RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 FXYD4P59646 89 aa12.73□□□□□ -0.37
SSSCA1-202ENST00000526433 CFHR3Q02985 330 aa12.73□□□□□ -0.37
SSSCA1-202ENST00000526433 EIF4EBP1Q13541 118 aaPredicted RBP12.73□□□□□ -0.37
SSSCA1-202ENST00000526433 MFSD4AQ8N468 514 aa12.73□□□□□ -0.37
SSSCA1-202ENST00000526433 OR4F17Q8NGA8 305 aa12.73□□□□□ -0.37
SSSCA1-202ENST00000526433 HARBI1Q96MB7 349 aa12.73□□□□□ -0.37
SSSCA1-202ENST00000526433 OR4F4Q96R69 305 aa12.73□□□□□ -0.37
SSSCA1-202ENST00000526433 ABHD1Q96SE0 405 aa12.73□□□□□ -0.37
SSSCA1-202ENST00000526433 HSD17B10Q99714 261 aaKnown RBP12.73□□□□□ -0.37
SSSCA1-202ENST00000526433 ZFP57Q9NU63 452 aa12.73□□□□□ -0.37
SSSCA1-202ENST00000526433 PRELID3BQ9Y3B1 194 aa12.73□□□□□ -0.37
SSSCA1-202ENST00000526433 TNCP24821 2201 aa12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 FCGR3BO75015 233 aa12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 CRYGBP07316 175 aa12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 RCVRNP35243 200 aa12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 HRH1P35367 487 aa12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 HERV-K104P61576 105 aa12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 FOXE3Q13461 319 aa12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 MSMO1Q15800 293 aa12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 RNASE12Q5GAN4 147 aaKnown RBP12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 ZNF562Q6V9R5 426 aa12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 ZNF66Q6ZN08 573 aa12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 KCTD9Q7L273 389 aa12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 LAX1Q8IWV1 398 aa12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 ZBTB34Q8NCN2 500 aa12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 GPHA2Q96T91 129 aa12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 ZNF2Q9BSG1 426 aaPredicted RBP12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 DCUN1D5Q9BTE7 237 aa12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 TPSG1Q9NRR2 321 aa12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 TAS2R8Q9NYW2 309 aa12.72□□□□□ -0.37
SSSCA1-202ENST00000526433 NOTCH3Q9UM47 2321 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 TRAV41A0A0B4J266 112 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 CCDC160A6NGH7 325 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 CA2P00918 260 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 IGHG4P01861 327 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 ELANEP08246 267 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 EGR2P11161 476 aaPredicted RBP12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 PPIFP30405 207 aaKnown RBP12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 RPL23AP62750 156 aaKnown RBP12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 NDPQ00604 133 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 OR2B11Q5JQS5 317 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 CXorf66Q5JRM2 361 aaPredicted RBP12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 LCNL1Q6ZST4 164 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 PPP1R27Q86WC6 154 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 OR6F1Q8NGZ6 308 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 OR52I2Q8NH67 350 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 OSR1Q8TAX0 266 aaPredicted RBP12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 ABHD5Q8WTS1 349 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 C15orf40Q8WUR7 153 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 TCTEX1D2Q8WW35 142 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 SLIRPQ9GZT3 109 aaKnown RBP12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 KLK11Q9UBX7 282 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 FBXO7Q9Y3I1 522 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 NUBP2Q9Y5Y2 271 aa12.71□□□□□ -0.37
SSSCA1-202ENST00000526433 TNFSF12O43508 249 aa12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 RPLP1P05386 114 aaKnown RBP12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 PF4V1P10720 104 aa12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 GNRHRP30968 328 aa12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 BRWD1-AS2P59051 145 aa12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 TMEM267Q0VDI3 215 aaPredicted RBP12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 PJVKQ0ZLH3 352 aa12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 C18orf65Q6ZTR6 163 aa12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 TMEM17Q86X19 198 aa12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 RNF152Q8N8N0 203 aa12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 TEX45Q8NA69 505 aa12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 FCAMRQ8WWV6 532 aa12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 MOB3AQ96BX8 217 aa12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 DIRAS2Q96HU8 199 aa12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 C6orf62Q9GZU0 229 aaPredicted RBP12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 MTFP1Q9UDX5 166 aa12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 A3GALT2U3KPV4 340 aa12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 NOTCH1P46531 2555 aa12.7□□□□□ -0.38
SSSCA1-202ENST00000526433 ARPC1BO15143 372 aaKnown RBP12.69□□□□□ -0.38
SSSCA1-202ENST00000526433 CNIH1O95406 144 aa12.69□□□□□ -0.38
SSSCA1-202ENST00000526433 CRIP2P52943 208 aaPredicted RBP12.69□□□□□ -0.38
SSSCA1-202ENST00000526433 UBE2KP61086 200 aa12.69□□□□□ -0.38
SSSCA1-202ENST00000526433 TSPAN5P62079 268 aa12.69□□□□□ -0.38
SSSCA1-202ENST00000526433 FXYD3Q14802 87 aa12.69□□□□□ -0.38
SSSCA1-202ENST00000526433 ECSCRQ19T08 205 aa12.69□□□□□ -0.38
SSSCA1-202ENST00000526433 VMA21Q3ZAQ7 101 aa12.69□□□□□ -0.38
SSSCA1-202ENST00000526433 ZNF818PQ6ZRF7 136 aa12.69□□□□□ -0.38
SSSCA1-202ENST00000526433 MINDY2Q8NBR6 621 aa12.69□□□□□ -0.38
SSSCA1-202ENST00000526433 MCFD2Q8NI22 146 aa12.69□□□□□ -0.38
SSSCA1-202ENST00000526433 FAM103A1Q9BTL3 118 aaKnown RBP12.69□□□□□ -0.38
SSSCA1-202ENST00000526433 NXF2Q9GZY0 626 aaKnown RBP12.69□□□□□ -0.38
SSSCA1-202ENST00000526433 RBM38Q9H0Z9 239 aaKnown RBP12.69□□□□□ -0.38
SSSCA1-202ENST00000526433 NUDT19A8MXV4 375 aa12.68□□□□□ -0.38
SSSCA1-202ENST00000526433 IGLV1-40P01703 118 aa12.68□□□□□ -0.38
SSSCA1-202ENST00000526433 PSMB8P28062 276 aa12.68□□□□□ -0.38
SSSCA1-202ENST00000526433 GNB1P62873 340 aa12.68□□□□□ -0.38
SSSCA1-202ENST00000526433 MRGPRG-AS1Q2M3A8 158 aa12.68□□□□□ -0.38
SSSCA1-202ENST00000526433 C19orf54Q5BKX5 351 aa12.68□□□□□ -0.38
SSSCA1-202ENST00000526433 UNQ5815/PRO19632Q6UWF5 114 aa12.68□□□□□ -0.38
SSSCA1-202ENST00000526433 LFNGQ8NES3 379 aa12.68□□□□□ -0.38
SSSCA1-202ENST00000526433 OR4S2Q8NH73 311 aa12.68□□□□□ -0.38
SSSCA1-202ENST00000526433 ARPC1AQ92747 370 aa12.68□□□□□ -0.38
SSSCA1-202ENST00000526433 BORCS5Q969J3 196 aa12.68□□□□□ -0.38
SSSCA1-202ENST00000526433 KLK15Q9H2R5 256 aa12.68□□□□□ -0.38
SSSCA1-202ENST00000526433 RSL24D1Q9UHA3 163 aaKnown RBP12.68□□□□□ -0.38
SSSCA1-202ENST00000526433 GABARAPH6UMI1 98 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms