RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 TMEM86BQ8N661 226 aa11.37□□□□□ -0.59
SDC2-203ENST00000519587 DUSP18Q8NEJ0 188 aa11.37□□□□□ -0.59
SDC2-203ENST00000519587 OR4C13Q8NGP0 309 aa11.37□□□□□ -0.59
SDC2-203ENST00000519587 ZFAND2BQ8WV99 257 aa11.37□□□□□ -0.59
SDC2-203ENST00000519587 DDB2Q92466 427 aa11.37□□□□□ -0.59
SDC2-203ENST00000519587 RTBDNQ9BSG5 229 aaPredicted RBP11.37□□□□□ -0.59
SDC2-203ENST00000519587 KCNIP3Q9Y2W7 256 aa11.37□□□□□ -0.59
SDC2-203ENST00000519587 SOX21Q9Y651 276 aaPredicted RBP11.37□□□□□ -0.59
SDC2-203ENST00000519587 ATRQ13535 2644 aa11.37□□□□□ -0.59
SDC2-203ENST00000519587 TRAV6A0A075B6T7 132 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 C3orf85A0A1B0GTC6 90 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 PEX14O75381 377 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 MOSP00540 346 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 IGKV1D-33P01593 117 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 IGKV1-33P01594 117 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 SERPINE2P07093 398 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 TMEM11P17152 192 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 VAMP1P23763 118 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 PAX6P26367 422 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 IER3P46695 156 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 RPL30P62888 115 aaKnown RBP11.36□□□□□ -0.59
SDC2-203ENST00000519587 SRPXP78539 464 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 TUSC1Q2TAM9 212 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 SLC25A42Q86VD7 318 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 SPAG16Q8N0X2 631 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 OR8H1Q8NGG4 311 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 OSR1Q8TAX0 266 aaPredicted RBP11.36□□□□□ -0.59
SDC2-203ENST00000519587 FLYWCH2Q96CP2 140 aaKnown RBP11.36□□□□□ -0.59
SDC2-203ENST00000519587 ZNF48Q96MX3 618 aaPredicted RBP11.36□□□□□ -0.59
SDC2-203ENST00000519587 GPHA2Q96T91 129 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 TSNAXQ99598 290 aaKnown RBP11.36□□□□□ -0.59
SDC2-203ENST00000519587 RNF5Q99942 180 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 AIFM2Q9BRQ8 373 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 RAB18Q9NP72 206 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 COMMD9Q9P000 198 aa11.36□□□□□ -0.59
SDC2-203ENST00000519587 A0A0A6YYJ9 748 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 FAM90A9PA6NNJ1 464 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 ATG12O94817 140 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 CRYZL1O95825 349 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 IFNA2P01563 188 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 IGHV4-59P01825 116 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 RPA2P15927 270 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 RAG2P55895 527 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 DHODHQ02127 395 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 TRIM16LQ309B1 348 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 C4orf46Q504U0 113 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 C16orf82Q7Z2V1 217 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 MINDY2Q8NBR6 621 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 ADAD2Q8NCV1 583 aaKnown RBP11.35□□□□□ -0.59
SDC2-203ENST00000519587 HARBI1Q96MB7 349 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 PLEKHA2Q9HB19 425 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 VPREB3Q9UKI3 123 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 FLVCR2Q9UPI3 526 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 TCF19Q9Y242 345 aa11.35□□□□□ -0.59
SDC2-203ENST00000519587 SHOXO15266 292 aa11.34□□□□□ -0.59
SDC2-203ENST00000519587 HOXA3O43365 443 aaPredicted RBP11.34□□□□□ -0.59
SDC2-203ENST00000519587 PRAF2O60831 178 aa11.34□□□□□ -0.59
SDC2-203ENST00000519587 SPDEFO95238 335 aa11.34□□□□□ -0.59
SDC2-203ENST00000519587 DHFRP00374 187 aa11.34□□□□□ -0.59
SDC2-203ENST00000519587 HPRT1P00492 218 aa11.34□□□□□ -0.59
SDC2-203ENST00000519587 HRASP01112 189 aa11.34□□□□□ -0.59
SDC2-203ENST00000519587 HLA-AP01891 365 aaKnown RBP11.34□□□□□ -0.59
SDC2-203ENST00000519587 LGALS7P47929 136 aa11.34□□□□□ -0.59
SDC2-203ENST00000519587 ERVK-16P61578 105 aa11.34□□□□□ -0.59
SDC2-203ENST00000519587 RPS16P62249 146 aaKnown RBP11.34□□□□□ -0.59
SDC2-203ENST00000519587 EBI3Q14213 229 aa11.34□□□□□ -0.59
SDC2-203ENST00000519587 TMEM177Q53S58 311 aa11.34□□□□□ -0.59
SDC2-203ENST00000519587 TMEM230Q96A57 120 aa11.34□□□□□ -0.59
SDC2-203ENST00000519587 GALNT14Q96FL9 552 aa11.34□□□□□ -0.59
SDC2-203ENST00000519587 EAF1Q96JC9 268 aaPredicted RBP11.34□□□□□ -0.59
SDC2-203ENST00000519587 TMEM222Q9H0R3 208 aa11.34□□□□□ -0.59
SDC2-203ENST00000519587 ALX4Q9H161 411 aaPredicted RBP11.34□□□□□ -0.59
SDC2-203ENST00000519587 C1RLQ9NZP8 487 aa11.34□□□□□ -0.59
SDC2-203ENST00000519587 KIAA1456Q9P272 454 aa11.34□□□□□ -0.59
SDC2-203ENST00000519587 DNAJC9-AS1A6NH13 148 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 INMT-MINDY4F8WBC2 141 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 M0QZK8 103 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 OR2F2O95006 317 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 IGKV1-16P04430 117 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 OR5AC1P0C628 307 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 OR4E1P0C645 316 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 ANXA7P20073 488 aaKnown RBP11.33□□□□□ -0.6
SDC2-203ENST00000519587 CD24P25063 80 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 UCP1P25874 307 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 MECP2P51608 486 aaKnown RBP11.33□□□□□ -0.6
SDC2-203ENST00000519587 RAB25P57735 213 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 LINC00205P59089 165 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 HILS1P60008 231 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 PPP1R1AQ13522 171 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 MMDQ15546 238 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 LY6EQ16553 131 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 VMA21Q3ZAQ7 101 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 TP53RKQ96S44 253 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 MARVELD1Q9BSK0 173 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 SLC25A33Q9BSK2 321 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 GPN1Q9HCN4 374 aaPredicted RBP11.33□□□□□ -0.6
SDC2-203ENST00000519587 MOB4Q9Y3A3 225 aa11.33□□□□□ -0.6
SDC2-203ENST00000519587 A6NDX4 124 aa11.32□□□□□ -0.6
SDC2-203ENST00000519587 CLDN34H7C241 214 aa11.32□□□□□ -0.6
SDC2-203ENST00000519587 NBR2O15453 112 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms