RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), human

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GYPB-215	ENST00000513677	MBP	P02686	304 aa	Predicted RBP	4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	CT45A6	P0DMU7	189 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	CT45A5	P0DMU8	189 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	CT45A7	P0DMV0	189 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	CRIP2	P52943	208 aa	Predicted RBP	4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	LINC00205	P59089	165 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	SSBP2	P81877	361 aa	Predicted RBP	4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	GPR176	Q14439	515 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	AKIRIN2	Q53H80	203 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	DMKN	Q6E0U4	476 aa	Predicted RBP	4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	AWAT2	Q6E213	333 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	XAF1	Q6GPH4	301 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	IL34	Q6ZMJ4	242 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	SYS1	Q8N2H4	156 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	ZFP41	Q8N8Y5	198 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	MRPL30	Q8TCC3	161 aa	Known RBP	4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	GALM	Q96C23	342 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	MYCBP	Q99417	103 aa	Predicted RBP	4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	IFI27L2	Q9H2X8	130 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	SLC2A8	Q9NY64	477 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	SIGLEC8	Q9NYZ4	499 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	ABRACL	Q9P1F3	81 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	CKLF	Q9UBR5	152 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	PEF1	Q9UBV8	284 aa	Known RBP	4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	EXOG	Q9Y2C4	368 aa	Known RBP	4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	WASHC3	Q9Y3C0	194 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	AP4S1	Q9Y587	144 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	TNFRSF18	Q9Y5U5	241 aa		4.36	□□□□□ -1.71
GYPB-215	ENST00000513677	FRAS1	Q86XX4	4008 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	TRAV8-7	A0A075B6U6	113 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677		A0A0J9YWU9	116 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	OR5H14	A6NHG9	310 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	EI24	O14681	340 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	RAB29	O14966	203 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	YPEL1	O60688	119 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	PRH1	P02810	166 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	MGMT	P16455	207 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	EDN2	P20800	178 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	FUT3	P21217	361 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	MC5R	P33032	325 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	LGALS7	P47929	136 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	ALDH3A2	P51648	485 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	SNRPG	P62308	76 aa	Known RBP	4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	HTD2	P86397	168 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	PJVK	Q0ZLH3	352 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	KLF9	Q13886	244 aa	Predicted RBP	4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	OR2G6	Q5TZ20	316 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	C1orf146	Q5VVC0	180 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	MEDAG	Q5VYS4	303 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	MORN5	Q5VZ52	161 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	FAM90A2P	Q658T7	463 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	ZNF562	Q6V9R5	426 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	OR52I1	Q8NGK6	324 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	TRUB1	Q8WWH5	349 aa	Known RBP	4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	NEDD4L	Q96PU5	975 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	YPEL2	Q96QA6	119 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	TSNAX	Q99598	290 aa	Known RBP	4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	FAAP24	Q9BTP7	215 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	PIPOX	Q9P0Z9	390 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	OR1A1	Q9P1Q5	309 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	RCC2	Q9P258	522 aa	Known RBP	4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	PEMT	Q9UBM1	199 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	GMPPB	Q9Y5P6	360 aa		4.35	□□□□□ -1.71
GYPB-215	ENST00000513677	NUPR2	A6NF83	97 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677		M0R1X1	148 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	PDCD6	O75340	191 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	CA11	O75493	328 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	RBBP9	O75884	186 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	HLA-A	P01891	365 aa	Known RBP	4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	APOA2	P02652	100 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	IGKV1-16	P04430	117 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	GLA	P06280	429 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	FCGR1A	P12314	374 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	AADAC	P22760	399 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	ETV1	P50549	477 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	MRPL28	Q13084	256 aa	Known RBP	4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	EXOSC2	Q13868	293 aa	Known RBP	4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	SIGIRR	Q6IA17	410 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	OR10K2	Q6IF99	312 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	RPL22L1	Q6P5R6	122 aa	Known RBP	4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	C6orf201	Q7Z4U5	140 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	SVIP	Q8NHG7	77 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	CACNG8	Q8WXS5	425 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	GHSR	Q92847	366 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	SNAPC3	Q92966	411 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	RPL36AL	Q969Q0	106 aa	Known RBP	4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	CENPN	Q96H22	339 aa	Predicted RBP	4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	SULT4A1	Q9BR01	284 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	OVOL2	Q9BRP0	275 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	KCNK15	Q9H427	330 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	SLC35D1	Q9NTN3	355 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	ZNF221	Q9UK13	617 aa		4.34	□□□□□ -1.71
GYPB-215	ENST00000513677	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.33	□□□□□ -1.72
GYPB-215	ENST00000513677	MSGN1	A6NI15	193 aa		4.33	□□□□□ -1.72
GYPB-215	ENST00000513677	FAM90A23P	A8MXZ1	464 aa		4.33	□□□□□ -1.72
GYPB-215	ENST00000513677	PPP5D1	E7EU14	171 aa		4.33	□□□□□ -1.72
GYPB-215	ENST00000513677		H3BUA1	57 aa		4.33	□□□□□ -1.72

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