RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 FAM173AQ9BQD7 235 aa8.15□□□□□ -1.1
VCAN-210ENST00000513960 TMEM147Q9BVK8 224 aa8.15□□□□□ -1.1
VCAN-210ENST00000513960 MTCH1Q9NZJ7 389 aa8.15□□□□□ -1.1
VCAN-210ENST00000513960 ZG16O60844 167 aa8.15□□□□□ -1.1
VCAN-210ENST00000513960 MGST1P10620 155 aaKnown RBP8.15□□□□□ -1.1
VCAN-210ENST00000513960 ASCL4Q6XD76 172 aa8.15□□□□□ -1.1
VCAN-210ENST00000513960 Q6ZWC4 215 aa8.15□□□□□ -1.1
VCAN-210ENST00000513960 BORCS7Q96B45 105 aa8.15□□□□□ -1.1
VCAN-210ENST00000513960 ATP23Q9Y6H3 246 aa8.15□□□□□ -1.1
VCAN-210ENST00000513960 SVILO95425 2214 aa8.15□□□□□ -1.11
VCAN-210ENST00000513960 IGKV1-6A0A0C4DH72 117 aa8.15□□□□□ -1.11
VCAN-210ENST00000513960 GFRA1P56159 465 aa8.15□□□□□ -1.11
VCAN-210ENST00000513960 PLGLB1Q02325 96 aa8.15□□□□□ -1.11
VCAN-210ENST00000513960 MRPL54Q6P161 138 aaKnown RBP8.15□□□□□ -1.11
VCAN-210ENST00000513960 F2Z2F3 143 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 H0Y8G0 127 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 FAM58AQ8N1B3 248 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 FGFRL1Q8N441 504 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 OR2M7Q8NG81 312 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 SSMEM1Q8WWF3 244 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 SLC35E1Q96K37 410 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 C11orf1Q9H5F2 150 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 IL36GQ9NZH8 169 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 ANKRD30BLA7E2S9 258 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 FAM166BA8MTA8 275 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 ZNF253O75346 499 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 TNFSF13O75888 250 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 ACTL6BO94805 426 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 H2BFWTQ7Z2G1 175 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 SFRP2Q96HF1 295 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 PRDM14Q9GZV8 571 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 ASCL3Q9NQ33 180 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 CFAP54Q96N23 3096 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 IGKV1-5P01602 117 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 HLA-DRB5Q30154 266 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 PRR31Q5SQ13 230 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 UNQ5815/PRO19632Q6UWF5 114 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 C20orf204Q6ZNR8 217 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 OR8I2Q8N0Y5 310 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 FAM19A2Q8N3H0 131 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 ZNF114Q8NC26 417 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 CPEB3Q8NE35 698 aaKnown RBP8.14□□□□□ -1.11
VCAN-210ENST00000513960 TMEM45BQ96B21 275 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 C1QTNF5Q9BXJ0 243 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 OR2D2Q9H210 308 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 ARRDC1-AS1Q9H2J1 176 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 WIPI2Q9Y4P8 454 aa8.14□□□□□ -1.11
VCAN-210ENST00000513960 IGHV3-43A0A0B4J1X8 118 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 DEFB108AA8MXU0 73 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 IGHV3-13P01766 116 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 IGHV3-7P01780 117 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 IGHV3-43DP0DP04 118 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 PLP2Q04941 152 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 KRTAP27-1Q3LI81 207 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 LEMD1Q68G75 181 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 LINC00696Q6ZRV3 163 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 TUSC5Q8IXB3 177 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 UHRF2Q96PU4 802 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 HEYLQ9NQ87 328 aaPredicted RBP8.13□□□□□ -1.11
VCAN-210ENST00000513960 PLSCR2Q9NRY7 297 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 TNRC6BQ9UPQ9 1833 aaKnown RBP8.13□□□□□ -1.11
VCAN-210ENST00000513960 KIR2DL5BA0A0G2JN68 375 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 KIR2DL5BA0A0G2JPC4 375 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 LINC00614P0C842 121 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 GNB1P62873 340 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 FXYD3Q14802 87 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 NRN1LQ496H8 165 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 LINC01551Q86U37 167 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 KIR2DL5AQ8N109 375 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 TMEM105Q8N8V8 129 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 ZNF439Q8NDP4 499 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 C22orf15Q8WYQ4 148 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 KCNIP1Q9NZI2 227 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 SCO2A0A1W2PP80 73 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 FGF12P61328 243 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 RPL19P84098 196 aaKnown RBP8.13□□□□□ -1.11
VCAN-210ENST00000513960 OR1C1Q15619 314 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 COA6Q5JTJ3 125 aaKnown RBP8.13□□□□□ -1.11
VCAN-210ENST00000513960 RFESDQ8TAC1 157 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 APOBEC3DQ96AK3 386 aaPredicted RBP8.13□□□□□ -1.11
VCAN-210ENST00000513960 GUCD1Q96NT3 240 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 TBL2Q9Y4P3 447 aaKnown RBP8.13□□□□□ -1.11
VCAN-210ENST00000513960 VPS13AQ96RL7 3174 aa8.13□□□□□ -1.11
VCAN-210ENST00000513960 SH2D1BO14796 132 aa8.12□□□□□ -1.11
VCAN-210ENST00000513960 GRPP07492 148 aa8.12□□□□□ -1.11
VCAN-210ENST00000513960 CELA3AP09093 270 aa8.12□□□□□ -1.11
VCAN-210ENST00000513960 SOX8P57073 446 aa8.12□□□□□ -1.11
VCAN-210ENST00000513960 PAFAH1B2P68402 229 aa8.12□□□□□ -1.11
VCAN-210ENST00000513960 LCN2P80188 198 aa8.12□□□□□ -1.11
VCAN-210ENST00000513960 HES7Q9BYE0 225 aa8.12□□□□□ -1.11
VCAN-210ENST00000513960 ZNF703Q9H7S9 590 aaPredicted RBP8.12□□□□□ -1.11
VCAN-210ENST00000513960 CLCF1Q9UBD9 225 aa8.12□□□□□ -1.11
VCAN-210ENST00000513960 KIAA1549Q9HCM3 1950 aa8.12□□□□□ -1.11
VCAN-210ENST00000513960 NEURL1O76050 574 aa8.12□□□□□ -1.11
VCAN-210ENST00000513960 NXPH2O95156 264 aa8.12□□□□□ -1.11
VCAN-210ENST00000513960 MAGEA5P43359 124 aa8.12□□□□□ -1.11
VCAN-210ENST00000513960 DEFB123Q8N688 67 aa8.12□□□□□ -1.11
VCAN-210ENST00000513960 SPSB4Q96A44 273 aa8.12□□□□□ -1.11
VCAN-210ENST00000513960 PYGO2Q9BRQ0 406 aa8.12□□□□□ -1.11
VCAN-210ENST00000513960 LINC00470Q9BZP3 86 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms