RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 SPATA3Q8NHX4 192 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 PIFOQ8TCI5 191 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 CAPSLQ8WWF8 208 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 SSX3Q99909 188 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 NAA60Q9H7X0 242 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 SLC35D1Q9NTN3 355 aa9.56□□□□□ -0.88
PVT1-215ENST00000522963 TEX13DA0A0J9YY54 714 aaPredicted RBP9.55□□□□□ -0.88
PVT1-215ENST00000522963 H3BUX3 64 aa9.55□□□□□ -0.88
PVT1-215ENST00000522963 FCGR3BO75015 233 aa9.55□□□□□ -0.88
PVT1-215ENST00000522963 APOA2P02652 100 aa9.55□□□□□ -0.88
PVT1-215ENST00000522963 SNRNP70P08621 437 aaKnown RBP9.55□□□□□ -0.88
PVT1-215ENST00000522963 AKR1C4P17516 323 aa9.55□□□□□ -0.88
PVT1-215ENST00000522963 F2RP25116 425 aa9.55□□□□□ -0.88
PVT1-215ENST00000522963 BRS3P32247 399 aa9.55□□□□□ -0.88
PVT1-215ENST00000522963 DHODHQ02127 395 aa9.55□□□□□ -0.88
PVT1-215ENST00000522963 CATR1Q13166 79 aa9.55□□□□□ -0.88
PVT1-215ENST00000522963 AANATQ16613 207 aa9.55□□□□□ -0.88
PVT1-215ENST00000522963 PLET1Q6UQ28 207 aa9.55□□□□□ -0.88
PVT1-215ENST00000522963 TMEM86BQ8N661 226 aa9.55□□□□□ -0.88
PVT1-215ENST00000522963 TP53RKQ96S44 253 aa9.55□□□□□ -0.88
PVT1-215ENST00000522963 BEX1Q9HBH7 125 aa9.55□□□□□ -0.88
PVT1-215ENST00000522963 PRELID3BQ9Y3B1 194 aa9.55□□□□□ -0.88
PVT1-215ENST00000522963 WASHC3Q9Y3C0 194 aa9.55□□□□□ -0.88
PVT1-215ENST00000522963 POMT1Q9Y6A1 747 aa9.55□□□□□ -0.88
PVT1-215ENST00000522963 C3orf85A0A1B0GTC6 90 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 H7C2Y5 167 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 GPR137BO60478 399 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 RAMP3O60896 148 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 IGKV1D-33P01593 117 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 IGKV1-33P01594 117 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 IGKV1-16P04430 117 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 VSIG10L2P0DP72 767 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 MC5RP33032 325 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 KIR2DS2P43631 304 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 MECP2P51608 486 aaKnown RBP9.54□□□□□ -0.88
PVT1-215ENST00000522963 RAB25P57735 213 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 TAS2R31P59538 309 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 SUPT4H1P63272 117 aaKnown RBP9.54□□□□□ -0.88
PVT1-215ENST00000522963 TAGLNQ01995 201 aaKnown RBP9.54□□□□□ -0.88
PVT1-215ENST00000522963 PPP1R1AQ13522 171 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 EBI3Q14213 229 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 HNF4GQ14541 408 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 RTL8BQ17RB0 113 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 SP6Q3SY56 376 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 ZNF585BQ52M93 769 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 TMEM128Q5BJH2 165 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 CCBE1Q6UXH8 406 aaPredicted RBP9.54□□□□□ -0.88
PVT1-215ENST00000522963 THNSL2Q86YJ6 484 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 PDPNQ86YL7 162 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 SGPP2Q8IWX5 399 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 SPAG16Q8N0X2 631 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 EAF1Q96JC9 268 aaPredicted RBP9.54□□□□□ -0.88
PVT1-215ENST00000522963 RITA1Q96K30 269 aa9.54□□□□□ -0.88
PVT1-215ENST00000522963 LIN7CQ9NUP9 197 aaKnown RBP9.54□□□□□ -0.88
PVT1-215ENST00000522963 TMEM89A2RUT3 159 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 INMT-MINDY4F8WBC2 141 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 H0Y980 276 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 PEX14O75381 377 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 CRYZL1O95825 349 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 OR5AC1P0C628 307 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 OR4E1P0C645 316 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 FAM106CPP0CH98 169 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 HKR1P10072 659 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 RRASP10301 218 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 LPAR6P43657 344 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 HES1Q14469 280 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 OXA1LQ15070 435 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 Q8N6K4 173 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 TCTEX1D1Q8N7M0 179 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 C3orf56Q8N813 242 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 OR2T10Q8NGZ9 312 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 OR4S2Q8NH73 311 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 OR5R1Q8NH85 324 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 GALNT14Q96FL9 552 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 MARVELD1Q9BSK0 173 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 ALX4Q9H161 411 aaPredicted RBP9.53□□□□□ -0.88
PVT1-215ENST00000522963 PRR13Q9NZ81 148 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 VPREB3Q9UKI3 123 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 STAB1Q9NY15 2570 aa9.53□□□□□ -0.88
PVT1-215ENST00000522963 C9orf170A2RU37 121 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 A6NDX4 124 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 SRRM4A7MD48 611 aaKnown RBP9.52□□□□□ -0.89
PVT1-215ENST00000522963 RBFOX2O43251 390 aaKnown RBP eCLIP9.52□□□□□ -0.891e-6■■■■□ 26.2
PVT1-215ENST00000522963 S1PR2O95136 353 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 SFT2D2O95562 160 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 MOSP00540 346 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 IGKV1-39P01597 117 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 IGKV1D-39P04432 117 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 TMEM11P17152 192 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 VAMP1P23763 118 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 UCP1P25874 307 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 CNTFRP26992 372 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 UBE2MP61081 183 aaKnown RBP9.52□□□□□ -0.89
PVT1-215ENST00000522963 RPS16P62249 146 aaKnown RBP9.52□□□□□ -0.89
PVT1-215ENST00000522963 FOXL1Q12952 345 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 CBX3Q13185 183 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 TMEM187Q14656 261 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 TMEM177Q53S58 311 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 AWAT1Q58HT5 328 aa9.52□□□□□ -0.89
PVT1-215ENST00000522963 DHRS7BQ6IAN0 325 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms