RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 C2orf68Q2NKX9 166 aa11.91□□□□□ -0.5
SF3B2-202ENST00000524475 NDUFA11Q86Y39 141 aa11.91□□□□□ -0.5
SF3B2-202ENST00000524475 MFSD4AQ8N468 514 aa11.91□□□□□ -0.5
SF3B2-202ENST00000524475 TMEM229BQ8NBD8 167 aa11.91□□□□□ -0.5
SF3B2-202ENST00000524475 BVESQ8NE79 360 aa11.91□□□□□ -0.5
SF3B2-202ENST00000524475 OR4X2Q8NGF9 303 aa11.91□□□□□ -0.5
SF3B2-202ENST00000524475 RBMXL1Q96E39 390 aaKnown RBP11.91□□□□□ -0.5
SF3B2-202ENST00000524475 HARBI1Q96MB7 349 aa11.91□□□□□ -0.5
SF3B2-202ENST00000524475 SLC5A7Q9GZV3 580 aa11.91□□□□□ -0.5
SF3B2-202ENST00000524475 FBXL15Q9H469 300 aa11.91□□□□□ -0.5
SF3B2-202ENST00000524475 CCL28Q9NRJ3 127 aa11.91□□□□□ -0.5
SF3B2-202ENST00000524475 J3QRK9 145 aa11.9□□□□□ -0.5
SF3B2-202ENST00000524475 RBFOX2O43251 390 aaKnown RBP eCLIP11.9□□□□□ -0.53e-6■■■■□ 22.3
SF3B2-202ENST00000524475 GSTZ1O43708 216 aaPredicted RBP11.9□□□□□ -0.5
SF3B2-202ENST00000524475 CRYGBP07316 175 aa11.9□□□□□ -0.5
SF3B2-202ENST00000524475 GNRHRP30968 328 aa11.9□□□□□ -0.5
SF3B2-202ENST00000524475 UCP3P55916 312 aa11.9□□□□□ -0.5
SF3B2-202ENST00000524475 TAS2R19P59542 299 aa11.9□□□□□ -0.5
SF3B2-202ENST00000524475 RPL30P62888 115 aaKnown RBP11.9□□□□□ -0.5
SF3B2-202ENST00000524475 CFHR3Q02985 330 aa11.9□□□□□ -0.5
SF3B2-202ENST00000524475 IL18Q14116 193 aa11.9□□□□□ -0.5
SF3B2-202ENST00000524475 ARRDC1Q8N5I2 433 aa11.9□□□□□ -0.5
SF3B2-202ENST00000524475 OR4S2Q8NH73 311 aa11.9□□□□□ -0.5
SF3B2-202ENST00000524475 NOL4LQ96MY1 436 aaPredicted RBP11.9□□□□□ -0.5
SF3B2-202ENST00000524475 FXYD6Q9H0Q3 95 aa11.9□□□□□ -0.5
SF3B2-202ENST00000524475 OR51J1Q9H342 316 aa11.9□□□□□ -0.5
SF3B2-202ENST00000524475 METTL1Q9UBP6 276 aaKnown RBP11.9□□□□□ -0.5
SF3B2-202ENST00000524475 LINC01548A6NM66 108 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 SHOXO15266 292 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 CRYZL1O95825 349 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 OPN1MWP04001 364 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 OPN1MW2P0DN77 364 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 OPN1MW3P0DN78 364 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 CD28P10747 220 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 PTBP1P26599 531 aaKnown RBP eCLIP11.89□□□□□ -0.51
SF3B2-202ENST00000524475 S100A5P33763 92 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 FXYD4P59646 89 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 UBE2KP61086 200 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 TSPAN5P62079 268 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 DGCR2P98153 550 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 CATR1Q13166 79 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 PLGLAQ15195 96 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 RNASE10Q5GAN6 216 aaKnown RBP11.89□□□□□ -0.51
SF3B2-202ENST00000524475 TCTEX1D4Q5JR98 221 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 LPCAT3Q6P1A2 487 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 ZNF562Q6V9R5 426 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 ZNF818PQ6ZRF7 136 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 PPP1R27Q86WC6 154 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 TMEM17Q86X19 198 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 RNF152Q8N8N0 203 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 TCTEX1D2Q8WW35 142 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 CITED2Q99967 270 aaPredicted RBP11.89□□□□□ -0.51
SF3B2-202ENST00000524475 TAS2R8Q9NYW2 309 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 NBEAL1Q6ZS30 2694 aa11.89□□□□□ -0.51
SF3B2-202ENST00000524475 TNCP24821 2201 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 DPPA5A6NC42 116 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 FABP12A6NFH5 140 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 SRRM4A7MD48 611 aaKnown RBP11.88□□□□□ -0.51
SF3B2-202ENST00000524475 ADARB2-AS1A8MUL3 147 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 SLC25A17O43808 307 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 FCGR3BO75015 233 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 CD3DP04234 171 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 CSF1P09603 554 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 ETV6P41212 452 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 BRWD1-AS2P59051 145 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 CX3CL1P78423 397 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 NDPQ00604 133 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 VMA21Q3ZAQ7 101 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 LHFPL1Q86WI0 220 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 CMTM1Q8IZ96 169 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 TCTEX1D1Q8N7M0 179 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 TEX45Q8NA69 505 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 CD300LFQ8TDQ1 290 aa11.88□□□□□ -0.51
SF3B2-202ENST00000524475 TSSC4Q9Y5U2 329 aaPredicted RBP11.88□□□□□ -0.51
SF3B2-202ENST00000524475 GPR31O00270 319 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 ATP6V0E1O15342 81 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 IGHG4P01861 327 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 IFNA6P05013 189 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 ELANEP08246 267 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 VDAC1P21796 283 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 PPIFP30405 207 aaKnown RBP11.87□□□□□ -0.51
SF3B2-202ENST00000524475 SLC6A1P30531 599 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 FOXE3Q13461 319 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 MEF2DQ14814 521 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 C19orf54Q5BKX5 351 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 AADACL3Q5VUY0 350 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 FOXB2Q5VYV0 432 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 STEAP1BQ6NZ63 245 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 TEX38Q6PEX7 206 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 CCDC190Q86UF4 302 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 C11orf44Q8N8P7 122 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 AIFM2Q9BRQ8 373 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 FAM212BQ9NTI7 297 aaPredicted RBP11.87□□□□□ -0.51
SF3B2-202ENST00000524475 ZFP57Q9NU63 452 aa11.87□□□□□ -0.51
SF3B2-202ENST00000524475 M0QYG6 137 aa11.86□□□□□ -0.51
SF3B2-202ENST00000524475 FCN1O00602 326 aa11.86□□□□□ -0.51
SF3B2-202ENST00000524475 CREBL2O60519 120 aaPredicted RBP11.86□□□□□ -0.51
SF3B2-202ENST00000524475 CA2P00918 260 aa11.86□□□□□ -0.51
SF3B2-202ENST00000524475 POU2AF1Q16633 256 aa11.86□□□□□ -0.51
SF3B2-202ENST00000524475 RNASE12Q5GAN4 147 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms