RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 LGALS7P47929 136 aa11.74□□□□□ -0.53
MRPS28-209ENST00000522987 OR10A3P58181 314 aa11.74□□□□□ -0.53
MRPS28-209ENST00000522987 MRPS15P82914 257 aaKnown RBP11.74□□□□□ -0.53
MRPS28-209ENST00000522987 FABP5Q01469 135 aa11.74□□□□□ -0.53
MRPS28-209ENST00000522987 RPEL1Q2QD12 228 aa11.74□□□□□ -0.53
MRPS28-209ENST00000522987 RNLSQ5VYX0 342 aa11.74□□□□□ -0.53
MRPS28-209ENST00000522987 OR4A4PQ8NGN8 299 aa11.74□□□□□ -0.53
MRPS28-209ENST00000522987 OR10J5Q8NHC4 309 aa11.74□□□□□ -0.53
MRPS28-209ENST00000522987 ACOT12Q8WYK0 555 aa11.74□□□□□ -0.53
MRPS28-209ENST00000522987 PLEKHA3Q9HB20 300 aa11.74□□□□□ -0.53
MRPS28-209ENST00000522987 H3BUA1 57 aa11.73□□□□□ -0.53
MRPS28-209ENST00000522987 MPPED1O15442 326 aa11.73□□□□□ -0.53
MRPS28-209ENST00000522987 CRYZL1O95825 349 aa11.73□□□□□ -0.53
MRPS28-209ENST00000522987 EDN2P20800 178 aa11.73□□□□□ -0.53
MRPS28-209ENST00000522987 CBX3Q13185 183 aa11.73□□□□□ -0.53
MRPS28-209ENST00000522987 MRGPRG-AS1Q2M3A8 158 aa11.73□□□□□ -0.53
MRPS28-209ENST00000522987 C10orf55Q5SWW7 151 aa11.73□□□□□ -0.53
MRPS28-209ENST00000522987 ZNF343Q6P1L6 599 aa11.73□□□□□ -0.53
MRPS28-209ENST00000522987 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.73□□□□□ -0.53
MRPS28-209ENST00000522987 RAB3CQ96E17 227 aa11.73□□□□□ -0.53
MRPS28-209ENST00000522987 LYSTQ99698 3801 aa11.73□□□□□ -0.53
MRPS28-209ENST00000522987 SPATA25Q9BR10 227 aa11.73□□□□□ -0.53
MRPS28-209ENST00000522987 NKX1-2Q9UD57 310 aaPredicted RBP11.73□□□□□ -0.53
MRPS28-209ENST00000522987 V9GY05 133 aa11.73□□□□□ -0.53
MRPS28-209ENST00000522987 EPPK1P58107 5090 aaKnown RBP11.73□□□□□ -0.53
MRPS28-209ENST00000522987 SMIM30A4D0T7 59 aa11.72□□□□□ -0.53
MRPS28-209ENST00000522987 H0Y980 276 aa11.72□□□□□ -0.53
MRPS28-209ENST00000522987 ARL6IP5O75915 188 aa11.72□□□□□ -0.53
MRPS28-209ENST00000522987 AQP4P55087 323 aa11.72□□□□□ -0.53
MRPS28-209ENST00000522987 TPBGQ13641 420 aa11.72□□□□□ -0.53
MRPS28-209ENST00000522987 RTL8BQ17RB0 113 aa11.72□□□□□ -0.53
MRPS28-209ENST00000522987 OR2B11Q5JQS5 317 aa11.72□□□□□ -0.53
MRPS28-209ENST00000522987 C19orf35Q6ZS72 473 aa11.72□□□□□ -0.53
MRPS28-209ENST00000522987 GTSCR1Q86UQ5 136 aa11.72□□□□□ -0.53
MRPS28-209ENST00000522987 GINS4Q9BRT9 223 aa11.72□□□□□ -0.53
MRPS28-209ENST00000522987 CABLES2Q9BTV7 478 aa11.72□□□□□ -0.53
MRPS28-209ENST00000522987 WFDC10AQ9H1F0 79 aa11.72□□□□□ -0.53
MRPS28-209ENST00000522987 VCXQ9H320 206 aa11.72□□□□□ -0.53
MRPS28-209ENST00000522987 ELF5Q9UKW6 265 aaPredicted RBP11.72□□□□□ -0.53
MRPS28-209ENST00000522987 IGKV1D-8A0A087WSZ0 117 aa11.71□□□□□ -0.53
MRPS28-209ENST00000522987 LINC00473A8K010 186 aa11.71□□□□□ -0.53
MRPS28-209ENST00000522987 A8MZ25 164 aa11.71□□□□□ -0.53
MRPS28-209ENST00000522987 RGS10O43665 173 aa11.71□□□□□ -0.53
MRPS28-209ENST00000522987 AADACP22760 399 aa11.71□□□□□ -0.53
MRPS28-209ENST00000522987 SERPINB10P48595 397 aa11.71□□□□□ -0.53
MRPS28-209ENST00000522987 RHOGP84095 191 aa11.71□□□□□ -0.53
MRPS28-209ENST00000522987 EXOSC2Q13868 293 aaKnown RBP11.71□□□□□ -0.53
MRPS28-209ENST00000522987 TMEM177Q53S58 311 aa11.71□□□□□ -0.53
MRPS28-209ENST00000522987 LCN12Q6JVE5 192 aa11.71□□□□□ -0.53
MRPS28-209ENST00000522987 ADAD2Q8NCV1 583 aaKnown RBP11.71□□□□□ -0.53
MRPS28-209ENST00000522987 SRSF12Q8WXF0 261 aaKnown RBP11.71□□□□□ -0.53
MRPS28-209ENST00000522987 THAP7Q9BT49 309 aaPredicted RBP11.71□□□□□ -0.53
MRPS28-209ENST00000522987 AKIP1Q9NQ31 210 aa11.71□□□□□ -0.53
MRPS28-209ENST00000522987 RAB22AQ9UL26 194 aa11.71□□□□□ -0.53
MRPS28-209ENST00000522987 TPRKBQ9Y3C4 175 aa11.71□□□□□ -0.53
MRPS28-209ENST00000522987 TRBV6-7A0A0A0MS04 114 aa11.7□□□□□ -0.54
MRPS28-209ENST00000522987 SHISA3A0PJX4 238 aa11.7□□□□□ -0.54
MRPS28-209ENST00000522987 BMPR1BO00238 502 aa11.7□□□□□ -0.54
MRPS28-209ENST00000522987 HLA-AP01891 365 aaKnown RBP11.7□□□□□ -0.54
MRPS28-209ENST00000522987 OR9G9P0C7N8 305 aa11.7□□□□□ -0.54
MRPS28-209ENST00000522987 CD81P60033 236 aa11.7□□□□□ -0.54
MRPS28-209ENST00000522987 ZNF45Q02386 682 aa11.7□□□□□ -0.54
MRPS28-209ENST00000522987 ARFRP1Q13795 201 aa11.7□□□□□ -0.54
MRPS28-209ENST00000522987 PRSS8Q16651 343 aa11.7□□□□□ -0.54
MRPS28-209ENST00000522987 VMA21Q3ZAQ7 101 aa11.7□□□□□ -0.54
MRPS28-209ENST00000522987 OR10R2Q8NGX6 335 aa11.7□□□□□ -0.54
MRPS28-209ENST00000522987 DCUN1D5Q9BTE7 237 aa11.7□□□□□ -0.54
MRPS28-209ENST00000522987 S4R3C0 116 aa11.7□□□□□ -0.54
MRPS28-209ENST00000522987 PPP5D1E7EU14 171 aa11.69□□□□□ -0.54
MRPS28-209ENST00000522987 MFNGO00587 321 aa11.69□□□□□ -0.54
MRPS28-209ENST00000522987 IGHV3-23P01764 117 aa11.69□□□□□ -0.54
MRPS28-209ENST00000522987 IFNA6P05013 189 aa11.69□□□□□ -0.54
MRPS28-209ENST00000522987 CD7P09564 240 aa11.69□□□□□ -0.54
MRPS28-209ENST00000522987 SAA1P0DJI8 122 aaPredicted RBP11.69□□□□□ -0.54
MRPS28-209ENST00000522987 DUTP33316 252 aaKnown RBP11.69□□□□□ -0.54
MRPS28-209ENST00000522987 MLLT11Q13015 90 aaPredicted RBP11.69□□□□□ -0.54
MRPS28-209ENST00000522987 TRAM1Q15629 374 aa11.69□□□□□ -0.54
MRPS28-209ENST00000522987 TATDN3Q17R31 274 aa11.69□□□□□ -0.54
MRPS28-209ENST00000522987 CD300EQ496F6 205 aaPredicted RBP11.69□□□□□ -0.54
MRPS28-209ENST00000522987 VKORC1L1Q8N0U8 176 aa11.69□□□□□ -0.54
MRPS28-209ENST00000522987 Q8N402 240 aa11.69□□□□□ -0.54
MRPS28-209ENST00000522987 DEFB125Q8N687 156 aa11.69□□□□□ -0.54
MRPS28-209ENST00000522987 NRG4Q8WWG1 115 aa11.69□□□□□ -0.54
MRPS28-209ENST00000522987 SNAPC3Q92966 411 aa11.69□□□□□ -0.54
MRPS28-209ENST00000522987 USMG5Q96IX5 58 aa11.69□□□□□ -0.54
MRPS28-209ENST00000522987 MGLLQ99685 303 aa11.69□□□□□ -0.54
MRPS28-209ENST00000522987 ZNF430Q9H8G1 570 aaPredicted RBP11.69□□□□□ -0.54
MRPS28-209ENST00000522987 HYDINQ4G0P3 5121 aa11.68□□□□□ -0.54
MRPS28-209ENST00000522987 HMX3A6NHT5 357 aa11.68□□□□□ -0.54
MRPS28-209ENST00000522987 OR2J3O76001 311 aa11.68□□□□□ -0.54
MRPS28-209ENST00000522987 HIST1H1DP16402 221 aaKnown RBP11.68□□□□□ -0.54
MRPS28-209ENST00000522987 GADD45AP24522 165 aa11.68□□□□□ -0.54
MRPS28-209ENST00000522987 TALDO1P37837 337 aa11.68□□□□□ -0.54
MRPS28-209ENST00000522987 UBE2KP61086 200 aa11.68□□□□□ -0.54
MRPS28-209ENST00000522987 ATP5G2Q06055 141 aa11.68□□□□□ -0.54
MRPS28-209ENST00000522987 GUCA2BQ16661 112 aa11.68□□□□□ -0.54
MRPS28-209ENST00000522987 H1FOOQ8IZA3 346 aaPredicted RBP11.68□□□□□ -0.54
MRPS28-209ENST00000522987 DYNLRB2Q8TF09 96 aa11.68□□□□□ -0.54
MRPS28-209ENST00000522987 DDB2Q92466 427 aa11.68□□□□□ -0.54
MRPS28-209ENST00000522987 TMEM68Q96MH6 324 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms