RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 PATE3B3GLJ2 98 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 SMPD2O60906 423 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 OR2J3O76001 311 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 COL8A1P27658 744 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 JOSD1Q15040 202 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-209ENST00000513761 GABRA6Q16445 453 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 SMRP1Q8NCR6 262 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 OR4D5Q8NGN0 318 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 NLRC5Q86WI3 1866 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 FAM90A26D6RGX4 464 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 RHBDL1O75783 438 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 CD55P08174 381 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 CSRP2Q16527 193 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 DOLPP1Q86YN1 238 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 ZADH2Q8N4Q0 377 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 ST6GALNAC3Q8NDV1 305 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 OR51G1Q8NGK1 321 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 GATAD1Q8WUU5 269 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 NPCDR1Q9BY65 106 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 PPP1R14DQ9NXH3 145 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 HS3ST3B1Q9Y662 390 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 TMEM56-RWDD3S4R434 201 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 HEATR5AQ86XA9 2040 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 J3QR89 54 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 RAB29O14966 203 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 CLDN14O95500 239 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 FBXW9Q5XUX1 488 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 ZCCHC14Q8WYQ9 949 aaKnown RBP6.61□□□□□ -1.35
CLCN3-209ENST00000513761 SGK494Q96LW2 274 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 ZNF581Q9P0T4 197 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 CACNA1EQ15878 2313 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 AMBPP02760 352 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 QRFPP83859 136 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 C10orf113Q5VZT2 155 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 PRDM14Q9GZV8 571 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 OR51B2Q9Y5P1 312 aa6.61□□□□□ -1.35
CLCN3-209ENST00000513761 ICE1Q9Y2F5 2266 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 TCF20Q9UGU0 1960 aaKnown RBP6.6□□□□□ -1.35
CLCN3-209ENST00000513761 PGPEP1LA6NFU8 196 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 MT-ND6P03923 174 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 CLEC3BP05452 202 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 REG1BP48304 166 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 PPOXP50336 477 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 DHRS13Q6UX07 377 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 OR8A1Q8NGG7 326 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 OR5R1Q8NH85 324 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 WDYHV1Q96HA8 205 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 ZPBPQ9BS86 351 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 SSBP3Q9BWW4 388 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-209ENST00000513761 CHCHD2Q9Y6H1 151 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-209ENST00000513761 CEP250Q9BV73 2442 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 ISLRO14498 428 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 TMPRSS2O15393 492 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 MPDU1O75352 247 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 KCNMB1Q16558 191 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 C1QL4Q86Z23 238 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 LEAP2Q969E1 77 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 C14orf144Q96I85 54 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 PARD6GQ9BYG4 376 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-209ENST00000513761 TRPM7Q96QT4 1865 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 SCO2A0A1W2PP80 73 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 ODAMA1E959 279 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 MT-CO3P00414 261 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 HIST1H1EP10412 219 aaKnown RBP6.6□□□□□ -1.35
CLCN3-209ENST00000513761 CCL1P22362 96 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 PRDX2P32119 198 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 RPL31P62899 125 aaKnown RBP6.6□□□□□ -1.35
CLCN3-209ENST00000513761 TNFAIP6P98066 277 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-209ENST00000513761 DEFB109BQ30KR1 87 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 NGBQ9NPG2 151 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 PLSCR2Q9NRY7 297 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 IFITM10A6NMD0 228 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 FAM87AP0C7U9 286 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 C1QTNF9P0C862 333 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 SSTR5P35346 364 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 TNFSF10P50591 281 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 KLF3P57682 345 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-209ENST00000513761 RPL11P62913 178 aaKnown RBP6.6□□□□□ -1.35
CLCN3-209ENST00000513761 HARBI1Q96MB7 349 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 OR2V2Q96R30 315 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 HES7Q9BYE0 225 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 A6NNC1 897 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 EFNA2O43921 213 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 VENTXO95231 258 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 RFPL3SP0C7P2 107 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 UQCRFS1P47985 274 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 PCOLCEQ15113 449 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 RIPPLY2Q5TAB7 128 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 TGIF2LYQ8IUE0 185 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 OR2T6Q8NHC8 308 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 CCL17Q92583 94 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 ADTRPQ96IZ2 230 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 CFHR5Q9BXR6 569 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 TTTY12Q9BZ98 90 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 PRNDQ9UKY0 176 aa6.6□□□□□ -1.35
CLCN3-209ENST00000513761 IGKV1-12A0A0C4DH73 117 aa6.59□□□□□ -1.35
CLCN3-209ENST00000513761 A0A1W2PQM1 296 aa6.59□□□□□ -1.35
CLCN3-209ENST00000513761 IGKV1D-12P01611 117 aa6.59□□□□□ -1.35
CLCN3-209ENST00000513761 LGALS4P56470 323 aa6.59□□□□□ -1.35
CLCN3-209ENST00000513761 SAXO1Q8IYX7 474 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms