RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 M0R1X1 148 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 HPGDSO60760 199 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 IGF1P05019 195 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 ELK1P19419 428 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 TBPP20226 339 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 RCVRNP35243 200 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 KRTAP10-3P60369 221 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 SSBP1Q04837 148 aaKnown RBP6.48□□□□□ -1.37
NEDD4-210ENST00000513957 HNF4GQ14541 408 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 CDK10Q15131 360 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 C5orf64Q2M2E5 130 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 ACTBL2Q562R1 376 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 LCE2CQ5TA81 110 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 FAM131AQ6UXB0 335 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 C5orf24Q7Z6I8 188 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 CENPVQ7Z7K6 275 aaPredicted RBP6.48□□□□□ -1.37
NEDD4-210ENST00000513957 TCTEX1D1Q8N7M0 179 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 DYNC2LI1Q8TCX1 351 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 GPX8Q8TED1 209 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 GIMAP1Q8WWP7 306 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 MAFIPQ8WZ33 124 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 SNAPC3Q92966 411 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 ISOC1Q96CN7 298 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 FLYWCH2Q96CP2 140 aaKnown RBP6.48□□□□□ -1.37
NEDD4-210ENST00000513957 HSD17B10Q99714 261 aaKnown RBP6.48□□□□□ -1.37
NEDD4-210ENST00000513957 ZNF107Q9UII5 783 aaPredicted RBP6.48□□□□□ -1.37
NEDD4-210ENST00000513957 MRPS7Q9Y2R9 242 aaKnown RBP6.48□□□□□ -1.37
NEDD4-210ENST00000513957 SIGLEC9Q9Y336 463 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 PRELID3BQ9Y3B1 194 aa6.48□□□□□ -1.37
NEDD4-210ENST00000513957 PSMB11A5LHX3 300 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 FAM25AB3EWG3 89 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 FAM25CB3EWG5 89 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 FAM25GB3EWG6 89 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 H3BMQ9 156 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 RRHO14718 337 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 CREBL2O60519 120 aaPredicted RBP6.47□□□□□ -1.37
NEDD4-210ENST00000513957 PROP1O75360 226 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 PPYP01298 95 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 BTF3P20290 206 aaKnown RBP6.47□□□□□ -1.37
NEDD4-210ENST00000513957 VDAC1P21796 283 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 DUTP33316 252 aaKnown RBP6.47□□□□□ -1.37
NEDD4-210ENST00000513957 CRIP2P52943 208 aaPredicted RBP6.47□□□□□ -1.37
NEDD4-210ENST00000513957 F2RL1P55085 397 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 CD83Q01151 205 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 DYRK1AQ13627 763 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 SPCS2Q15005 226 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 C9orf152Q5JTZ5 239 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 ZNF66Q6ZN08 573 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 STPG2Q8N412 459 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 ARL6IP6Q8N6S5 226 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 GVQW1Q8N7I0 195 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 ZNF383Q8NA42 475 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 OR4F17Q8NGA8 305 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 OR5AU1Q8NGC0 362 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 OSR1Q8TAX0 266 aaPredicted RBP6.47□□□□□ -1.37
NEDD4-210ENST00000513957 DDB2Q92466 427 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 OR4F4Q96R69 305 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 AIFM2Q9BRQ8 373 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 SLC35D1Q9NTN3 355 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 TMEM140Q9NV12 185 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 EXTL2Q9UBQ6 330 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 RNF150Q9ULK6 438 aa6.47□□□□□ -1.37
NEDD4-210ENST00000513957 RBMX2Q9Y388 322 aaKnown RBP6.47□□□□□ -1.37
NEDD4-210ENST00000513957 TSSC4Q9Y5U2 329 aaPredicted RBP6.47□□□□□ -1.37
NEDD4-210ENST00000513957 CTDSPLO15194 276 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 RGS5O15539 181 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 IGKV1-16P04430 117 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 ELANEP08246 267 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 NFYAP23511 347 aaPredicted RBP6.46□□□□□ -1.38
NEDD4-210ENST00000513957 FCGR2CP31995 323 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 KIR2DS2P43631 304 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 CATR1Q13166 79 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 PLGLAQ15195 96 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 VAX1Q5SQQ9 334 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 ZNF660Q6AZW8 331 aaPredicted RBP6.46□□□□□ -1.38
NEDD4-210ENST00000513957 TEX38Q6PEX7 206 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 DHRS11Q6UWP2 260 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 KCTD9Q7L273 389 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 OR5H2Q8NGV7 314 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 VSTM2AQ8TAG5 236 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 C1orf43Q9BWL3 253 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 SLIRPQ9GZT3 109 aaKnown RBP6.46□□□□□ -1.38
NEDD4-210ENST00000513957 OR51J1Q9H342 316 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 ZFP57Q9NU63 452 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 EHFQ9NZC4 300 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 NDUFA13Q9P0J0 144 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 A3GALT2U3KPV4 340 aa6.46□□□□□ -1.38
NEDD4-210ENST00000513957 A0A087WWL8 130 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 IGHV7-81A0A0B4J1V7 117 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 GABARAPH6UMI1 98 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 RBFOX2O43251 390 aaKnown RBP eCLIP6.45□□□□□ -1.38
NEDD4-210ENST00000513957 IGLV2-14P01704 120 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 IGHG4P01861 327 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 CLEC3BP05452 202 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 FGF2P09038 288 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 AADACP22760 399 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 S100GP29377 79 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 UBE2KP61086 200 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 HERV-K104P61576 105 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 SRSF4Q08170 494 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms