RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 PLEKHA2Q9HB19 425 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 LPAR2Q9HBW0 351 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 MMP26Q9NRE1 261 aa12.57□□□□□ -0.4
CTNNA1-236ENST00000522792 IGHV4-61A0A0C4DH41 118 aa12.56□□□□□ -0.4
CTNNA1-236ENST00000522792 A0A0D9SG52 128 aa12.56□□□□□ -0.4
CTNNA1-236ENST00000522792 M0R1W7 72 aa12.56□□□□□ -0.4
CTNNA1-236ENST00000522792 RBFOX2O43251 390 aaKnown RBP eCLIP12.56□□□□□ -0.4
CTNNA1-236ENST00000522792 ENSAO43768 121 aaKnown RBP12.56□□□□□ -0.4
CTNNA1-236ENST00000522792 P0C879 139 aa12.56□□□□□ -0.4
CTNNA1-236ENST00000522792 NUP62P37198 522 aaPredicted RBP12.56□□□□□ -0.4
CTNNA1-236ENST00000522792 PRRX1P54821 245 aa12.56□□□□□ -0.4
CTNNA1-236ENST00000522792 ID3Q02535 119 aa12.56□□□□□ -0.4
CTNNA1-236ENST00000522792 KLRD1Q13241 179 aa12.56□□□□□ -0.4
CTNNA1-236ENST00000522792 ZNF345Q14585 488 aa12.56□□□□□ -0.4
CTNNA1-236ENST00000522792 H2BFWTQ7Z2G1 175 aa12.56□□□□□ -0.4
CTNNA1-236ENST00000522792 DMBX1Q8NFW5 382 aa12.56□□□□□ -0.4
CTNNA1-236ENST00000522792 ST6GALNAC6Q969X2 333 aa12.56□□□□□ -0.4
CTNNA1-236ENST00000522792 TMEM186Q96B77 213 aa12.56□□□□□ -0.4
CTNNA1-236ENST00000522792 SLC35D1Q9NTN3 355 aa12.56□□□□□ -0.4
CTNNA1-236ENST00000522792 ZFP57Q9NU63 452 aa12.56□□□□□ -0.4
CTNNA1-236ENST00000522792 NDUFS8O00217 210 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 SNAPC5O75971 98 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 IGLV1-47P01700 117 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 C4BPBP20851 252 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 HLA-DRB5Q30154 266 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 PDZD9Q8IXQ8 264 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 OR8H1Q8NGG4 311 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 ZC4H2Q9NQZ6 224 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 NSG2Q9Y328 171 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 A8MXK9 166 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 VWC2LB2RUY7 222 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 FAM157AC9JC47 383 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 E5RGE8 158 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 RGS13O14921 159 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 HKR1P10072 659 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 IL3RAP26951 378 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 MIDNQ504T8 468 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 TGIF2LXQ8IUE1 241 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 TNFRSF14Q92956 283 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 GSX2Q9BZM3 304 aa12.55□□□□□ -0.4
CTNNA1-236ENST00000522792 IGHV2-70DA0A0C4DH43 119 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 H7C2Y5 167 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 WRBO00258 174 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 IGKV1-16P04430 117 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 NQO2P16083 231 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 RPL12P30050 165 aaKnown RBP12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 ZNF137PP52743 207 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 ERVK-16P61578 105 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 PAX2Q02962 417 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 RTL8BQ17RB0 113 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 CLEC9AQ6UXN8 241 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 VMO1Q7Z5L0 202 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 OR13D1Q8NGV5 346 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 AQP10Q96PS8 301 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 NABP2Q9BQ15 211 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 KANTRA0A1W2PQU2 76 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 A0A1W2PRD5 423 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 A0A1W2PRF3 423 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 A0A1W2PRM7 423 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 H0YJW9 148 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 BUB1B-PAK6H3BSN5 160 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 CHST1O43916 411 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 RBMXL2O75526 392 aaKnown RBP12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 ARG1P05089 322 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 OR9G9P0C7N8 305 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 OR2B8PP59922 312 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 FAM71F2Q6NXP2 309 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 BEND2Q8NDZ0 799 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 OR4P4Q8NGL7 312 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 C11orf1Q9H5F2 150 aa12.54□□□□□ -0.4
CTNNA1-236ENST00000522792 USP9YO00507 2555 aaPredicted RBP12.53□□□□□ -0.4
CTNNA1-236ENST00000522792 BCL2L11O43521 198 aa12.53□□□□□ -0.4
CTNNA1-236ENST00000522792 FOXH1O75593 365 aa12.53□□□□□ -0.4
CTNNA1-236ENST00000522792 CFDP00746 253 aaPredicted RBP12.53□□□□□ -0.4
CTNNA1-236ENST00000522792 APOA2P02652 100 aa12.53□□□□□ -0.4
CTNNA1-236ENST00000522792 PAX1P15863 534 aa12.53□□□□□ -0.4
CTNNA1-236ENST00000522792 PRTN3P24158 256 aa12.53□□□□□ -0.4
CTNNA1-236ENST00000522792 VAMP2P63027 116 aa12.53□□□□□ -0.4
CTNNA1-236ENST00000522792 KIR3DL3Q8N743 410 aa12.53□□□□□ -0.4
CTNNA1-236ENST00000522792 PSMG3-AS1Q96PY0 264 aa12.53□□□□□ -0.4
CTNNA1-236ENST00000522792 PCGF1Q9BSM1 259 aa12.53□□□□□ -0.4
CTNNA1-236ENST00000522792 TMEM140Q9NV12 185 aa12.53□□□□□ -0.4
CTNNA1-236ENST00000522792 ASH1LQ9NR48 2969 aaKnown RBP12.53□□□□□ -0.4
CTNNA1-236ENST00000522792 TMEM50AO95807 157 aa12.52□□□□□ -0.4
CTNNA1-236ENST00000522792 IAPPP10997 89 aa12.52□□□□□ -0.4
CTNNA1-236ENST00000522792 PVALBP20472 110 aaPredicted RBP12.52□□□□□ -0.4
CTNNA1-236ENST00000522792 P2RY1P47900 373 aa12.52□□□□□ -0.4
CTNNA1-236ENST00000522792 CAV2P51636 162 aa12.52□□□□□ -0.4
CTNNA1-236ENST00000522792 HCP5Q6MZN7 132 aa12.52□□□□□ -0.4
CTNNA1-236ENST00000522792 OR5AN1Q8NGI8 311 aa12.52□□□□□ -0.4
CTNNA1-236ENST00000522792 ARPC5LQ9BPX5 153 aa12.52□□□□□ -0.4
CTNNA1-236ENST00000522792 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.52□□□□□ -0.4
CTNNA1-236ENST00000522792 COA4Q9NYJ1 87 aa12.52□□□□□ -0.4
CTNNA1-236ENST00000522792 KPTNQ9Y664 436 aa12.52□□□□□ -0.4
CTNNA1-236ENST00000522792 IGHV3-72A0A0B4J1Y9 119 aa12.52□□□□□ -0.41
CTNNA1-236ENST00000522792 TRAV3A0A0B4J244 114 aa12.52□□□□□ -0.41
CTNNA1-236ENST00000522792 FAM24AA6NFZ4 105 aa12.52□□□□□ -0.41
CTNNA1-236ENST00000522792 SPDEFO95238 335 aa12.52□□□□□ -0.41
CTNNA1-236ENST00000522792 TAGLNQ01995 201 aaKnown RBP12.52□□□□□ -0.41
CTNNA1-236ENST00000522792 CLEC12BQ2HXU8 276 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms