RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 NDUFAB1O14561 156 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 MRPS12O15235 138 aaKnown RBP3.18□□□□□ -1.9
CPNE3-206ENST00000523469 GMDSO60547 372 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 DEDDO75618 318 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 RAB36O95755 333 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 GABRA3P34903 492 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 MAS1LP35410 378 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 CX3CR1P49238 355 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 P2RX1P51575 399 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 ACTG2P63267 376 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 STX3Q13277 289 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 QPRTQ15274 297 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 TSNQ15631 228 aaKnown RBP3.18□□□□□ -1.9
CPNE3-206ENST00000523469 TOMM34Q15785 309 aaPredicted RBP3.18□□□□□ -1.9
CPNE3-206ENST00000523469 ARHGAP11BQ3KRB8 267 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 THEM4Q5T1C6 240 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 ZNF684Q5T5D7 378 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 ARL9Q6T311 187 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 CYP4Z1Q86W10 505 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 ZNF101Q8IZC7 436 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 SLC7A5P1Q8MH63 180 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 MMGT1Q8N4V1 131 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 OR51D1Q8NGF3 324 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 C11orf40Q8WZ69 217 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 ZNF649Q9BS31 505 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 GLS2Q9UI32 602 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 CES1P1Q9UKY3 287 aa3.18□□□□□ -1.9
CPNE3-206ENST00000523469 IGKV1D-17A0A075B6S4 117 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 SCN2BO60939 215 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 HSBP1O75506 76 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 SEMA3DO95025 777 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 CCNB2O95067 398 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 FARS2O95363 451 aaKnown RBP3.17□□□□□ -1.9
CPNE3-206ENST00000523469 IGKV1D-16P01601 117 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 IGHV1-46P01743 117 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 HLA-HP01893 362 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 IFNA6P05013 189 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 ZNF35P13682 527 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 ZNF138P52744 262 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 RAB25P57735 213 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 MYL5Q02045 173 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 PMS2P3Q13401 168 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 MAPRE2Q15555 327 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 NDUFAF6Q330K2 333 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 SOHLH1Q5JUK2 328 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 FAM45BPQ6NSW5 357 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 NOXRED1Q6NXP6 359 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 SLC25A34Q6PIV7 304 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 CEMP1Q6PRD7 247 aaPredicted RBP3.17□□□□□ -1.9
CPNE3-206ENST00000523469 ZNF836Q6ZNA1 936 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 LRRC28Q86X40 367 aaPredicted RBP3.17□□□□□ -1.9
CPNE3-206ENST00000523469 OR10J6PQ8NGY7 276 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 FAM45AQ8TCE6 357 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 ZNF382Q96SR6 550 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 SERPINI1Q99574 410 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 NAPGQ99747 312 aaPredicted RBP3.17□□□□□ -1.9
CPNE3-206ENST00000523469 ATP5SQ99766 215 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 MAP1LC3CQ9BXW4 147 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 ZC4H2Q9NQZ6 224 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 UBQLN4Q9NRR5 601 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 TMEM106BQ9NUM4 274 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 OPTCQ9UBM4 332 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 TSSC4Q9Y5U2 329 aaPredicted RBP3.17□□□□□ -1.9
CPNE3-206ENST00000523469 KMT2AQ03164 3969 aa3.17□□□□□ -1.9
CPNE3-206ENST00000523469 A0A1W2PQD3 144 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 A0A1W2PRF3 423 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 A0A1W2PRM7 423 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 RFXANKO14593 260 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 EIF1BO60739 113 aaKnown RBP3.16□□□□□ -1.9
CPNE3-206ENST00000523469 IGF2P01344 180 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 IGKV1-17P01599 117 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 LINC00869P0C866 280 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 RAB3BP20337 219 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 PSMB6P28072 239 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 CD40LGP29965 261 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 AQP2P41181 271 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 RWDD2BP57060 319 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 ERVS71-1P61550 626 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 SLC35A1P78382 337 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 TNFAIP6P98066 277 aaPredicted RBP3.16□□□□□ -1.9
CPNE3-206ENST00000523469 RGNQ15493 299 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 ATP6AP1LQ52LC2 224 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 ANKRD26P1Q6NSI1 321 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 C8orf74Q6P047 294 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 NEGR1Q7Z3B1 354 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 MTERF4Q7Z6M4 381 aaKnown RBP3.16□□□□□ -1.9
CPNE3-206ENST00000523469 OR4X2Q8NGF9 303 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 SLC7A13Q8TCU3 470 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 TCP10LQ8TDR4 215 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 GPR119Q8TDV5 335 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 CAPSLQ8WWF8 208 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 TMEM234Q8WY98 164 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 SEH1LQ96EE3 360 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 CHMP6Q96FZ7 201 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 SAV1Q9H4B6 383 aaPredicted RBP3.16□□□□□ -1.9
CPNE3-206ENST00000523469 NKIRAS1Q9NYS0 192 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 FBXL3Q9UKT7 428 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 GOLT1BQ9Y3E0 138 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 HDGFL3Q9Y3E1 203 aa3.16□□□□□ -1.9
CPNE3-206ENST00000523469 SAR1BQ9Y6B6 198 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms