RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 CPEP16870 476 aa6.34□□□□□ -1.39
TRAPPC9-212ENST00000521944 MPV17LQ2QL34 196 aa6.34□□□□□ -1.39
TRAPPC9-212ENST00000521944 NXNL2Q5VZ03 156 aa6.34□□□□□ -1.39
TRAPPC9-212ENST00000521944 SERPINA12Q8IW75 414 aa6.34□□□□□ -1.39
TRAPPC9-212ENST00000521944 NECAP1Q8NC96 275 aa6.34□□□□□ -1.39
TRAPPC9-212ENST00000521944 OR2AK2Q8NG84 335 aa6.34□□□□□ -1.39
TRAPPC9-212ENST00000521944 ATP6V1G3Q96LB4 118 aa6.34□□□□□ -1.39
TRAPPC9-212ENST00000521944 KRTAP9-3Q9BYQ3 159 aa6.34□□□□□ -1.39
TRAPPC9-212ENST00000521944 PIPOXQ9P0Z9 390 aa6.34□□□□□ -1.39
TRAPPC9-212ENST00000521944 MDFICQ9P1T7 246 aa6.34□□□□□ -1.39
TRAPPC9-212ENST00000521944 GNG8Q9UK08 70 aa6.34□□□□□ -1.39
TRAPPC9-212ENST00000521944 S4R3C0 116 aa6.34□□□□□ -1.39
TRAPPC9-212ENST00000521944 TUSC2O75896 110 aa6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 T-ENOLP0DO92 83 aa6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 MED21Q13503 144 aa6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 PTGES3Q15185 160 aaKnown RBP6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 C6orf141Q5SZD1 244 aa6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 SIGIRRQ6IA17 410 aa6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 CLEC19AQ6UXS0 136 aa6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 STX19Q8N4C7 294 aa6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 OR10H4Q8NGA5 316 aa6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 OR5D14Q8NGL3 314 aa6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 MRPL30Q8TCC3 161 aaKnown RBP6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 CHAC2Q8WUX2 184 aa6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 FAM192AQ9GZU8 254 aa6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 MAGIXQ9H6Y5 334 aa6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 RAB9BQ9NP90 201 aa6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 ENOPH1Q9UHY7 261 aa6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 EXOSC1Q9Y3B2 195 aaKnown RBP6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 GMPPBQ9Y5P6 360 aa6.33□□□□□ -1.4
TRAPPC9-212ENST00000521944 MCRIP1C9JLW8 97 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 SERPINA2P20848 420 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 ARL3P36405 182 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 CCR9P51686 369 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 TMEM187Q14656 261 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 MED22Q15528 200 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 FAM106AQ4KMX7 169 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 SLC25A30Q5SVS4 291 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 RAB12Q6IQ22 244 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 TRAT1Q6PIZ9 186 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 ZNF554Q86TJ5 538 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 TTC9CQ8N5M4 171 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 TMEM163Q8TC26 289 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 ZNF503Q96F45 646 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 PELI1Q96FA3 418 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 IL4I1Q96RQ9 567 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 GPER1Q99527 375 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 METTL9Q9H1A3 318 aa6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 MRPL27Q9P0M9 148 aaKnown RBP6.32□□□□□ -1.4
TRAPPC9-212ENST00000521944 UBE2QL1A1L167 161 aa6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 CA1P00915 261 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 IFNA21P01568 189 aa6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 IFNA17P01571 189 aa6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 HMGN3Q15651 99 aa6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 PRSS8Q16651 343 aa6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 RNF212Q495C1 297 aa6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 FAM209BQ5JX69 171 aa6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 LCE5AQ5TCM9 118 aa6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 OR4A47Q6IF82 309 aa6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 PDPNQ86YL7 162 aa6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 OR13C5Q8NGS8 318 aa6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 SRSF12Q8WXF0 261 aaKnown RBP6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 MARC2Q969Z3 335 aa6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 GALMQ96C23 342 aa6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 NSL1Q96IY1 281 aa6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 PHB2Q99623 299 aa6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 ELAC2Q9BQ52 826 aaKnown RBP6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 C11orf54Q9H0W9 315 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 ISG20L2Q9H9L3 353 aaKnown RBP6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 PEX16Q9Y5Y5 336 aa6.31□□□□□ -1.4
TRAPPC9-212ENST00000521944 IGHV3-35A0A0C4DH35 117 aa6.3□□□□□ -1.4
TRAPPC9-212ENST00000521944 C15orf61A6NNL5 157 aa6.3□□□□□ -1.4
TRAPPC9-212ENST00000521944 ZNF705EA8MWA4 302 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC9-212ENST00000521944 CA11O75493 328 aa6.3□□□□□ -1.4
TRAPPC9-212ENST00000521944 BAG2O95816 211 aa6.3□□□□□ -1.4
TRAPPC9-212ENST00000521944 RAB3AP20336 220 aa6.3□□□□□ -1.4
TRAPPC9-212ENST00000521944 GALP22466 123 aa6.3□□□□□ -1.4
TRAPPC9-212ENST00000521944 MS4A2Q01362 244 aa6.3□□□□□ -1.4
TRAPPC9-212ENST00000521944 SLC22A6Q4U2R8 563 aa6.3□□□□□ -1.4
TRAPPC9-212ENST00000521944 C10orf55Q5SWW7 151 aa6.3□□□□□ -1.4
TRAPPC9-212ENST00000521944 IDO2Q6ZQW0 420 aa6.3□□□□□ -1.4
TRAPPC9-212ENST00000521944 UBE2DNLQ8IWF7 75 aa6.3□□□□□ -1.4
TRAPPC9-212ENST00000521944 C6orf223Q8N319 242 aa6.3□□□□□ -1.4
TRAPPC9-212ENST00000521944 TEX12Q9BXU0 123 aa6.3□□□□□ -1.4
TRAPPC9-212ENST00000521944 TAS2R4Q9NYW5 299 aa6.3□□□□□ -1.4
TRAPPC9-212ENST00000521944 KCNIP1Q9NZI2 227 aa6.3□□□□□ -1.4
TRAPPC9-212ENST00000521944 WARS2Q9UGM6 360 aaKnown RBP6.3□□□□□ -1.4
TRAPPC9-212ENST00000521944 A0A1B0GW64 132 aa6.29□□□□□ -1.4
TRAPPC9-212ENST00000521944 E7EUB6 86 aa6.29□□□□□ -1.4
TRAPPC9-212ENST00000521944 J3QRE1 110 aa6.29□□□□□ -1.4
TRAPPC9-212ENST00000521944 ITGB1BP1O14713 200 aa6.29□□□□□ -1.4
TRAPPC9-212ENST00000521944 GPX5O75715 221 aa6.29□□□□□ -1.4
TRAPPC9-212ENST00000521944 CST1P01037 141 aa6.29□□□□□ -1.4
TRAPPC9-212ENST00000521944 CLEC3BP05452 202 aa6.29□□□□□ -1.4
TRAPPC9-212ENST00000521944 GTF2F2P13984 249 aa6.29□□□□□ -1.4
TRAPPC9-212ENST00000521944 MAP2K4P45985 399 aa6.29□□□□□ -1.4
TRAPPC9-212ENST00000521944 SOX2P48431 317 aa6.29□□□□□ -1.4
TRAPPC9-212ENST00000521944 ELLP55199 621 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC9-212ENST00000521944 KLK9Q2XQG4 91 aa6.29□□□□□ -1.4
TRAPPC9-212ENST00000521944 SERTAD4-AS1Q5TG53 156 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms