RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 OR8G5Q8NG78 346 aa11.44□□□□□ -0.58
TCOF1-214ENST00000515035 MARS2Q96GW9 593 aaKnown RBP11.44□□□□□ -0.58
TCOF1-214ENST00000515035 RAB1BQ9H0U4 201 aa11.44□□□□□ -0.58
TCOF1-214ENST00000515035 ZNF430Q9H8G1 570 aaPredicted RBP11.44□□□□□ -0.58
TCOF1-214ENST00000515035 HEXA-AS1Q9H8Q6 139 aa11.44□□□□□ -0.58
TCOF1-214ENST00000515035 MGST3O14880 152 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 LIFP15018 202 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FAM169BQ8N8A8 192 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 NDUFAF3Q9BU61 184 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 TBL2Q9Y4P3 447 aaKnown RBP11.43□□□□□ -0.58
TCOF1-214ENST00000515035 RTTNQ86VV8 2226 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FAM90A10PA6NDY2 464 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FAM90A18PA6NE21 464 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FAM90A16PA6NEW6 464 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FAM90A20PA6NIJ5 464 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FAM90A8PA6NJQ4 464 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FAM90A7PA6NKC0 464 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FAM90A22PA8MWA6 464 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FAM90A12PA8MX19 464 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FAM90A5PA8MXJ8 464 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FAM90A23PA8MXZ1 464 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 SLC25A17O43808 307 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FAM90A15PP0C7V4 464 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FAM90A13PP0C7W8 464 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FAM90A14PP0C7W9 464 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FAM90A24PP0C7X0 464 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 LGALS3P17931 250 aaKnown RBP11.43□□□□□ -0.58
TCOF1-214ENST00000515035 KLRB1Q12918 225 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 MDP1Q86V88 176 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 ALKBH7Q9BT30 221 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-214ENST00000515035 PSMG3Q9BT73 122 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-214ENST00000515035 RAXQ9Y2V3 346 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FOXS1O43638 330 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 SFTPCP11686 197 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FOXA3P55318 350 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-214ENST00000515035 JOSD1Q15040 202 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-214ENST00000515035 A0A1B0GWB2 263 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 SHISA3A0PJX4 238 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 PEBP1P30086 187 aaKnown RBP11.43□□□□□ -0.58
TCOF1-214ENST00000515035 CA7P43166 264 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 RND2P52198 227 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 SOX8P57073 446 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 OR4D5Q8NGN0 318 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 RCC1LQ96I51 464 aaKnown RBP11.43□□□□□ -0.58
TCOF1-214ENST00000515035 IGHV5-10-1A0A0J9YXX1 117 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 FAM90A27PA6NNH2 459 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 TSPAN2O60636 221 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 IGHV4-34P06331 123 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 ECSCRQ19T08 205 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 STPG1Q5TH74 334 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 INO80CQ6PI98 192 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-214ENST00000515035 WFDC3Q8IUB2 231 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 SGK494Q96LW2 274 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 WNT5BQ9H1J7 359 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 ZNF71Q9NQZ8 489 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-214ENST00000515035 KCNMB2Q9Y691 235 aa11.43□□□□□ -0.58
TCOF1-214ENST00000515035 CACNA1IQ9P0X4 2223 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 KIAA1217Q5T5P2 1943 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 DLL1O00548 723 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 OR2H2O95918 312 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 STARD6P59095 220 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 FBXW9Q5XUX1 488 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 HCP5Q6MZN7 132 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 TNFRSF19Q9NS68 423 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 OR11H12B2RN74 326 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 SPINT1O43278 529 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 TSPAN13O95857 204 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 TNFSF10P50591 281 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 PRSS8Q16651 343 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 CENPWQ5EE01 88 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 OR11H1Q8NG94 326 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 OR11H2Q8NH07 326 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 ZNF721Q8TF20 911 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 SMIM8Q96KF7 97 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 KLK15Q9H2R5 256 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 BEX4Q9NWD9 120 aaPredicted RBP11.42□□□□□ -0.58
TCOF1-214ENST00000515035 C19orf54Q5BKX5 351 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 MBNL2Q5VZF2 373 aaKnown RBP11.42□□□□□ -0.58
TCOF1-214ENST00000515035 CYP2G1PQ6ZSU1 146 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 ASCL5Q7RTU5 278 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 WDYHV1Q96HA8 205 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 B4E171 279 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 S1PR2O95136 353 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 CD3EP07766 207 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 SRP19P09132 144 aaKnown RBP11.42□□□□□ -0.58
TCOF1-214ENST00000515035 STAG3L3P0CL85 134 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 FGF5P12034 268 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 TSPAN7P41732 249 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 RPL8P62917 257 aaKnown RBP11.42□□□□□ -0.58
TCOF1-214ENST00000515035 OR4A5Q8NH83 315 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 ST6GALNAC6Q969X2 333 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 KCNK17Q96T54 332 aa11.42□□□□□ -0.58
TCOF1-214ENST00000515035 HOXB1P14653 301 aaPredicted RBP11.41□□□□□ -0.58
TCOF1-214ENST00000515035 ZNF124Q15973 351 aa11.41□□□□□ -0.58
TCOF1-214ENST00000515035 A0A0J9YW62 118 aa11.41□□□□□ -0.58
TCOF1-214ENST00000515035 MARCH11A6NNE9 402 aa11.41□□□□□ -0.58
TCOF1-214ENST00000515035 RTP5Q14D33 572 aa11.41□□□□□ -0.58
TCOF1-214ENST00000515035 ZNF414Q96IQ9 312 aa11.41□□□□□ -0.58
TCOF1-214ENST00000515035 TRAV8-6A0A0B4J262 113 aa11.41□□□□□ -0.58
TCOF1-214ENST00000515035 HSPE1P61604 102 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms