RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 IGLV2-14P01704 120 aa8.04□□□□□ -1.12
PRPF40B-204ENST00000527253 NFYAP23511 347 aaPredicted RBP8.04□□□□□ -1.12
PRPF40B-204ENST00000527253 LGALS7P47929 136 aa8.04□□□□□ -1.12
PRPF40B-204ENST00000527253 MXD1Q05195 221 aa8.04□□□□□ -1.12
PRPF40B-204ENST00000527253 VAX1Q5SQQ9 334 aa8.04□□□□□ -1.12
PRPF40B-204ENST00000527253 SLC25A38Q96DW6 304 aa8.04□□□□□ -1.12
PRPF40B-204ENST00000527253 CENPOQ9BU64 300 aa8.04□□□□□ -1.12
PRPF40B-204ENST00000527253 TENM3Q9P273 2699 aa8.04□□□□□ -1.12
PRPF40B-204ENST00000527253 IGKV1D-13A0A0B4J2D9 117 aa8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 OVOL1O14753 267 aa8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 RBMXL2O75526 392 aaKnown RBP8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 HLA-DQB1P01920 261 aa8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 TRGV3P03979 118 aa8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 IGKV1-13P0DP09 117 aa8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 PTHLHP12272 177 aa8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 TGFBR1P36897 503 aa8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 TPPP2P59282 170 aa8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 RPL30P62888 115 aaKnown RBP8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 DEFA5Q01523 94 aa8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 CD69Q07108 199 aa8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 NEDD8Q15843 81 aa8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 PYHIN1Q6K0P9 492 aa8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 HARBI1Q96MB7 349 aa8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 DCSTAMPQ9H295 470 aa8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 RHBDL2Q9NX52 303 aa8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 ZMAT5Q9UDW3 170 aaKnown RBP8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 ZNF256Q9Y2P7 627 aaPredicted RBP8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 RBM7Q9Y580 266 aaKnown RBP8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 STAB2Q8WWQ8 2551 aa8.03□□□□□ -1.12
PRPF40B-204ENST00000527253 LOC100506127A0A0U1RQW1 187 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 SHOXO15266 292 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 CNIH1O95406 144 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 CRYZL1O95825 349 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 HSPB1P04792 205 aaKnown RBP8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 CD36P16671 472 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 BRWD1-AS2P59051 145 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 UBE2KP61086 200 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 TAGLNQ01995 201 aaKnown RBP8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 EIF4EBP1Q13541 118 aaPredicted RBP8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 ARL6IP1Q15041 203 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 PRSS8Q16651 343 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 KCTD21Q4G0X4 260 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 ACSM6Q6P461 480 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 CNIH2Q6PI25 160 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 IDO2Q6ZQW0 420 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 TEX45Q8NA69 505 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 POC5Q8NA72 575 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 SLA2Q9H6Q3 261 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 ANXA10Q9UJ72 324 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 RBMX2Q9Y388 322 aaKnown RBP8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 OR2W1Q9Y3N9 320 aa8.02□□□□□ -1.13
PRPF40B-204ENST00000527253 NBEAL2Q6ZNJ1 2754 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 TRAV18A0A075B6X5 111 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 MSGN1A6NI15 193 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 SAP30O75446 220 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 TUSC2O75896 110 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 APELAP0DMC3 54 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 RRASP10301 218 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 SPNP16150 400 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 INSL3P51460 131 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 GNG2P59768 71 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 RTL8BQ17RB0 113 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 IDNKQ5T6J7 187 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 HAPLN4Q86UW8 402 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 ZNF429Q86V71 674 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 ZNF645Q8N7E2 425 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 GVQW1Q8N7I0 195 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 ADTRPQ96IZ2 230 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 GPHA2Q96T91 129 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 ASCL2Q99929 193 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 TINAGL1Q9GZM7 467 aaPredicted RBP8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 ZNF355PQ9NSJ1 428 aa8.01□□□□□ -1.13
PRPF40B-204ENST00000527253 ANKRD34BA5PLL1 514 aa8□□□□□ -1.13
PRPF40B-204ENST00000527253 H3BUA1 57 aa8□□□□□ -1.13
PRPF40B-204ENST00000527253 FCGR3BO75015 233 aa8□□□□□ -1.13
PRPF40B-204ENST00000527253 BRI3O95415 125 aa8□□□□□ -1.13
PRPF40B-204ENST00000527253 TRBV12-3P01733 135 aa8□□□□□ -1.13
PRPF40B-204ENST00000527253 FCER2P06734 321 aa8□□□□□ -1.13
PRPF40B-204ENST00000527253 CTXN2P0C2S0 81 aa8□□□□□ -1.13
PRPF40B-204ENST00000527253 SAA1P0DJI8 122 aaPredicted RBP8□□□□□ -1.13
PRPF40B-204ENST00000527253 PITPNAQ00169 270 aa8□□□□□ -1.13
PRPF40B-204ENST00000527253 DYRK1AQ13627 763 aa8□□□□□ -1.13
PRPF40B-204ENST00000527253 VMA21Q3ZAQ7 101 aa8□□□□□ -1.13
PRPF40B-204ENST00000527253 OR2B11Q5JQS5 317 aa8□□□□□ -1.13
PRPF40B-204ENST00000527253 C10orf55Q5SWW7 151 aa8□□□□□ -1.13
PRPF40B-204ENST00000527253 IL34Q6ZMJ4 242 aa8□□□□□ -1.13
PRPF40B-204ENST00000527253 HOGA1Q86XE5 327 aa8□□□□□ -1.13
PRPF40B-204ENST00000527253 ADAD2Q8NCV1 583 aaKnown RBP8□□□□□ -1.13
PRPF40B-204ENST00000527253 OSR1Q8TAX0 266 aaPredicted RBP8□□□□□ -1.13
PRPF40B-204ENST00000527253 YIPF6Q96EC8 236 aa8□□□□□ -1.13
PRPF40B-204ENST00000527253 AUNIPQ9H7T9 357 aa8□□□□□ -1.13
PRPF40B-204ENST00000527253 ZNF430Q9H8G1 570 aaPredicted RBP8□□□□□ -1.13
PRPF40B-204ENST00000527253 ADAM30Q9UKF2 790 aa8□□□□□ -1.13
PRPF40B-204ENST00000527253 C13orf42A0A1B0GVH6 325 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 A0A1B0GW64 132 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 SCGNO76038 276 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 LY86O95711 162 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 PRH1P02810 166 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 CD40LGP29965 261 aa7.99□□□□□ -1.13
PRPF40B-204ENST00000527253 RPS19P39019 145 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms