RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 YPEL2Q96QA6 119 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 PRELID3BQ9Y3B1 194 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 IGKV1D-17A0A075B6S4 117 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 TRGV10A0A0A0MS01 117 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 A0A1B0GW64 132 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 FAM90A9PA6NNJ1 464 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 CST7O76096 145 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 IGKV1-39P01597 117 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 IGKV1-5P01602 117 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 IGKV1D-39P04432 117 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 CD5P06127 495 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 OR8U8P0C7N1 319 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 MUC1P15941 1255 aaPredicted RBP9.75□□□□□ -0.85
USF1-208ENST00000528768 EGR1P18146 543 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 ATP6V0CP27449 155 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 SNCAP37840 140 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 EDDM3BP56851 147 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 RPP30P78346 268 aaKnown RBP9.75□□□□□ -0.85
USF1-208ENST00000528768 WFDC8Q8IUA0 241 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 C1orf87Q8N0U7 546 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 LILRB2Q8N423 598 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 TMEM217Q8N7C4 229 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 SDSLQ96GA7 329 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 CCL19Q99731 98 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 PARD6GQ9BYG4 376 aaPredicted RBP9.75□□□□□ -0.85
USF1-208ENST00000528768 MRPL37Q9BZE1 423 aaKnown RBP9.75□□□□□ -0.85
USF1-208ENST00000528768 EIF5A2Q9GZV4 153 aaKnown RBP9.75□□□□□ -0.85
USF1-208ENST00000528768 ZNF665Q9H7R5 613 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 UNKLQ9H9P5 680 aaKnown RBP9.75□□□□□ -0.85
USF1-208ENST00000528768 JKAMPQ9P055 326 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 NDRG3Q9UGV2 375 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 PSG11Q9UQ72 335 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 GAB2Q9UQC2 676 aa9.75□□□□□ -0.85
USF1-208ENST00000528768 A0A0G2JRQ6 117 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 C15orf65H3BRN8 121 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 HAX1O00165 279 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 F2RL2O00254 374 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 AGPAT2O15120 278 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 IGHV1-46P01743 117 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 H2AFB1P0C5Y9 115 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 CD80P33681 288 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 SSTR5P35346 364 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 PAX9P55771 341 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 UBE2KP61086 200 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 ERVK-16P61578 105 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 AKR1C1Q04828 323 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 ZNF273Q14593 569 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 GUK1Q16774 197 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 Q3ZCU0 254 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.74□□□□□ -0.85
USF1-208ENST00000528768 ADTRPQ96IZ2 230 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 CALYQ9NYX4 217 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 HSPB7Q9UBY9 170 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 METRNQ9UJH8 293 aa9.74□□□□□ -0.85
USF1-208ENST00000528768 IGHV3OR15-7A0A075B7D8 119 aa9.73□□□□□ -0.85
USF1-208ENST00000528768 RBFOX2O43251 390 aaKnown RBP eCLIP9.73□□□□□ -0.85
USF1-208ENST00000528768 RBMXL2O75526 392 aaKnown RBP9.73□□□□□ -0.85
USF1-208ENST00000528768 NXPH3O95157 252 aa9.73□□□□□ -0.85
USF1-208ENST00000528768 HPRT1P00492 218 aa9.73□□□□□ -0.85
USF1-208ENST00000528768 KRASP01116 189 aa9.73□□□□□ -0.85
USF1-208ENST00000528768 CD55P08174 381 aa9.73□□□□□ -0.85
USF1-208ENST00000528768 SFTA3P0C7M3 94 aa9.73□□□□□ -0.85
USF1-208ENST00000528768 IAPPP10997 89 aa9.73□□□□□ -0.85
USF1-208ENST00000528768 TNFRSF9Q07011 255 aa9.73□□□□□ -0.85
USF1-208ENST00000528768 ZNF816Q0VGE8 651 aaPredicted RBP9.73□□□□□ -0.85
USF1-208ENST00000528768 EIF4EBP1Q13541 118 aaPredicted RBP9.73□□□□□ -0.85
USF1-208ENST00000528768 MSMPQ1L6U9 139 aa9.73□□□□□ -0.85
USF1-208ENST00000528768 MORN2Q502X0 79 aa9.73□□□□□ -0.85
USF1-208ENST00000528768 RFESDQ8TAC1 157 aa9.73□□□□□ -0.85
USF1-208ENST00000528768 PINX1Q96BK5 328 aaKnown RBP9.73□□□□□ -0.85
USF1-208ENST00000528768 RBMXL1Q96E39 390 aaKnown RBP9.73□□□□□ -0.85
USF1-208ENST00000528768 PERPQ96FX8 193 aa9.73□□□□□ -0.85
USF1-208ENST00000528768 PSMG3Q9BT73 122 aaPredicted RBP9.73□□□□□ -0.85
USF1-208ENST00000528768 MS4A7Q9GZW8 240 aaPredicted RBP9.73□□□□□ -0.85
USF1-208ENST00000528768 PARP12Q9H0J9 701 aaKnown RBP9.73□□□□□ -0.85
USF1-208ENST00000528768 SH3BGRL3Q9H299 93 aa9.73□□□□□ -0.85
USF1-208ENST00000528768 TMEM231Q9H6L2 316 aa9.73□□□□□ -0.85
USF1-208ENST00000528768 ESRP2Q9H6T0 727 aaKnown RBP9.73□□□□□ -0.85
USF1-208ENST00000528768 IGHV3-43A0A0B4J1X8 118 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 TRAV38-1A0A0B4J264 116 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 A0A1W2PPR1 153 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 ZNF729A6NN14 1252 aaPredicted RBP9.72□□□□□ -0.85
USF1-208ENST00000528768 ST8SIA5O15466 376 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 TMEM50AO95807 157 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 IGHV3-43DP0DP04 118 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 PAX1P15863 534 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 SERF2P84101 59 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 TMEM267Q0VDI3 215 aaPredicted RBP9.72□□□□□ -0.85
USF1-208ENST00000528768 SPANXN5Q5MJ07 72 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 STUMQ69YW2 141 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 Q6ZRM9 215 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 TPRX1Q8N7U7 411 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 RAB39BQ96DA2 213 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 S1PR3Q99500 378 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 RBKSQ9H477 322 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 GCM1Q9NP62 436 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 PLA2G2EQ9NZK7 142 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 FAM96BQ9Y3D0 163 aa9.72□□□□□ -0.85
USF1-208ENST00000528768 KBTBD11-OT1A0A1B0GTJ5 212 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 hADV38S2A0JD32 116 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms