RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 IGLV1-47P01700 117 aa12.28□□□□□ -0.44
TRAPPC9-205ENST00000518839 CT45A6P0DMU7 189 aa12.28□□□□□ -0.44
TRAPPC9-205ENST00000518839 CT45A5P0DMU8 189 aa12.28□□□□□ -0.44
TRAPPC9-205ENST00000518839 CT45A7P0DMV0 189 aa12.28□□□□□ -0.44
TRAPPC9-205ENST00000518839 PRTN3P24158 256 aa12.28□□□□□ -0.44
TRAPPC9-205ENST00000518839 LMO4P61968 165 aa12.28□□□□□ -0.44
TRAPPC9-205ENST00000518839 C1orf229Q6ZS94 237 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC9-205ENST00000518839 TGIF2LXQ8IUE1 241 aa12.28□□□□□ -0.44
TRAPPC9-205ENST00000518839 DMBX1Q8NFW5 382 aa12.28□□□□□ -0.44
TRAPPC9-205ENST00000518839 ST6GALNAC6Q969X2 333 aa12.28□□□□□ -0.44
TRAPPC9-205ENST00000518839 MARVELD3Q96A59 401 aa12.28□□□□□ -0.44
TRAPPC9-205ENST00000518839 RAB40CQ96S21 281 aa12.28□□□□□ -0.44
TRAPPC9-205ENST00000518839 ARPC5LQ9BPX5 153 aa12.28□□□□□ -0.44
TRAPPC9-205ENST00000518839 ZC4H2Q9NQZ6 224 aa12.28□□□□□ -0.44
TRAPPC9-205ENST00000518839 UBR5O95071 2799 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC9-205ENST00000518839 VWC2LB2RUY7 222 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 LY86O95711 162 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 IFNA7P01567 189 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 HKR1P10072 659 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 RPL12P30050 165 aaKnown RBP12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 MC5RP33032 325 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 RAB13P51153 203 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 ARF6P62330 175 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 POLR2GP62487 172 aaKnown RBP eCLIP12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 UBA52P62987 128 aaKnown RBP12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 POU2AF1Q16633 256 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 MIDNQ504T8 468 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 CXorf66Q5JRM2 361 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 TEX261Q6UWH6 196 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 Q6ZRM9 215 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 PDPNQ86YL7 162 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 OR11H6Q8NGC7 330 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 OR8H1Q8NGG4 311 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 OR5AN1Q8NGI8 311 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 OSR1Q8TAX0 266 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 SLC25A31Q9H0C2 315 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 C11orf1Q9H5F2 150 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 UNKLQ9H9P5 680 aaKnown RBP12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 POLR3KQ9Y2Y1 108 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 U3KQ87 197 aa12.27□□□□□ -0.45
TRAPPC9-205ENST00000518839 IGHV2-70DA0A0C4DH43 119 aa12.26□□□□□ -0.45
TRAPPC9-205ENST00000518839 SYNGR2O43760 224 aa12.26□□□□□ -0.45
TRAPPC9-205ENST00000518839 CRYZL1O95825 349 aa12.26□□□□□ -0.45
TRAPPC9-205ENST00000518839 LINC00205P59089 165 aa12.26□□□□□ -0.45
TRAPPC9-205ENST00000518839 RPL23AP62750 156 aaKnown RBP12.26□□□□□ -0.45
TRAPPC9-205ENST00000518839 EIF5AP63241 154 aaKnown RBP12.26□□□□□ -0.45
TRAPPC9-205ENST00000518839 ZNF787Q6DD87 383 aa12.26□□□□□ -0.45
TRAPPC9-205ENST00000518839 Q8N7P7 452 aa12.26□□□□□ -0.45
TRAPPC9-205ENST00000518839 NABP2Q9BQ15 211 aa12.26□□□□□ -0.45
TRAPPC9-205ENST00000518839 MRPL20Q9BYC9 149 aaKnown RBP12.26□□□□□ -0.45
TRAPPC9-205ENST00000518839 H0YJW9 148 aa12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 BUB1B-PAK6H3BSN5 160 aa12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 SSSCA1O60232 199 aa12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 GAPDHP04406 335 aaKnown RBP12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 SLC25A16P16260 332 aa12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 COX7A1P24310 79 aa12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 ZFP36P26651 326 aaKnown RBP12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 CEACAM3P40198 252 aa12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 TAS2R30P59541 319 aa12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 PNKDQ8N490 385 aa12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 OR2C3Q8N628 320 aa12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 OR4A16Q8NH70 328 aa12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 PERPQ96FX8 193 aa12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 LYRM2Q9NU23 88 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 BEX4Q9NWD9 120 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 ZNRD1Q9P1U0 126 aa12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 HSPB7Q9UBY9 170 aa12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 WASHC3Q9Y3C0 194 aa12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 WSB1Q9Y6I7 421 aa12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 SPTAN1Q13813 2472 aaKnown RBP12.25□□□□□ -0.45
TRAPPC9-205ENST00000518839 MSGN1A6NI15 193 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 H7C2Y5 167 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 ARID1AO14497 2285 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 CHST1O43916 411 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 RBMXL2O75526 392 aaKnown RBP12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 LCN2P80188 198 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 PAX2Q02962 417 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 TNFRSF9Q07011 255 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 BAXQ07812 192 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 IZUMO4Q1ZYL8 232 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 AARDQ4LEZ3 155 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 TMEM177Q53S58 311 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 ZNF680Q8NEM1 530 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 OR4P4Q8NGL7 312 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 OR4C13Q8NGP0 309 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 OR52E5Q8NH55 327 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 SMIM8Q96KF7 97 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 RHOVQ96L33 236 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 CIB3Q96Q77 187 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 ZNF471Q9BX82 626 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 MAGT1Q9H0U3 335 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 TMEM140Q9NV12 185 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 UBQLN2Q9UHD9 624 aa12.24□□□□□ -0.45
TRAPPC9-205ENST00000518839 LEUTXA8MZ59 168 aa12.23□□□□□ -0.45
TRAPPC9-205ENST00000518839 SHOXO15266 292 aa12.23□□□□□ -0.45
TRAPPC9-205ENST00000518839 ARG1P05089 322 aa12.23□□□□□ -0.45
TRAPPC9-205ENST00000518839 HTR1DP28221 377 aa12.23□□□□□ -0.45
TRAPPC9-205ENST00000518839 CAV2P51636 162 aa12.23□□□□□ -0.45
TRAPPC9-205ENST00000518839 UBE2KP61086 200 aa12.23□□□□□ -0.45
TRAPPC9-205ENST00000518839 NDUFA5Q16718 116 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms