RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 TNFAIP8L1Q8WVP5 186 aa6.47□□□□□ -1.37
CLCN3-208ENST00000512813 PELI1Q96FA3 418 aa6.47□□□□□ -1.37
CLCN3-208ENST00000512813 ABHD14BQ96IU4 210 aa6.47□□□□□ -1.37
CLCN3-208ENST00000512813 HARBI1Q96MB7 349 aa6.47□□□□□ -1.37
CLCN3-208ENST00000512813 FANCD2OSQ96PS1 177 aa6.47□□□□□ -1.37
CLCN3-208ENST00000512813 SLC35D1Q9NTN3 355 aa6.47□□□□□ -1.37
CLCN3-208ENST00000512813 ZNF586Q9NXT0 402 aa6.47□□□□□ -1.37
CLCN3-208ENST00000512813 KCNIP1Q9NZI2 227 aa6.47□□□□□ -1.37
CLCN3-208ENST00000512813 CRCT1Q9UGL9 99 aa6.47□□□□□ -1.37
CLCN3-208ENST00000512813 STEAP1Q9UHE8 339 aa6.47□□□□□ -1.37
CLCN3-208ENST00000512813 KLK9Q9UKQ9 250 aa6.47□□□□□ -1.37
CLCN3-208ENST00000512813 GMPPBQ9Y5P6 360 aa6.47□□□□□ -1.37
CLCN3-208ENST00000512813 MFSD2BA6NFX1 497 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 NPIPB5A8MRT5 1133 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 H3BN98 237 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 GABRPO00591 440 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 CA11O75493 328 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 CCNB2O95067 398 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 FABP3P05413 133 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 RPA2P15927 270 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 EMP1P54849 157 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 TMEM244Q5VVB8 128 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 PLET1Q6UQ28 207 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 CD300LDQ6UXZ3 194 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 SSX9Q7RTT3 188 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 BCDIN3DQ7Z5W3 292 aaKnown RBP6.46□□□□□ -1.38
CLCN3-208ENST00000512813 SLC35F2Q8IXU6 374 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 MCUR1Q96AQ8 359 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 GALMQ96C23 342 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 CPNE2Q96FN4 548 aaPredicted RBP6.46□□□□□ -1.38
CLCN3-208ENST00000512813 PYURFQ96I23 114 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 NEU1Q99519 415 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 AGMATQ9BSE5 352 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 MAGT1Q9H0U3 335 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 FAM30AQ9NZY2 134 aa6.46□□□□□ -1.38
CLCN3-208ENST00000512813 PUS1Q9Y606 427 aaKnown RBP eCLIP6.46□□□□□ -1.38
CLCN3-208ENST00000512813 IGKV3-7A0A075B6H7 116 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 RPS10-NUDT3A0A1W2PQS6 291 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 MCRIP1C9JLW8 97 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 ZNF670-ZNF695F2Z2N8 137 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 K7EMT4 169 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 TNFRSF11BO00300 401 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 ITGB1BP1O14713 200 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 GPX5O75715 221 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 SC5DO75845 299 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 NUDT3O95989 172 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 ISG15P05161 165 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 FAM98BQ52LJ0 330 aaKnown RBP6.45□□□□□ -1.38
CLCN3-208ENST00000512813 TMEM69Q5SWH9 247 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 SSX6Q7RTT6 188 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 CEACAM19Q7Z692 300 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 GBGT1Q8N5D6 347 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 EDARADDQ8WWZ3 215 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 ACOT12Q8WYK0 555 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 CXorf58Q96LI9 332 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 UPK3BQ9BT76 320 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 SPACA1Q9HBV2 294 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 CLN6Q9NWW5 311 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 IL36GQ9NZH8 169 aa6.45□□□□□ -1.38
CLCN3-208ENST00000512813 SRRM4A7MD48 611 aaKnown RBP6.44□□□□□ -1.38
CLCN3-208ENST00000512813 HMGN1P05114 100 aa6.44□□□□□ -1.38
CLCN3-208ENST00000512813 ALDH3B2P48448 385 aa6.44□□□□□ -1.38
CLCN3-208ENST00000512813 C10orf55Q5SWW7 151 aa6.44□□□□□ -1.38
CLCN3-208ENST00000512813 LPCAT4Q643R3 524 aa6.44□□□□□ -1.38
CLCN3-208ENST00000512813 FAM90A2PQ658T7 463 aa6.44□□□□□ -1.38
CLCN3-208ENST00000512813 GLYATQ6IB77 296 aa6.44□□□□□ -1.38
CLCN3-208ENST00000512813 TEX45Q8NA69 505 aa6.44□□□□□ -1.38
CLCN3-208ENST00000512813 OR51A4Q8NGJ6 313 aa6.44□□□□□ -1.38
CLCN3-208ENST00000512813 OR13C3Q8NGS6 347 aa6.44□□□□□ -1.38
CLCN3-208ENST00000512813 ZNF502Q8TBZ5 544 aa6.44□□□□□ -1.38
CLCN3-208ENST00000512813 RHPN1-AS1Q9BWJ2 59 aa6.44□□□□□ -1.38
CLCN3-208ENST00000512813 FAM192AQ9GZU8 254 aa6.44□□□□□ -1.38
CLCN3-208ENST00000512813 NKIRAS1Q9NYS0 192 aa6.44□□□□□ -1.38
CLCN3-208ENST00000512813 SMPXQ9UHP9 88 aa6.44□□□□□ -1.38
CLCN3-208ENST00000512813 SMIM9A6NGZ8 99 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 METTL15A6NJ78 407 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 TEX22C9J3V5 150 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 NDUFA4O00483 81 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 CHEK1O14757 476 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 ZNF207O43670 478 aaKnown RBP6.43□□□□□ -1.38
CLCN3-208ENST00000512813 SULT1C4O75897 302 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 C1QBP02746 253 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 HIST1H1BP16401 226 aaKnown RBP6.43□□□□□ -1.38
CLCN3-208ENST00000512813 GNRHRP30968 328 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 MAS1LP35410 378 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 SOX2P48431 317 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 UBE2KP61086 200 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 PAFAH1B2P68402 229 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 GINS1Q14691 196 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 MAPRE2Q15555 327 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 VMA21Q3ZAQ7 101 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 ZNF705AQ6ZN79 300 aaPredicted RBP6.43□□□□□ -1.38
CLCN3-208ENST00000512813 MRPL30Q8TCC3 161 aaKnown RBP6.43□□□□□ -1.38
CLCN3-208ENST00000512813 C16orf45Q96MC5 204 aaPredicted RBP6.43□□□□□ -1.38
CLCN3-208ENST00000512813 CMTM3Q96MX0 182 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 GPER1Q99527 375 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 NIPSNAP1Q9BPW8 284 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 ELAC2Q9BQ52 826 aaKnown RBP6.43□□□□□ -1.38
CLCN3-208ENST00000512813 C20orf24Q9BUV8 137 aa6.43□□□□□ -1.38
CLCN3-208ENST00000512813 C1QTNF4Q9BXJ3 329 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms