RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 HTR1DP28221 377 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 UBE2E1P51965 193 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 LGALS4P56470 323 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 RPL30P62888 115 aaKnown RBP10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 UBA52P62987 128 aaKnown RBP10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 TAGLNQ01995 201 aaKnown RBP10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 PRB3Q04118 309 aaPredicted RBP10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 KLRD1Q13241 179 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 C9orf139Q6ZV77 190 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 AKAP14Q86UN6 197 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 TGIF2LXQ8IUE1 241 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 ZNF695Q8IW36 515 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 SIGLECL1Q8N7X8 197 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 OR4P4Q8NGL7 312 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 LHX4Q969G2 390 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 SOX21Q9Y651 276 aaPredicted RBP10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 LINC00473A8K010 186 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 ODF3BA8MYP8 253 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 GOSR2O14653 212 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 TXNL1O43396 289 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 ATG12O94817 140 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 CDS2O95674 445 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 IFNA21P01568 189 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 LPAR6P43657 344 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 MINOS1Q5TGZ0 78 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 TMEM268Q5VZI3 342 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 HCP5Q6MZN7 132 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 C12orf54Q6X4T0 127 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 SPAG16Q8N0X2 631 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 LRTM2Q8N967 370 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 DRAXINQ8NBI3 349 aaPredicted RBP10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 IL22RA2Q969J5 263 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 ST6GALNAC6Q969X2 333 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 RPEQ96AT9 228 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 TMEM56Q96MV1 263 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 RAB18Q9NP72 206 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 PRR13Q9NZ81 148 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 DPM3Q9P2X0 92 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 MINOS1-NBL1R4GNA1 71 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 TMEM56-RWDD3S4R434 201 aa10.25□□□□□ -0.77
SSSCA1-203ENST00000526877 IGHV3OR16-10A0A075B7F0 116 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 DUXBA0A1W2PPF3 345 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 DBX1A6NMT0 343 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 FCGR3BO75015 233 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 CCNKO75909 580 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 APOA2P02652 100 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 HOXB5P09067 269 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 CT45A6P0DMU7 189 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 CT45A5P0DMU8 189 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 CT45A7P0DMV0 189 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 RRASP10301 218 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 HLA-GP17693 338 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 RTL8BQ17RB0 113 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 OR2B11Q5JQS5 317 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 GSG1LQ6UXU4 331 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 PDZD9Q8IXQ8 264 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 SELENOHQ8IZQ5 122 aaKnown RBP10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 ZNF383Q8NA42 475 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 OR11H7Q8NGC8 314 aa10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 RBPMSQ93062 196 aaKnown RBP10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 MRPL20Q9BYC9 149 aaKnown RBP10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 TBL2Q9Y4P3 447 aaKnown RBP10.24□□□□□ -0.77
SSSCA1-203ENST00000526877 C13orf42A0A1B0GVH6 325 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 A0A1W2PRD5 423 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 A0A1W2PRF3 423 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 A0A1W2PRM7 423 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 C5orf51A6NDU8 294 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 FAM25EA8MYX2 175 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 LY6LH3BQJ8 138 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 RBFOX2O43251 390 aaKnown RBP eCLIP10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 HPRT1P00492 218 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 CXCL3P19876 107 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 MC5RP33032 325 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 REG1BP48304 166 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 LINC00205P59089 165 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 CD83Q01151 205 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 ZNF816Q0VGE8 651 aaPredicted RBP10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 MIDNQ504T8 468 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 ZNF585BQ52M93 769 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 TPTE2P1Q5T6R2 138 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 GPR157Q5UAW9 335 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 DHRS7BQ6IAN0 325 aaPredicted RBP10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 OR4S2Q8NH73 311 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 RNASE11Q8TAA1 199 aaKnown RBP10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 DDB2Q92466 427 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 NABP2Q9BQ15 211 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 PDCD10Q9BUL8 212 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 ZNF436Q9C0F3 470 aaPredicted RBP10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 MS4A7Q9GZW8 240 aaPredicted RBP10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 PRDM13Q9H4Q3 707 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 SLC35D1Q9NTN3 355 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 TMED3Q9Y3Q3 217 aa10.23□□□□□ -0.77
SSSCA1-203ENST00000526877 CENPVL3A0A0U1RRI6 287 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 DNAJC9-AS1A6NH13 148 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 OOSP1A8MZH6 123 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 H7C2Y5 167 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 HAX1O00165 279 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 CCSO14618 274 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 NPFFO15130 113 aa10.22□□□□□ -0.77
SSSCA1-203ENST00000526877 RAMP3O60896 148 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms