RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 PMCHL2Q9BQD1 86 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 TMEM238LA0A1B0GVL6 79 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 LOC390937A0A1W2PQ73 354 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 A6NJY4 79 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 BTF3P20290 206 aaKnown RBP13.89□□□□□ -0.19
USP42-207ENST00000521713 LYZP61626 148 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 Q8WTZ3 238 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 RAXQ9Y2V3 346 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 CSN3P07498 182 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 APOBEC3AP31941 199 aaPredicted RBP13.88□□□□□ -0.19
USP42-207ENST00000521713 RPL7P18124 248 aaKnown RBP13.88□□□□□ -0.19
USP42-207ENST00000521713 KCNMB1Q16558 191 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 TMEM30BQ3MIR4 351 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 LINC01590Q5TEZ4 76 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 ZNF788Q6ZQV5 615 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 ZNF826PQ6ZT77 177 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 MRGPRFQ96AM1 343 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 OR4C12Q96R67 309 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 SDHCQ99643 169 aaPredicted RBP13.88□□□□□ -0.19
USP42-207ENST00000521713 SNAI3Q3KNW1 292 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 LAIR2Q6ISS4 152 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 TEPPQ6URK8 271 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 UNQ9370/PRO34162Q6UXP9 181 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 DOCK6Q96HP0 2047 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 TRBV23-1A0A0A0MS06 115 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 HPRT1P00492 218 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 TRGC1P0CF51 173 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 ORM2P19652 201 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 SLC25A53Q5H9E4 307 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 ERASQ7Z444 233 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 TUBA4BQ9H853 241 aa13.88□□□□□ -0.19
USP42-207ENST00000521713 ZFC3H1O60293 1989 aaKnown RBP13.88□□□□□ -0.19
USP42-207ENST00000521713 FAM106CPP0CH98 169 aa13.87□□□□□ -0.19
USP42-207ENST00000521713 HINT1P49773 126 aaPredicted RBP13.87□□□□□ -0.19
USP42-207ENST00000521713 GFRA1P56159 465 aa13.87□□□□□ -0.19
USP42-207ENST00000521713 SLC25A34Q6PIV7 304 aa13.87□□□□□ -0.19
USP42-207ENST00000521713 TPRX1Q8N7U7 411 aa13.87□□□□□ -0.19
USP42-207ENST00000521713 PTPRFP10586 1907 aa13.87□□□□□ -0.19
USP42-207ENST00000521713 ODAMA1E959 279 aa13.87□□□□□ -0.19
USP42-207ENST00000521713 G6PCP35575 357 aa13.87□□□□□ -0.19
USP42-207ENST00000521713 LINC01560Q8TB33 94 aa13.87□□□□□ -0.19
USP42-207ENST00000521713 LOC102724200A0A096LPH7 203 aaPredicted RBP13.86□□□□□ -0.19
USP42-207ENST00000521713 TRBV5-7A0A0A0MS05 114 aa13.86□□□□□ -0.19
USP42-207ENST00000521713 TGIF2-C20orf24A0A0A6YYL0 155 aa13.86□□□□□ -0.19
USP42-207ENST00000521713 H0Y980 276 aa13.86□□□□□ -0.19
USP42-207ENST00000521713 HDHD3Q9BSH5 251 aaPredicted RBP13.86□□□□□ -0.19
USP42-207ENST00000521713 IGHV1-69-2A0A0G2JMI3 117 aa13.86□□□□□ -0.19
USP42-207ENST00000521713 CD74P04233 296 aa13.86□□□□□ -0.19
USP42-207ENST00000521713 ACSF3Q4G176 576 aaPredicted RBP13.86□□□□□ -0.19
USP42-207ENST00000521713 SPACA3Q8IXA5 215 aa13.86□□□□□ -0.19
USP42-207ENST00000521713 AQP3Q92482 292 aa13.86□□□□□ -0.19
USP42-207ENST00000521713 TMEM208Q9BTX3 173 aa13.86□□□□□ -0.19
USP42-207ENST00000521713 C17orf51A8MQB3 221 aa13.86□□□□□ -0.19
USP42-207ENST00000521713 A8MWL6 223 aa13.86□□□□□ -0.19
USP42-207ENST00000521713 J3QR06 171 aa13.86□□□□□ -0.19
USP42-207ENST00000521713 NPY1RP25929 384 aa13.86□□□□□ -0.19
USP42-207ENST00000521713 P2RY4P51582 365 aa13.86□□□□□ -0.19
USP42-207ENST00000521713 SRSF9Q13242 221 aaKnown RBP eCLIP13.86□□□□□ -0.19
USP42-207ENST00000521713 A0A1B0GV72 72 aa13.85□□□□□ -0.19
USP42-207ENST00000521713 PTGDSP41222 190 aa13.85□□□□□ -0.19
USP42-207ENST00000521713 LAMTOR1Q6IAA8 161 aa13.85□□□□□ -0.19
USP42-207ENST00000521713 TMEM222Q9H0R3 208 aa13.85□□□□□ -0.19
USP42-207ENST00000521713 GPR179Q6PRD1 2367 aa13.85□□□□□ -0.19
USP42-207ENST00000521713 FOXH1O75593 365 aa13.85□□□□□ -0.19
USP42-207ENST00000521713 REG1BP48304 166 aa13.85□□□□□ -0.19
USP42-207ENST00000521713 RND3P61587 244 aa13.85□□□□□ -0.19
USP42-207ENST00000521713 RPS11P62280 158 aaKnown RBP eCLIP13.85□□□□□ -0.19
USP42-207ENST00000521713 FAM27E3Q08E93 113 aa13.85□□□□□ -0.19
USP42-207ENST00000521713 CBLN4Q9NTU7 201 aa13.85□□□□□ -0.19
USP42-207ENST00000521713 H0YL77 283 aa13.85□□□□□ -0.19
USP42-207ENST00000521713 THSD7BQ9C0I4 1608 aa13.85□□□□□ -0.19
USP42-207ENST00000521713 FAM90A26D6RGX4 464 aa13.85□□□□□ -0.19
USP42-207ENST00000521713 KLF7O75840 302 aaPredicted RBP13.85□□□□□ -0.19
USP42-207ENST00000521713 TBX6O95947 436 aaPredicted RBP13.85□□□□□ -0.19
USP42-207ENST00000521713 MYOZ3Q8TDC0 251 aa13.85□□□□□ -0.19
USP42-207ENST00000521713 DLL3Q9NYJ7 618 aa13.85□□□□□ -0.19
USP42-207ENST00000521713 A0A1W2PPE3 182 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 MFAP2P55001 183 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 G6PC2Q9NQR9 355 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 PPIAL4CA0A0B4J2A2 164 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 PPIAL4GP0DN37 164 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 HIST1H1BP16401 226 aaKnown RBP13.84□□□□□ -0.19
USP42-207ENST00000521713 SLC35B1P78383 322 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 LRRC75AQ8NAA5 344 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 OR1B1Q8NGR6 318 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 KLF4O43474 513 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 CD40P25942 277 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 RPL27AP46776 148 aaKnown RBP13.84□□□□□ -0.19
USP42-207ENST00000521713 ECSCRQ19T08 205 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 WDYHV1Q96HA8 205 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 CCL19Q99731 98 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 CALYQ9NYX4 217 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 PSG2P11465 335 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 FOLR2P14207 255 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 KLK2P20151 261 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 IDI2-AS1Q9NZ38 188 aa13.84□□□□□ -0.19
USP42-207ENST00000521713 A0A0G2JMM0 328 aa13.83□□□□□ -0.19
USP42-207ENST00000521713 A0A1W2PPB8 328 aa13.83□□□□□ -0.19
USP42-207ENST00000521713 A0A1W2PRS3 328 aa13.83□□□□□ -0.19
USP42-207ENST00000521713 KIR3DP1A8MWS1 328 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms