RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 CD37P11049 281 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 EGR2P11161 476 aaPredicted RBP5.52□□□□□ -1.53
USP46-208ENST00000512656 PSMA1P25786 263 aaKnown RBP5.52□□□□□ -1.53
USP46-208ENST00000512656 LGALS7P47929 136 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 PSMD7P51665 324 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 QRFPP83859 136 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 UNC119Q13432 240 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 INSL4Q14641 139 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 FXYD3Q14802 87 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 PSG5Q15238 335 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 MED22Q15528 200 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 TRAM1Q15629 374 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 RAB11BQ15907 218 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 TATDN3Q17R31 274 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 CASC10Q5T4H9 136 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 IGFL4Q6B9Z1 124 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 LAIR2Q6ISS4 152 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 GLDNQ6ZMI3 551 aaPredicted RBP5.52□□□□□ -1.53
USP46-208ENST00000512656 OVCH2Q7RTZ1 564 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 SGPP2Q8IWX5 399 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 FAM89BQ8N5H3 189 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 POC5Q8NA72 575 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 OR56B1Q8NGI3 324 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 CASTOR1Q8WTX7 329 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 UFD1Q92890 307 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 MS4A10Q96PG2 267 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 CMSS1Q9BQ75 279 aaKnown RBP5.52□□□□□ -1.53
USP46-208ENST00000512656 FAM103A1Q9BTL3 118 aaKnown RBP5.52□□□□□ -1.53
USP46-208ENST00000512656 LPAR5Q9H1C0 372 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 Q9N2K0 584 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 OR1A1Q9P1Q5 309 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 AK3Q9UIJ7 227 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 HUWE1Q7Z6Z7 4374 aaKnown RBP5.52□□□□□ -1.53
USP46-208ENST00000512656 A0A0A6YYD4 124 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 TRIM64CA6NLI5 447 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 TRDCB7Z8K6 153 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 H0Y980 276 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 SOCS1O15524 211 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 SLC25A17O43808 307 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 IGLV1-51P01701 117 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 CD3GP09693 182 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 AADACP22760 399 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 VEGFCP49767 419 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 P2RY14Q15391 338 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 SRSF7Q16629 238 aaKnown RBP eCLIP5.51□□□□□ -1.53
USP46-208ENST00000512656 TM4SF20Q53R12 229 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 OGFRL1Q5TC84 451 aaPredicted RBP5.51□□□□□ -1.53
USP46-208ENST00000512656 LIPKQ5VXJ0 399 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 DRAXINQ8NBI3 349 aaPredicted RBP5.51□□□□□ -1.53
USP46-208ENST00000512656 OR4A4PQ8NGN8 299 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 GRPEL2Q8TAA5 225 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 CYYR1Q96J86 154 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 CENPOQ9BU64 300 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 PARP12Q9H0J9 701 aaKnown RBP5.51□□□□□ -1.53
USP46-208ENST00000512656 SLC35D1Q9NTN3 355 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 RDH8Q9NYR8 311 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 GAB2Q9UQC2 676 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 TPRKBQ9Y3C4 175 aa5.51□□□□□ -1.53
USP46-208ENST00000512656 A8MZ25 164 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 M0R1X1 148 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 CASQ2O14958 399 aaPredicted RBP5.5□□□□□ -1.53
USP46-208ENST00000512656 DENRO43583 198 aaKnown RBP5.5□□□□□ -1.53
USP46-208ENST00000512656 BRI3O95415 125 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 DIRAS3O95661 229 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 IGKV1-16P04430 117 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 SCTP09683 121 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 IGHV4-30-4P0DP06 118 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 RRASP10301 218 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 TPBGQ13641 420 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 RTL8BQ17RB0 113 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 ZNF383Q8NA42 475 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 OR5T1Q8NG75 326 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 OR10J5Q8NHC4 309 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 TMEM203Q969S6 136 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 FAM3DQ96BQ1 224 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 ISOC1Q96CN7 298 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 ARHGAP5-AS1Q96IT6 56 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 USMG5Q96IX5 58 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 TM2D3Q9BRN9 247 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 HDHD3Q9BSH5 251 aaPredicted RBP5.5□□□□□ -1.53
USP46-208ENST00000512656 PECRQ9BY49 303 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 KCNK15Q9H427 330 aa5.5□□□□□ -1.53
USP46-208ENST00000512656 LSM2Q9Y333 95 aaKnown RBP5.5□□□□□ -1.53
USP46-208ENST00000512656 A0A0B4J203 849 aa5.49□□□□□ -1.53
USP46-208ENST00000512656 FOXI3A8MTJ6 420 aaPredicted RBP5.49□□□□□ -1.53
USP46-208ENST00000512656 BET1O15155 118 aa5.49□□□□□ -1.53
USP46-208ENST00000512656 FABP7O15540 132 aa5.49□□□□□ -1.53
USP46-208ENST00000512656 CREBL2O60519 120 aaPredicted RBP5.49□□□□□ -1.53
USP46-208ENST00000512656 PROP1O75360 226 aa5.49□□□□□ -1.53
USP46-208ENST00000512656 IFNA6P05013 189 aa5.49□□□□□ -1.53
USP46-208ENST00000512656 HSMCR30P0CW71 290 aa5.49□□□□□ -1.53
USP46-208ENST00000512656 GADD45AP24522 165 aa5.49□□□□□ -1.53
USP46-208ENST00000512656 CALRP27797 417 aaKnown RBP5.49□□□□□ -1.53
USP46-208ENST00000512656 TMEM50BP56557 158 aa5.49□□□□□ -1.53
USP46-208ENST00000512656 KLF5Q13887 457 aaPredicted RBP5.49□□□□□ -1.53
USP46-208ENST00000512656 C2orf76Q3KRA6 126 aa5.49□□□□□ -1.53
USP46-208ENST00000512656 VMA21Q3ZAQ7 101 aa5.49□□□□□ -1.53
USP46-208ENST00000512656 TMEM177Q53S58 311 aa5.49□□□□□ -1.53
USP46-208ENST00000512656 LCN12Q6JVE5 192 aa5.49□□□□□ -1.53
USP46-208ENST00000512656 GTSCR1Q86UQ5 136 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms