11-203ENST00000530304 OR5T1Q8NG75 326 aa16.18■□□□□ 0.18
PCF11-203ENST00000530304 LRRC29Q8WV35 223 aa16.18■□□□□ 0.18
PCF11-203ENST00000530304 GCH1P30793 250 aa16.17■□□□□ 0.18
PCF11-203ENST00000530304 P2RY6Q15077 328 aa16.17■□□□□ 0.18
PCF11-203ENST00000530304 SSX9Q7RTT3 188 aa16.17■□□□□ 0.18
PCF11-203ENST00000530304 DEFB123Q8N688 67 aa16.17■□□□□ 0.18
PCF11-203ENST00000530304 C9orf106Q8NAJ2 232 aa16.17■□□□□ 0.18
PCF11-203ENST00000530304 RHOVQ96L33 236 aa16.17■□□□□ 0.18
PCF11-203ENST00000530304 XKRY2A2RUG3 117 aa16.17■□□□□ 0.18
PCF11-203ENST00000530304 OR2T10Q8NGZ9 312 aa16.17■□□□□ 0.18
PCF11-203ENST00000530304 HPRT1P00492 218 aa16.16■□□□□ 0.18
PCF11-203ENST00000530304 CRYAAP02489 173 aa16.16■□□□□ 0.18
PCF11-203ENST00000530304 AMBPP02760 352 aa16.16■□□□□ 0.18
PCF11-203ENST00000530304 EDDM3BP56851 147 aa16.16■□□□□ 0.18
PCF11-203ENST00000530304 TRAT1Q6PIZ9 186 aa16.16■□□□□ 0.18
PCF11-203ENST00000530304 EGR1P18146 543 aa16.16■□□□□ 0.18
PCF11-203ENST00000530304 BMP5P22003 454 aa16.16■□□□□ 0.18
PCF11-203ENST00000530304 SRP14P37108 136 aaKnown RBP16.16■□□□□ 0.18
PCF11-203ENST00000530304 UBE2G2P60604 165 aa16.16■□□□□ 0.18
PCF11-203ENST00000530304 PKIAP61925 76 aa16.16■□□□□ 0.18
PCF11-203ENST00000530304 MORN2Q502X0 79 aa16.16■□□□□ 0.18
PCF11-203ENST00000530304 C1orf162Q8NEQ5 155 aaPredicted RBP16.16■□□□□ 0.18
PCF11-203ENST00000530304 NBEAQ8NFP9 2946 aa16.16■□□□□ 0.18
PCF11-203ENST00000530304 GGCTO75223 188 aaKnown RBP16.15■□□□□ 0.18
PCF11-203ENST00000530304 IFNA10P01566 189 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 CCL11P51671 97 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 GNB1P62873 340 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 PAX5Q02548 391 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 AARDQ4LEZ3 155 aa16.15■□□□□ 0.18
PCF11-203ENST00000530304 COA6Q5JTJ3 125 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms