RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 OR8U9P0C7N5 309 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 RRASP10301 218 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 DTYMKP23919 212 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 CD40LGP29965 261 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 TALDO1P37837 337 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 LINC00205P59089 165 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 PITPNAQ00169 270 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 ECSCRQ19T08 205 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 ASPHD1Q5U4P2 390 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 DDB2Q92466 427 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 DCUN1D4Q92564 292 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 ADTRPQ96IZ2 230 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 TMEM68Q96MH6 324 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 ATG5Q9H1Y0 275 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 OR2D2Q9H210 308 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 DCSTAMPQ9H295 470 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 SLA2Q9H6Q3 261 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 SLC35D1Q9NTN3 355 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 SDHAF2Q9NX18 166 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 SSR3Q9UNL2 185 aa8.1□□□□□ -1.11
CPSF1-203ENST00000527916 A8MZ25 164 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 H3BUA1 57 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 BRI3O95415 125 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 CA2P00918 260 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 IGLV2-23P01705 113 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 LGALS1P09382 135 aaKnown RBP8.09□□□□□ -1.11
CPSF1-203ENST00000527916 CTXN2P0C2S0 81 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 PSMB9P28065 219 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 SCAND1P57086 179 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 GNB1P62873 340 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 ARFRP1Q13795 201 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 FXYD3Q14802 87 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 CDNFQ49AH0 187 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 TMEM177Q53S58 311 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 ACTBL2Q562R1 376 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 HACD4Q5VWC8 232 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 UNQ5815/PRO19632Q6UWF5 114 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 H1FOOQ8IZA3 346 aaPredicted RBP8.09□□□□□ -1.11
CPSF1-203ENST00000527916 LFNGQ8NES3 379 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 RHOVQ96L33 236 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 CLCC1Q96S66 551 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 GINS4Q9BRT9 223 aa8.09□□□□□ -1.11
CPSF1-203ENST00000527916 ZNF230Q9UIE0 474 aaPredicted RBP8.09□□□□□ -1.11
CPSF1-203ENST00000527916 A0A0B4J203 849 aa8.08□□□□□ -1.12
CPSF1-203ENST00000527916 LINC01619G3V211 115 aa8.08□□□□□ -1.12
CPSF1-203ENST00000527916 TMEM127O75204 238 aa8.08□□□□□ -1.12
CPSF1-203ENST00000527916 HSPB1P04792 205 aaKnown RBP8.08□□□□□ -1.12
CPSF1-203ENST00000527916 CBX3Q13185 183 aa8.08□□□□□ -1.12
CPSF1-203ENST00000527916 RTL8BQ17RB0 113 aa8.08□□□□□ -1.12
CPSF1-203ENST00000527916 ZNF773Q6PK81 442 aa8.08□□□□□ -1.12
CPSF1-203ENST00000527916 ABHD5Q8WTS1 349 aa8.08□□□□□ -1.12
CPSF1-203ENST00000527916 ARPC1AQ92747 370 aa8.08□□□□□ -1.12
CPSF1-203ENST00000527916 OR4C12Q96R67 309 aa8.08□□□□□ -1.12
CPSF1-203ENST00000527916 FAM103A1Q9BTL3 118 aaKnown RBP8.08□□□□□ -1.12
CPSF1-203ENST00000527916 C19orf73Q9NVV2 129 aa8.08□□□□□ -1.12
CPSF1-203ENST00000527916 RBM7Q9Y580 266 aaKnown RBP8.08□□□□□ -1.12
CPSF1-203ENST00000527916 A0A075B6Q4 140 aa8.07□□□□□ -1.12
CPSF1-203ENST00000527916 A0A0G2JLM5 398 aa8.07□□□□□ -1.12
CPSF1-203ENST00000527916 SLC22A5O76082 557 aa8.07□□□□□ -1.12
CPSF1-203ENST00000527916 DUTP33316 252 aaKnown RBP8.07□□□□□ -1.12
CPSF1-203ENST00000527916 SSBP2P81877 361 aaPredicted RBP8.07□□□□□ -1.12
CPSF1-203ENST00000527916 ACSM6Q6P461 480 aa8.07□□□□□ -1.12
CPSF1-203ENST00000527916 SFXN4Q6P4A7 337 aa8.07□□□□□ -1.12
CPSF1-203ENST00000527916 CNIH2Q6PI25 160 aa8.07□□□□□ -1.12
CPSF1-203ENST00000527916 TEX45Q8NA69 505 aa8.07□□□□□ -1.12
CPSF1-203ENST00000527916 BVESQ8NE79 360 aa8.07□□□□□ -1.12
CPSF1-203ENST00000527916 MAFIPQ8WZ33 124 aa8.07□□□□□ -1.12
CPSF1-203ENST00000527916 DLX4Q92988 240 aaPredicted RBP8.07□□□□□ -1.12
CPSF1-203ENST00000527916 HARBI1Q96MB7 349 aa8.07□□□□□ -1.12
CPSF1-203ENST00000527916 OR5B12Q96R08 314 aa8.07□□□□□ -1.12
CPSF1-203ENST00000527916 ST6GALNAC5Q9BVH7 336 aa8.07□□□□□ -1.12
CPSF1-203ENST00000527916 DAPK2Q9UIK4 370 aa8.07□□□□□ -1.12
CPSF1-203ENST00000527916 ELF5Q9UKW6 265 aaPredicted RBP8.07□□□□□ -1.12
CPSF1-203ENST00000527916 A3GALT2U3KPV4 340 aa8.07□□□□□ -1.12
CPSF1-203ENST00000527916 IGKV1D-8A0A087WSZ0 117 aa8.06□□□□□ -1.12
CPSF1-203ENST00000527916 A0A0A6YYH2 397 aa8.06□□□□□ -1.12
CPSF1-203ENST00000527916 A6NJ64 397 aa8.06□□□□□ -1.12
CPSF1-203ENST00000527916 SRRM4A7MD48 611 aaKnown RBP8.06□□□□□ -1.12
CPSF1-203ENST00000527916 SHOXO15266 292 aa8.06□□□□□ -1.12
CPSF1-203ENST00000527916 CNIH1O95406 144 aa8.06□□□□□ -1.12
CPSF1-203ENST00000527916 HLA-DQB1P01920 261 aa8.06□□□□□ -1.12
CPSF1-203ENST00000527916 SNRPBP14678 240 aaKnown RBP8.06□□□□□ -1.12
CPSF1-203ENST00000527916 SDC2P34741 201 aa8.06□□□□□ -1.12
CPSF1-203ENST00000527916 TPPP2P59282 170 aa8.06□□□□□ -1.12
CPSF1-203ENST00000527916 UBE2KP61086 200 aa8.06□□□□□ -1.12
CPSF1-203ENST00000527916 HAGHQ16775 308 aa8.06□□□□□ -1.12
CPSF1-203ENST00000527916 Q8N1Y9 231 aa8.06□□□□□ -1.12
CPSF1-203ENST00000527916 ZNF645Q8N7E2 425 aa8.06□□□□□ -1.12
CPSF1-203ENST00000527916 POC5Q8NA72 575 aa8.06□□□□□ -1.12
CPSF1-203ENST00000527916 OSR1Q8TAX0 266 aaPredicted RBP8.06□□□□□ -1.12
CPSF1-203ENST00000527916 C5orf30Q96GV9 206 aa8.06□□□□□ -1.12
CPSF1-203ENST00000527916 MS4A10Q96PG2 267 aa8.06□□□□□ -1.12
CPSF1-203ENST00000527916 ALX4Q9H161 411 aaPredicted RBP8.06□□□□□ -1.12
CPSF1-203ENST00000527916 OR51E2Q9H255 320 aa8.06□□□□□ -1.12
CPSF1-203ENST00000527916 RRP15Q9Y3B9 282 aaKnown RBP8.06□□□□□ -1.12
CPSF1-203ENST00000527916 OR2W1Q9Y3N9 320 aa8.06□□□□□ -1.12
CPSF1-203ENST00000527916 IGHV4OR15-8A0A075B7B6 117 aa8.05□□□□□ -1.12
CPSF1-203ENST00000527916 A0A087WW49 117 aa8.05□□□□□ -1.12
CPSF1-203ENST00000527916 SMIM30A4D0T7 59 aa8.05□□□□□ -1.12
CPSF1-203ENST00000527916 LINC00473A8K010 186 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms