RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 TNFSF10P50591 281 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 RPL30P62888 115 aaKnown RBP8.6□□□□□ -1.03
SPIDR-225ENST00000524141 RPP30P78346 268 aaKnown RBP8.6□□□□□ -1.03
SPIDR-225ENST00000524141 TRA2AQ13595 282 aaKnown RBP eCLIP8.6□□□□□ -1.03
SPIDR-225ENST00000524141 TCF23Q7RTU1 214 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 TUSC5Q8IXB3 177 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 Q8N7P7 452 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 PHF7Q9BWX1 381 aaPredicted RBP8.6□□□□□ -1.03
SPIDR-225ENST00000524141 DEPPQ9NTK1 212 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 TRBV9A0A0B4J1U6 114 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 TRAV38-1A0A0B4J264 116 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 GRIFINA4D1Z8 144 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 GALR2O43603 387 aaPredicted RBP8.6□□□□□ -1.03
SPIDR-225ENST00000524141 CXorf1O96002 111 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 DEFA4P12838 97 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 IRF2P14316 349 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 PLA2G5P39877 138 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 OPRK1P41145 380 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 RPL19P84098 196 aaKnown RBP8.6□□□□□ -1.03
SPIDR-225ENST00000524141 ZNF90Q03938 601 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 IGFBP7Q16270 282 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 ZNF114Q8NC26 417 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 IFI44Q8TCB0 444 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 HLA-CQ95604 372 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 QTRT1Q9BXR0 403 aaKnown RBP8.6□□□□□ -1.03
SPIDR-225ENST00000524141 IL36BQ9NZH7 164 aa8.6□□□□□ -1.03
SPIDR-225ENST00000524141 EYSQ5T1H1 3165 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 TRBV20OR9-2A0A075B6H5 130 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 C15orf62A8K5M9 175 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 J3QW42 95 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 BRS3P32247 399 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 LHX2P50458 406 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 ZNF808Q8N4W9 903 aaPredicted RBP8.59□□□□□ -1.03
SPIDR-225ENST00000524141 SCCPDHQ8NBX0 429 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 OR4B1Q8NGF8 309 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 HSPB9Q9BQS6 159 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 OOEPA6NGQ2 149 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 C17orf98A8MV24 154 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 A8MXE2 369 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 SERF1AO75920 110 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 ARL14EPLP0DKL9 152 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 SPINK2P20155 84 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 FOXG1P55316 489 aaPredicted RBP8.59□□□□□ -1.03
SPIDR-225ENST00000524141 EDDM3BP56851 147 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 SRYQ05066 204 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 CYB5R2Q6BCY4 276 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 MYPOPQ86VE0 399 aaPredicted RBP8.59□□□□□ -1.03
SPIDR-225ENST00000524141 NANOS1Q8WY41 292 aaKnown RBP8.59□□□□□ -1.03
SPIDR-225ENST00000524141 HSD17B10Q99714 261 aaKnown RBP8.59□□□□□ -1.03
SPIDR-225ENST00000524141 SAMD10Q9BYL1 202 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 MRPL18Q9H0U6 180 aaKnown RBP8.59□□□□□ -1.03
SPIDR-225ENST00000524141 LPAR2Q9HBW0 351 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 B4GALT7Q9UBV7 327 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 LY96Q9Y6Y9 160 aa8.59□□□□□ -1.03
SPIDR-225ENST00000524141 PGPEP1LA6NFU8 196 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 NEURL1O76050 574 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 STAG3L2P0CL84 134 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 STAG3L3P0CL85 134 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 CBLN1P23435 193 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 Q0VG73 95 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 PDLIM3Q53GG5 364 aaPredicted RBP8.58□□□□□ -1.04
SPIDR-225ENST00000524141 BAGE3Q86Y29 109 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 BAGE2Q86Y30 109 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 OR2J1Q9GZK6 312 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 TP53TG3Q9ULZ0 132 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 PAM16Q9Y3D7 125 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 KMT2EQ8IZD2 1858 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 C12orf77C9JDV5 145 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 C3orf80F5H4A9 247 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 NPSP0C0P6 89 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 BMP5P22003 454 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 RPS16P62249 146 aaKnown RBP8.58□□□□□ -1.04
SPIDR-225ENST00000524141 TGFBR3Q03167 851 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 TRIP6Q15654 476 aaKnown RBP8.58□□□□□ -1.04
SPIDR-225ENST00000524141 GCSAMLQ5JQS6 135 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 COL5A1-AS1Q5SY13 56 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 LYSMD4Q5XG99 296 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 C5orf30Q96GV9 206 aa8.58□□□□□ -1.04
SPIDR-225ENST00000524141 ZNF703Q9H7S9 590 aaPredicted RBP8.58□□□□□ -1.04
SPIDR-225ENST00000524141 SCO2A0A1W2PP80 73 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 PINLYPA6NC86 204 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 FAM90A9PA6NNJ1 464 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 C9JCJ5 164 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 WISP2O76076 250 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 HAND1O96004 215 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 MT-CO2P00403 227 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 CCL4P13236 92 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 OTX2P32243 289 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 CLDN18P56856 261 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 LINC00310P59036 64 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 BRWD1-AS2P59051 145 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 Q0VFX4 171 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 GTF3C1Q12789 2109 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 OR1C1Q15619 314 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 SLC35E4Q6ICL7 350 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 PPP1R32Q7Z5V6 425 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 WDR86Q86TI4 376 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 SIGLECL1Q8N7X8 197 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 OCC1Q8TAD7 63 aa8.57□□□□□ -1.04
SPIDR-225ENST00000524141 VN1R17PQ8TDU5 208 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms