RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 IFT22Q9H7X7 185 aa9.46□□□□□ -0.9
CLK4-206ENST00000520878 UNKLQ9H9P5 680 aaKnown RBP9.46□□□□□ -0.9
CLK4-206ENST00000520878 ZNRD1Q9P1U0 126 aa9.46□□□□□ -0.9
CLK4-206ENST00000520878 C7orf77A4D0Y5 90 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 K7N7A8 449 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 NDUFB3O43676 98 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 PAX9P55771 341 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 FFAR4Q5NUL3 377 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 ABHD12Q8N2K0 398 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 FAM24BQ8N5W8 94 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 TRAV38-1A0A0B4J264 116 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 hADV38S2A0JD32 116 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 LYNX1G3V0Z9 82 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 SLC31A2O15432 143 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 LYNX1P0DP58 116 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 MRGPRGQ86SM5 289 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 RPUSD4Q96CM3 377 aaKnown RBP9.45□□□□□ -0.9
CLK4-206ENST00000520878 WFIKKN1Q96NZ8 548 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 CIB3Q96Q77 187 aaPredicted RBP9.45□□□□□ -0.9
CLK4-206ENST00000520878 VSIRQ9H7M9 311 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 PPIAL4EA0A075B759 164 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 MAP1LC3B2A6NCE7 125 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 PPIAL4DF5H284 164 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.45□□□□□ -0.9
CLK4-206ENST00000520878 IFNA1P01562 189 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 PPIAL4FP0DN26 164 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 CCL3L1P16619 93 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 LMO1P25800 156 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 UBE2G2P60604 165 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 IGF2-ASQ6U949 168 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 CA5BP1Q8WTZ4 195 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 PINX1Q96BK5 328 aaKnown RBP9.45□□□□□ -0.9
CLK4-206ENST00000520878 MAP1LC3BQ9GZQ8 125 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 IL19Q9UHD0 177 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 PPIAL4AQ9Y536 164 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 TNCP24821 2201 aa9.45□□□□□ -0.9
CLK4-206ENST00000520878 CD3EP07766 207 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 DEFA4P12838 97 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 MMP9P14780 707 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 NQO2P16083 231 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 RPS10P46783 165 aaKnown RBP9.44□□□□□ -0.9
CLK4-206ENST00000520878 CLEC12BQ2HXU8 276 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 SMUG1Q53HV7 270 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 ZNF66Q6ZN08 573 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 CYB561D1Q8N8Q1 229 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 A0A1W2PPE2 198 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 CEACAM8P31997 349 aaPredicted RBP9.44□□□□□ -0.9
CLK4-206ENST00000520878 COMMD1Q8N668 190 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 HES4Q9HCC6 221 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 C1orf196B1AJZ1 125 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 ZNF737O75373 536 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 ACTL6BO94805 426 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 RPP30P78346 268 aaKnown RBP9.44□□□□□ -0.9
CLK4-206ENST00000520878 LRRC10Q5BKY1 277 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 AVPI1Q5T686 147 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 ZNF429Q86V71 674 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 TAF15Q92804 592 aaKnown RBP eCLIP9.44□□□□□ -0.9
CLK4-206ENST00000520878 SLC35D1Q9NTN3 355 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 JPT1Q9UK76 154 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 RNF115Q9Y4L5 304 aa9.44□□□□□ -0.9
CLK4-206ENST00000520878 C17orf100A8MU93 164 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 HPRT1P00492 218 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 RAB7AP51149 207 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 RAB5BP61020 215 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 OR10G4Q8NGN3 311 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 OR10G9Q8NGN4 311 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 OR10G7Q8NGN6 311 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 OR4S2Q8NH73 311 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 PRR7Q8TB68 274 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 SSMEM1Q8WWF3 244 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 PATZ1Q9HBE1 687 aaKnown RBP9.43□□□□□ -0.9
CLK4-206ENST00000520878 CISD1Q9NZ45 108 aaKnown RBP9.43□□□□□ -0.9
CLK4-206ENST00000520878 IGHV3-72A0A0B4J1Y9 119 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 OR2C1O95371 312 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 IGLV2-14P01704 120 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 APELAP0DMC3 54 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 SLC25A6P12236 298 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 KIAA0141Q14154 515 aaPredicted RBP9.43□□□□□ -0.9
CLK4-206ENST00000520878 TMEM140Q9NV12 185 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 A0A1W2PPH5 198 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 ZNF727A8MUV8 499 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 RAB29O14966 203 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 OR9G9P0C7N8 305 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 DUTP33316 252 aaKnown RBP9.43□□□□□ -0.9
CLK4-206ENST00000520878 TMPRSS3P57727 454 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 RHEBQ15382 184 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 ADIRFQ15847 76 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 HFEQ30201 348 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 ZNF525Q8N782 197 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 OR4F5Q8NH21 305 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 OR4F4Q96R69 305 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 TMEM147Q9BVK8 224 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 TMPRSS5Q9H3S3 457 aa9.43□□□□□ -0.9
CLK4-206ENST00000520878 CHD3Q12873 2000 aaKnown RBP9.42□□□□□ -0.9
CLK4-206ENST00000520878 TRAV3A0A0B4J244 114 aa9.42□□□□□ -0.9
CLK4-206ENST00000520878 NPIPB11E5RHQ5 1161 aa9.42□□□□□ -0.9
CLK4-206ENST00000520878 C17orf112F2Z3M2 114 aa9.42□□□□□ -0.9
CLK4-206ENST00000520878 RTL8BQ17RB0 113 aa9.42□□□□□ -0.9
CLK4-206ENST00000520878 ZNF561Q8N587 486 aa9.42□□□□□ -0.9
CLK4-206ENST00000520878 KBTBD11-OT1A0A1B0GTJ5 212 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms