RNA–Protein interactions for RNA: ENST00000515460.5

NUP54-218, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-218ENST00000515460 MMDQ15546 238 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 EXT1Q16394 746 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 ANKRD55Q3KP44 614 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 ODF3L2Q3SX64 289 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 ZNF766Q5HY98 468 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 TECRLQ5HYJ1 363 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 ASPHD1Q5U4P2 390 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 AADACL3Q5VUY0 350 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 RTL6Q6ICC9 239 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 SPINK14Q6IE38 97 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 MRPL54Q6P161 138 aaKnown RBP4.57□□□□□ -1.68
NUP54-218ENST00000515460 UNQ5815/PRO19632Q6UWF5 114 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 C18orf65Q6ZTR6 163 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 MDGA2Q7Z553 956 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 CPEB2Q7Z5Q1 589 aaKnown RBP4.57□□□□□ -1.68
NUP54-218ENST00000515460 ANKRD37Q7Z713 158 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 OR8I2Q8N0Y5 310 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 TMEM251Q8N6I4 163 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 SUMF2Q8NBJ7 301 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 POC1AQ8NBT0 407 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 MDS2Q8NDY4 140 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 OR10G2Q8NGC3 310 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 OR4K17Q8NGC6 315 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 OR5A1Q8NGJ0 315 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 OR4X1Q8NH49 305 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 TMED6Q8WW62 240 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 PPCDCQ96CD2 204 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 TM4SF19Q96DZ7 209 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 TVP23CQ96ET8 276 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 MS4A10Q96PG2 267 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 VN1R1Q9GZP7 353 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 MAP6D1Q9H9H5 199 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 LYRM4Q9HD34 91 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 OBP2BQ9NPH6 170 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 TMEM106BQ9NUM4 274 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 LIN7CQ9NUP9 197 aaKnown RBP4.57□□□□□ -1.68
NUP54-218ENST00000515460 MED29Q9NX70 200 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 SPANXCQ9NY87 97 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 TAS2R16Q9NYV7 291 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 DNAJC27Q9NZQ0 273 aa4.57□□□□□ -1.68
NUP54-218ENST00000515460 A0A0G2JMM0 328 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 A0A1W2PPB8 328 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 IGLC7A0M8Q6 106 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 TMEM189A5PLL7 270 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 OOEPA6NGQ2 149 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 SLC22A20A6NK97 555 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 KIR3DP1A8MWS1 328 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 FTCDNL1E5RQL4 147 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 M0QXV9 152 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 ZNF207O43670 478 aaKnown RBP4.56□□□□□ -1.68
NUP54-218ENST00000515460 FCMRO60667 390 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 YPEL1O60688 119 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 UTS2O95399 124 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 IFNA1P01562 189 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 STATHP02808 62 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 MAS1P04201 325 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 SP1P08047 785 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 C8orf89P0DMQ9 161 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 LYL1P12980 280 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 GNB3P16520 340 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 HOXB9P17482 250 aaPredicted RBP4.56□□□□□ -1.68
NUP54-218ENST00000515460 USF1P22415 310 aaPredicted RBP4.56□□□□□ -1.68
NUP54-218ENST00000515460 CHI3L1P36222 383 aaPredicted RBP4.56□□□□□ -1.68
NUP54-218ENST00000515460 GUCA1AP43080 201 aaPredicted RBP4.56□□□□□ -1.68
NUP54-218ENST00000515460 GPM6AP51674 278 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 TCTAP57738 103 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 MTPNP58546 118 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 TPPP2P59282 170 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 GNG3P63215 75 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 PLCXD2Q0VAA5 305 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 SMAGPQ0VAQ4 97 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 RAB40BQ12829 278 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 ZP4Q12836 540 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 FAM53BQ14153 422 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 SLC25A53Q5H9E4 307 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 UBE2NLQ5JXB2 153 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 ENTPD8Q5MY95 495 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 SFXN4Q6P4A7 337 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 ASCL4Q6XD76 172 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 Q6ZN92 141 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 H2BFWTQ7Z2G1 175 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 VN1R4Q7Z5H5 301 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 C17orf64Q86WR6 236 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 KLHDC8AQ8IYD2 350 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 RAB42Q8N4Z0 105 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 SMIM20Q8N5G0 67 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 OR52I1Q8NGK6 324 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 OR10G4Q8NGN3 311 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 OR1B1Q8NGR6 318 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 OR52I2Q8NH67 350 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 KCNG3Q8TAE7 436 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 FCAMRQ8WWV6 532 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 PTX4Q96A99 478 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 RNF125Q96EQ8 232 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 ZNF582Q96NG8 517 aaPredicted RBP4.56□□□□□ -1.68
NUP54-218ENST00000515460 YPEL2Q96QA6 119 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 PYGO2Q9BRQ0 406 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 ZDHHC11Q9H8X9 412 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 AMBNQ9NP70 447 aa4.56□□□□□ -1.68
NUP54-218ENST00000515460 RAB9BQ9NP90 201 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms