RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 GABARAPL1Q9H0R8 117 aa1.77□□□□□ -2.13
SCARNA11.3-201ENST00000517276 LINC00574Q9H8X3 128 aa1.77□□□□□ -2.13
SCARNA11.3-201ENST00000517276 RPS10P5Q9NQ39 176 aa1.77□□□□□ -2.13
SCARNA11.3-201ENST00000517276 GPR84Q9NQS5 396 aa1.77□□□□□ -2.13
SCARNA11.3-201ENST00000517276 PRTFDC1Q9NRG1 225 aa1.77□□□□□ -2.13
SCARNA11.3-201ENST00000517276 ENOPH1Q9UHY7 261 aa1.77□□□□□ -2.13
SCARNA11.3-201ENST00000517276 TMEM14AQ9Y6G1 99 aa1.77□□□□□ -2.13
SCARNA11.3-201ENST00000517276 CHD5Q8TDI0 1954 aa1.77□□□□□ -2.13
SCARNA11.3-201ENST00000517276 NUP214P35658 2090 aaPredicted RBP1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 CRB1P82279 1406 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 ITGB4P16144 1822 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 IGHV1-69-2A0A0G2JMI3 117 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 A0A0J9YY10 115 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 A0A1B0GX78 115 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 A0A1W2PRE2 83 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 IGSF23A1L1A6 192 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 A8MWP4 228 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 K7ERS5 55 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 ZNF682O95780 498 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 IGKV1D-33P01593 117 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 IGKV1-33P01594 117 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 GYPCP04921 128 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 C8GP07360 202 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 C1GALT1C1LP0DN25 315 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 ELK1P19419 428 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 NPY1RP25929 384 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 ATP5G3P48201 142 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 FLI1Q01543 452 aaPredicted RBP1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 GNA12Q03113 381 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 BAMBIQ13145 260 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 RHEBQ15382 184 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 CST6Q15828 149 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 GRK1Q15835 563 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 ZNF79Q15937 498 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 PLPPR5Q32ZL2 321 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 CCDC153Q494R4 210 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 RNF212Q495C1 297 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 AKR1C8PQ5T2L2 129 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 TMEM78Q5T7P6 136 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 SMARCD3Q6STE5 483 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 GPHB5Q86YW7 130 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 FAM24BQ8N5W8 94 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 MIR7-3HGQ8N6C7 128 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 DAND5Q8N907 189 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 ZNF439Q8NDP4 499 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 OR4K13Q8NH42 304 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 SLC25A40Q8TBP6 338 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 BORCS5Q969J3 196 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 ROPN1LQ96C74 230 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 CMBLQ96DG6 245 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 MS4A6EQ96DS6 147 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 L3HYPDHQ96EM0 354 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 IGF2BP2-AS1Q96M15 143 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 NMNAT3Q96T66 252 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 NDFIP1Q9BT67 221 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 RSPO3Q9BXY4 272 aaPredicted RBP1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 WDR61Q9GZS3 305 aaKnown RBP1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 C6orf62Q9GZU0 229 aaPredicted RBP1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 OR2D2Q9H210 308 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 TAAR3PQ9P1P4 343 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 TP73-AS1Q9UF72 201 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 PHLDA3Q9Y5J5 127 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 THSD7AQ9UPZ6 1657 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 SCN10AQ9Y5Y9 1956 aa1.76□□□□□ -2.13
SCARNA11.3-201ENST00000517276 RPRD2Q5VT52 1461 aaKnown RBP1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 MYO5BQ9ULV0 1848 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 IGSF9BQ9UPX0 1349 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 TRBV20OR9-2A0A075B6H5 130 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 IGHV3OR15-7A0A075B7D8 119 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 IGHV3-21A0A0B4J1V1 117 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 IGKV1D-43A0A0B4J1Z2 117 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 PRORSD1PA6NEY8 169 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 SIGLEC16A6NMB1 481 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 H7C1C5 153 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 PIRO00625 290 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 PLA2G10O15496 165 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 ORC5O43913 435 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 IGHV1-46P01743 117 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 PPBPP02775 128 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 CSN2P05814 226 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 LINC00869P0C866 280 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 SCGB1A1P11684 91 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 SPI1P17947 270 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 IL1RNP18510 177 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 OPRM1P35372 400 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 PSMD8P48556 350 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 ZNF140P52738 457 aaPredicted RBP1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 FGF12P61328 243 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 LCN6P62502 163 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 HNRNPA0Q13151 305 aaKnown RBP1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 EIF4EBP2Q13542 120 aaPredicted RBP1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 TMEM128Q5BJH2 165 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 IBA57Q5T440 356 aaKnown RBP1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 GFI1BQ5VTD9 330 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 SAMD13Q5VXD3 122 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 FAM104BQ5XKR9 115 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 WDR59Q6PJI9 974 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 Q6ZS49 121 aa1.75□□□□□ -2.13
SCARNA11.3-201ENST00000517276 SLC22A24Q8N4F4 322 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms