RNA–Protein interactions for RNA: ENST00000529993.5

LRP5-206, Transcript of LDL receptor related protein 5, humanhuman

TSL 1 (best)

Gene LRP5, Length 5,103 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-206ENST00000529993 DCTN5Q9BTE1 182 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 PRR19A6NJB7 356 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 C12orf77C9JDV5 145 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 IGHV3-48P01763 117 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 FAM222BQ8WU58 562 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 RASL11BQ9BPW5 248 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 DOCK7Q96N67 2140 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 PINLYPA6NC86 204 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 ZNF343Q6P1L6 599 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 RTN4RL2Q86UN3 420 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 C17orf82Q86X59 251 aaPredicted RBP12.73□□□□□ -0.37
LRP5-206ENST00000529993 COA4Q9NYJ1 87 aa12.73□□□□□ -0.37
LRP5-206ENST00000529993 INTS1Q8N201 2190 aaKnown RBP12.72□□□□□ -0.37
LRP5-206ENST00000529993 COL8A1P27658 744 aa12.72□□□□□ -0.37
LRP5-206ENST00000529993 HIST1H2BAQ96A08 127 aa12.72□□□□□ -0.37
LRP5-206ENST00000529993 TMUB1Q9BVT8 246 aa12.72□□□□□ -0.37
LRP5-206ENST00000529993 NLRC5Q86WI3 1866 aa12.72□□□□□ -0.37
LRP5-206ENST00000529993 FOXG1P55316 489 aaPredicted RBP12.72□□□□□ -0.37
LRP5-206ENST00000529993 PLAURQ03405 335 aa12.72□□□□□ -0.37
LRP5-206ENST00000529993 OR2D3Q8NGH3 330 aa12.72□□□□□ -0.37
LRP5-206ENST00000529993 SMPD2O60906 423 aa12.72□□□□□ -0.37
LRP5-206ENST00000529993 PTGDSP41222 190 aa12.72□□□□□ -0.37
LRP5-206ENST00000529993 TMEM183BQ1AE95 376 aa12.72□□□□□ -0.37
LRP5-206ENST00000529993 RNF151Q2KHN1 245 aa12.72□□□□□ -0.37
LRP5-206ENST00000529993 ZDHHC16Q969W1 377 aa12.72□□□□□ -0.37
LRP5-206ENST00000529993 IGLV3-32A0A0A0MS00 114 aa12.72□□□□□ -0.37
LRP5-206ENST00000529993 CECR9P0C854 216 aa12.72□□□□□ -0.37
LRP5-206ENST00000529993 PSG7Q13046 419 aa12.72□□□□□ -0.37
LRP5-206ENST00000529993 RPL39P5Q59GN2 51 aa12.72□□□□□ -0.37
LRP5-206ENST00000529993 WBP1Q96G27 269 aa12.72□□□□□ -0.37
LRP5-206ENST00000529993 FAM117AQ9C073 453 aa12.72□□□□□ -0.37
LRP5-206ENST00000529993 IGKV1D-13A0A0B4J2D9 117 aa12.71□□□□□ -0.37
LRP5-206ENST00000529993 C9orf172C9J069 976 aa12.71□□□□□ -0.37
LRP5-206ENST00000529993 NEURL1O76050 574 aa12.71□□□□□ -0.37
LRP5-206ENST00000529993 IGKV1-13P0DP09 117 aa12.71□□□□□ -0.37
LRP5-206ENST00000529993 LSM10Q969L4 123 aaKnown RBP12.71□□□□□ -0.37
LRP5-206ENST00000529993 COL6A6A6NMZ7 2263 aa12.71□□□□□ -0.37
LRP5-206ENST00000529993 UCP1P25874 307 aa12.71□□□□□ -0.37
LRP5-206ENST00000529993 SRSF3P84103 164 aaKnown RBP12.71□□□□□ -0.37
LRP5-206ENST00000529993 BIVMQ86UB2 503 aa12.71□□□□□ -0.37
LRP5-206ENST00000529993 GCSAMQ8N6F7 178 aa12.71□□□□□ -0.37
LRP5-206ENST00000529993 ZIC4Q8N9L1 334 aa12.71□□□□□ -0.37
LRP5-206ENST00000529993 IL19Q9UHD0 177 aa12.71□□□□□ -0.37
LRP5-206ENST00000529993 HILPDAQ9Y5L2 63 aa12.71□□□□□ -0.37
LRP5-206ENST00000529993 CEACAM18A8MTB9 384 aa12.71□□□□□ -0.38
LRP5-206ENST00000529993 P01737 135 aa12.71□□□□□ -0.38
LRP5-206ENST00000529993 LINC00869P0C866 280 aa12.71□□□□□ -0.38
LRP5-206ENST00000529993 HOXB1P14653 301 aaPredicted RBP12.71□□□□□ -0.38
LRP5-206ENST00000529993 TCF19Q9Y242 345 aa12.71□□□□□ -0.38
LRP5-206ENST00000529993 ZNF716A6NP11 495 aa12.71□□□□□ -0.38
LRP5-206ENST00000529993 FAM90A26D6RGX4 464 aa12.71□□□□□ -0.38
LRP5-206ENST00000529993 ZNF137PP52743 207 aa12.71□□□□□ -0.38
LRP5-206ENST00000529993 C1orf174Q8IYL3 243 aa12.71□□□□□ -0.38
LRP5-206ENST00000529993 HEXA-AS1Q9H8Q6 139 aa12.71□□□□□ -0.38
LRP5-206ENST00000529993 FBLN5Q9UBX5 448 aa12.71□□□□□ -0.38
LRP5-206ENST00000529993 LHX2P50458 406 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 HIST3H3Q16695 136 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 PERPQ96FX8 193 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 SMIM8Q96KF7 97 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 PAXXQ9BUH6 204 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 CCL1P22362 96 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 CLDN18P56856 261 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 FHL1Q13642 323 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 ASCL5Q7RTU5 278 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 OR8I2Q8N0Y5 310 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 UBTD1Q9HAC8 227 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 NAGKQ9UJ70 344 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 GBF1Q92538 1859 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 DOCK9Q9BZ29 2069 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 IGKV3-7A0A075B6H7 116 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 TMSB15BA0A087X1C1 80 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 M0R2Z0 102 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 SLC25A17O43808 307 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 CTSSP25774 331 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 ABLIM2Q6H8Q1 611 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 TCTEX1D1Q8N7M0 179 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 TMEM105Q8N8V8 129 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 QTRT1Q9BXR0 403 aaKnown RBP12.7□□□□□ -0.38
LRP5-206ENST00000529993 GPR61Q9BZJ8 451 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 FER1L5A0AVI2 2057 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 TFF1P04155 84 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 RPL8P62917 257 aaKnown RBP12.7□□□□□ -0.38
LRP5-206ENST00000529993 FAM89BQ8N5H3 189 aa12.7□□□□□ -0.38
LRP5-206ENST00000529993 RCC1LQ96I51 464 aaKnown RBP12.7□□□□□ -0.38
LRP5-206ENST00000529993 HSPE1P61604 102 aaKnown RBP12.69□□□□□ -0.38
LRP5-206ENST00000529993 ZFP36L1Q07352 338 aaKnown RBP12.69□□□□□ -0.38
LRP5-206ENST00000529993 OR5AU1Q8NGC0 362 aa12.69□□□□□ -0.38
LRP5-206ENST00000529993 KIAA2026Q5HYC2 2103 aa12.69□□□□□ -0.38
LRP5-206ENST00000529993 SCN8AQ9UQD0 1980 aa12.69□□□□□ -0.38
LRP5-206ENST00000529993 NOTCH4Q99466 2003 aa12.69□□□□□ -0.38
LRP5-206ENST00000529993 IGKV1-12A0A0C4DH73 117 aa12.69□□□□□ -0.38
LRP5-206ENST00000529993 C17orf98A8MV24 154 aa12.69□□□□□ -0.38
LRP5-206ENST00000529993 MPDU1O75352 247 aa12.69□□□□□ -0.38
LRP5-206ENST00000529993 IGKV1D-12P01611 117 aa12.69□□□□□ -0.38
LRP5-206ENST00000529993 ARL14EPLP0DKL9 152 aa12.69□□□□□ -0.38
LRP5-206ENST00000529993 CCKARP32238 428 aa12.69□□□□□ -0.38
LRP5-206ENST00000529993 RPL27AP46776 148 aaKnown RBP12.69□□□□□ -0.38
LRP5-206ENST00000529993 KRTCAP3Q53RY4 240 aa12.69□□□□□ -0.38
LRP5-206ENST00000529993 VOPP1Q96AW1 172 aa12.69□□□□□ -0.38
LRP5-206ENST00000529993 WASHC3Q9Y3C0 194 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms