RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 RAG2P55895 527 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 BRWD1-AS2P59051 145 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 RPS16P62249 146 aaKnown RBP11.14□□□□□ -0.63
USF1-209ENST00000529476 TAGLNQ01995 201 aaKnown RBP11.14□□□□□ -0.63
USF1-209ENST00000529476 ABCA11PQ4W5N1 156 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 C11orf88Q6PI97 169 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 IDO2Q6ZQW0 420 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 CMTM1Q8IZ96 169 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 C5orf56Q8N8D9 126 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 Q8N9W7 124 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 OR8H1Q8NGG4 311 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 OR4C13Q8NGP0 309 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 OR51H1Q8NH63 302 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 FLYWCH2Q96CP2 140 aaKnown RBP11.14□□□□□ -0.63
USF1-209ENST00000529476 CCDC32Q9BV29 185 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 WDR12Q9GZL7 423 aaKnown RBP11.14□□□□□ -0.63
USF1-209ENST00000529476 SLC2A8Q9NY64 477 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 SCP2D1Q9UJQ7 156 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 PRELID3BQ9Y3B1 194 aa11.14□□□□□ -0.63
USF1-209ENST00000529476 M0QZK8 103 aa11.13□□□□□ -0.63
USF1-209ENST00000529476 NBR2O15453 112 aa11.13□□□□□ -0.63
USF1-209ENST00000529476 FGF16O43320 207 aa11.13□□□□□ -0.63
USF1-209ENST00000529476 TSPAN9O75954 239 aa11.13□□□□□ -0.63
USF1-209ENST00000529476 CRYZL1O95825 349 aa11.13□□□□□ -0.63
USF1-209ENST00000529476 CD40LGP29965 261 aa11.13□□□□□ -0.63
USF1-209ENST00000529476 CATR1Q13166 79 aa11.13□□□□□ -0.63
USF1-209ENST00000529476 CBX3Q13185 183 aa11.13□□□□□ -0.63
USF1-209ENST00000529476 TMEM177Q53S58 311 aa11.13□□□□□ -0.63
USF1-209ENST00000529476 DEDD2Q8WXF8 326 aa11.13□□□□□ -0.63
USF1-209ENST00000529476 RNF5Q99942 180 aa11.13□□□□□ -0.63
USF1-209ENST00000529476 RANBP3Q9H6Z4 567 aaPredicted RBP11.13□□□□□ -0.63
USF1-209ENST00000529476 ZNF702PQ9H963 129 aa11.13□□□□□ -0.63
USF1-209ENST00000529476 SLC2A9Q9NRM0 540 aa11.13□□□□□ -0.63
USF1-209ENST00000529476 SIGLEC9Q9Y336 463 aa11.13□□□□□ -0.63
USF1-209ENST00000529476 MEGF8Q7Z7M0 2845 aa11.13□□□□□ -0.63
USF1-209ENST00000529476 TMEM89A2RUT3 159 aa11.12□□□□□ -0.63
USF1-209ENST00000529476 RAMP3O60896 148 aa11.12□□□□□ -0.63
USF1-209ENST00000529476 NDUFA3O95167 84 aa11.12□□□□□ -0.63
USF1-209ENST00000529476 MDKP21741 143 aaPredicted RBP11.12□□□□□ -0.63
USF1-209ENST00000529476 ECI1P42126 302 aa11.12□□□□□ -0.63
USF1-209ENST00000529476 C9orf152Q5JTZ5 239 aa11.12□□□□□ -0.63
USF1-209ENST00000529476 TBC1D26Q86UD7 250 aa11.12□□□□□ -0.63
USF1-209ENST00000529476 SPAG16Q8N0X2 631 aa11.12□□□□□ -0.63
USF1-209ENST00000529476 FAM71E2Q8N5Q1 922 aa11.12□□□□□ -0.63
USF1-209ENST00000529476 NPBQ8NG41 125 aa11.12□□□□□ -0.63
USF1-209ENST00000529476 OR4F5Q8NH21 305 aa11.12□□□□□ -0.63
USF1-209ENST00000529476 ZFAND1Q8TCF1 268 aa11.12□□□□□ -0.63
USF1-209ENST00000529476 ZNF486Q96H40 463 aaPredicted RBP11.12□□□□□ -0.63
USF1-209ENST00000529476 HARBI1Q96MB7 349 aa11.12□□□□□ -0.63
USF1-209ENST00000529476 PRSS22Q9GZN4 317 aa11.12□□□□□ -0.63
USF1-209ENST00000529476 SRRM4A7MD48 611 aaKnown RBP11.11□□□□□ -0.63
USF1-209ENST00000529476 RRHO14718 337 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 SHOXO15266 292 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 IGLV2-23P01705 113 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 CTSDP07339 412 aaPredicted RBP11.11□□□□□ -0.63
USF1-209ENST00000529476 S100GP29377 79 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 KIR2DS2P43631 304 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 PIGPP57054 158 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 RND3P61587 244 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 PSG5Q15238 335 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 SURF2Q15527 256 aaPredicted RBP11.11□□□□□ -0.63
USF1-209ENST00000529476 C5orf64Q2M2E5 130 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 Q8N2B8 174 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 OR4S2Q8NH73 311 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 LINC01006Q8NI28 216 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 TSNAXQ99598 290 aaKnown RBP11.11□□□□□ -0.63
USF1-209ENST00000529476 RASL11BQ9BPW5 248 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 RTBDNQ9BSG5 229 aaPredicted RBP11.11□□□□□ -0.63
USF1-209ENST00000529476 FBXL15Q9H469 300 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 C5orf66Q9H5L9 145 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 C16orf95Q9H693 158 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 LIN7CQ9NUP9 197 aaKnown RBP11.11□□□□□ -0.63
USF1-209ENST00000529476 KIAA1456Q9P272 454 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 GPR132Q9UNW8 380 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 VSIG4Q9Y279 399 aa11.11□□□□□ -0.63
USF1-209ENST00000529476 NAP1L6A6NFF2 107 aa11.1□□□□□ -0.63
USF1-209ENST00000529476 MPPED1O15442 326 aa11.1□□□□□ -0.63
USF1-209ENST00000529476 PLA2G10O15496 165 aa11.1□□□□□ -0.63
USF1-209ENST00000529476 RBFOX2O43251 390 aaKnown RBP eCLIP11.1□□□□□ -0.63
USF1-209ENST00000529476 SLC25A17O43808 307 aa11.1□□□□□ -0.63
USF1-209ENST00000529476 VSIG10L2P0DP72 767 aa11.1□□□□□ -0.63
USF1-209ENST00000529476 F2RP25116 425 aa11.1□□□□□ -0.63
USF1-209ENST00000529476 LGALS7P47929 136 aa11.1□□□□□ -0.63
USF1-209ENST00000529476 CCR6P51684 374 aa11.1□□□□□ -0.63
USF1-209ENST00000529476 FOXL1Q12952 345 aa11.1□□□□□ -0.63
USF1-209ENST00000529476 TMEM95Q3KNT9 176 aa11.1□□□□□ -0.63
USF1-209ENST00000529476 POC5Q8NA72 575 aa11.1□□□□□ -0.63
USF1-209ENST00000529476 OR2T6Q8NHC8 308 aa11.1□□□□□ -0.63
USF1-209ENST00000529476 OSR1Q8TAX0 266 aaPredicted RBP11.1□□□□□ -0.63
USF1-209ENST00000529476 TPSG1Q9NRR2 321 aa11.1□□□□□ -0.63
USF1-209ENST00000529476 COPZ2Q9P299 210 aa11.1□□□□□ -0.63
USF1-209ENST00000529476 METTL1Q9UBP6 276 aaKnown RBP11.1□□□□□ -0.63
USF1-209ENST00000529476 C14orf166Q9Y224 244 aaKnown RBP11.1□□□□□ -0.63
USF1-209ENST00000529476 FCN1O00602 326 aa11.09□□□□□ -0.63
USF1-209ENST00000529476 UPK1BO75841 260 aa11.09□□□□□ -0.63
USF1-209ENST00000529476 SPDEFO95238 335 aa11.09□□□□□ -0.63
USF1-209ENST00000529476 CRYGBP07316 175 aa11.09□□□□□ -0.63
USF1-209ENST00000529476 BTCP35070 178 aa11.09□□□□□ -0.63
USF1-209ENST00000529476 PLGLAQ15195 96 aa11.09□□□□□ -0.63
USF1-209ENST00000529476 AWAT1Q58HT5 328 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms