RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 TMEM222Q9H0R3 208 aa6.74□□□□□ -1.33
CCL28-204ENST00000514421 RAB9BQ9NP90 201 aa6.74□□□□□ -1.33
CCL28-204ENST00000514421 CALYQ9NYX4 217 aa6.74□□□□□ -1.33
CCL28-204ENST00000514421 IDI2-AS1Q9NZ38 188 aa6.74□□□□□ -1.33
CCL28-204ENST00000514421 COMMD9Q9P000 198 aa6.74□□□□□ -1.33
CCL28-204ENST00000514421 TRAPPC2LQ9UL33 140 aa6.74□□□□□ -1.33
CCL28-204ENST00000514421 TBL2Q9Y4P3 447 aaKnown RBP6.74□□□□□ -1.33
CCL28-204ENST00000514421 MINOS1-NBL1R4GNA1 71 aa6.74□□□□□ -1.33
CCL28-204ENST00000514421 STAB1Q9NY15 2570 aa6.74□□□□□ -1.33
CCL28-204ENST00000514421 FXYD6-FXYD2A0A087WZ82 144 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 A0A087X0M5 115 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 IGKV1D-13A0A0B4J2D9 117 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 A0A1B0GX30 115 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 RPS10-NUDT3A0A1W2PQS6 291 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 TMEM89A2RUT3 159 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 LINC00862A6NCI5 91 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 C5orf51A6NDU8 294 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 MPTX1A8MV57 137 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 ODF3BA8MYP8 253 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 H0YIZ8 118 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 ARPC5O15511 151 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 CDS2O95674 445 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 CFDP00746 253 aaPredicted RBP6.73□□□□□ -1.33
CCL28-204ENST00000514421 IGLV2-14P01704 120 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 OR5AC1P0C628 307 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 PET100P0DJ07 73 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 IGKV1-13P0DP09 117 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 S100A1P23297 94 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 NFYBP25208 207 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 UCP1P25874 307 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 EXOSC2Q13868 293 aaKnown RBP6.73□□□□□ -1.33
CCL28-204ENST00000514421 ABCA11PQ4W5N1 156 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 CLLU1Q5K131 121 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 C6orf183Q5T699 404 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
CCL28-204ENST00000514421 TRAT1Q6PIZ9 186 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 LHFPL4Q7Z7J7 247 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 SLC51BQ86UW2 128 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 LGI3Q8N145 548 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.73□□□□□ -1.33
CCL28-204ENST00000514421 OR8H1Q8NGG4 311 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 OR52M1Q8NGK5 317 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 OR5R1Q8NH85 324 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 OR10J5Q8NHC4 309 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 THAP6Q8TBB0 222 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 ZNF596Q8TC21 504 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 C17orf50Q8WW18 174 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 TOMM40LQ969M1 308 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 PHYHIPLQ96FC7 376 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 SEC22AQ96IW7 307 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 KIRREL1Q96J84 757 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 AKR1E2Q96JD6 320 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 AQP10Q96PS8 301 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 SSX3Q99909 188 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 PDCD10Q9BUL8 212 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 TNFRSF19Q9NS68 423 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 KCNIP1Q9NZI2 227 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 ZNRD1Q9P1U0 126 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 DPM3Q9P2X0 92 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 TMED3Q9Y3Q3 217 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 CUBNO60494 3623 aa6.73□□□□□ -1.33
CCL28-204ENST00000514421 LOC100996750A0A140TA64 210 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 C3orf85A0A1B0GTC6 90 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 BTBD17A6NE02 478 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 LEUTXA8MZ59 168 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 H0Y980 276 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 C15orf65H3BRN8 121 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 J3QR06 171 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 BET1O15155 118 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 SPINT2O43291 252 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 BCL2L11O43521 198 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 IFNA21P01568 189 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 IGLV1-47P01700 117 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 IGHV4-59P01825 116 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 CRYBA1P05813 215 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 HKR1P10072 659 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 SLC25A6P12236 298 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 HTR1DP28221 377 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 HTR2BP41595 481 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 FXYD4P59646 89 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 HTD2P86397 168 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 EIF4EBP1Q13541 118 aaPredicted RBP6.72□□□□□ -1.33
CCL28-204ENST00000514421 SSX2Q16385 188 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 LTC4SQ16873 150 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 GGNBP1Q5YKI7 109 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 ZNF818PQ6ZRF7 136 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 SLC7A5P1Q8MH63 180 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 OR4P4Q8NGL7 312 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 OR9G1Q8NH87 305 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 LHFPL5Q8TAF8 219 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 STOML3Q8TAV4 291 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 ABHD14BQ96IU4 210 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 TP53RKQ96S44 253 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 KRTAP4-6Q9BYQ5 205 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 SLC5A7Q9GZV3 580 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 ARL6Q9H0F7 186 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 TAF9BQ9HBM6 251 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 FAM212BQ9NTI7 297 aaPredicted RBP6.72□□□□□ -1.33
CCL28-204ENST00000514421 ZFP57Q9NU63 452 aa6.72□□□□□ -1.33
CCL28-204ENST00000514421 MED9Q9NWA0 146 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms