RNA–Protein interactions for RNA: ENST00000511642.5

CCND3-215, Transcript of cyclin D3, human

TSL 2 BASIC

Gene CCND3, Length 2,394 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-215	ENST00000511642	RFESD	Q8TAC1	157 aa		11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	LURAP1	Q96LR2	239 aa		11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	HIST1H2BL	Q99880	126 aa		11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	ELOVL1	Q9BW60	279 aa		11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	FZR1	Q9UM11	496 aa		11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	PSG11	Q9UQ72	335 aa		11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	KNTC1	P50748	2209 aa		11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	MARCH11	A6NNE9	402 aa		11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	DEFB108A	A8MXU0	73 aa		11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	IFNL4	K9M1U5	179 aa		11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	KITLG	P21583	273 aa		11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	NPPC	P23582	126 aa		11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	KIR2DL2	P43627	348 aa	Predicted RBP	11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	DNLZ	Q5SXM8	178 aa		11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	CD177	Q8N6Q3	437 aa		11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	OR4F5	Q8NH21	305 aa		11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	OR4F4	Q96R69	305 aa		11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	QTRT1	Q9BXR0	403 aa	Known RBP	11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	MSL2	Q9HCI7	577 aa		11.47	□□□□□ -0.57
CCND3-215	ENST00000511642	PTPRB	P23467	1997 aa		11.46	□□□□□ -0.57
CCND3-215	ENST00000511642	PAGE4	O60829	102 aa		11.46	□□□□□ -0.57
CCND3-215	ENST00000511642	OR9G9	P0C7N8	305 aa		11.46	□□□□□ -0.57
CCND3-215	ENST00000511642	CECR9	P0C854	216 aa		11.46	□□□□□ -0.57
CCND3-215	ENST00000511642	SOX8	P57073	446 aa		11.46	□□□□□ -0.57
CCND3-215	ENST00000511642	AARD	Q4LEZ3	155 aa		11.46	□□□□□ -0.57
CCND3-215	ENST00000511642	TGIF2LY	Q8IUE0	185 aa		11.46	□□□□□ -0.57
CCND3-215	ENST00000511642	RBM14	Q96PK6	669 aa	Known RBP	11.46	□□□□□ -0.57
CCND3-215	ENST00000511642	DIRC2	Q96SL1	478 aa		11.46	□□□□□ -0.57
CCND3-215	ENST00000511642	HSD17B10	Q99714	261 aa	Known RBP	11.46	□□□□□ -0.57
CCND3-215	ENST00000511642	GAB2	Q9UQC2	676 aa		11.46	□□□□□ -0.57
CCND3-215	ENST00000511642	TIMM8A	O60220	97 aa	Predicted RBP	11.46	□□□□□ -0.58
CCND3-215	ENST00000511642	PAX5	Q02548	391 aa		11.46	□□□□□ -0.58
CCND3-215	ENST00000511642	CNEP1R1	Q8N9A8	125 aa		11.46	□□□□□ -0.58
CCND3-215	ENST00000511642	C9orf106	Q8NAJ2	232 aa		11.46	□□□□□ -0.58
CCND3-215	ENST00000511642		Q8TCH9	128 aa		11.46	□□□□□ -0.58
CCND3-215	ENST00000511642	PACRG	Q96M98	296 aa	Predicted RBP	11.46	□□□□□ -0.58
CCND3-215	ENST00000511642	PITPNC1	Q9UKF7	332 aa		11.46	□□□□□ -0.58
CCND3-215	ENST00000511642	LAMP3	Q9UQV4	416 aa		11.46	□□□□□ -0.58
CCND3-215	ENST00000511642		H7BYZ3	331 aa		11.45	□□□□□ -0.58
CCND3-215	ENST00000511642	GALR1	P47211	349 aa		11.45	□□□□□ -0.58
CCND3-215	ENST00000511642	HTD2	P86397	168 aa		11.45	□□□□□ -0.58
CCND3-215	ENST00000511642	GAMT	Q14353	236 aa		11.45	□□□□□ -0.58
CCND3-215	ENST00000511642	SMIM21	Q3B7S5	101 aa		11.45	□□□□□ -0.58
CCND3-215	ENST00000511642	WDR83OS	Q9Y284	106 aa		11.45	□□□□□ -0.58
CCND3-215	ENST00000511642		A0A1B0GWJ7	208 aa		11.45	□□□□□ -0.58
CCND3-215	ENST00000511642	GATC	O43716	136 aa	Known RBP	11.45	□□□□□ -0.58
CCND3-215	ENST00000511642	RBMXL2	O75526	392 aa	Known RBP	11.45	□□□□□ -0.58
CCND3-215	ENST00000511642	GYPA	P02724	150 aa		11.45	□□□□□ -0.58
CCND3-215	ENST00000511642	DUT	P33316	252 aa	Known RBP	11.45	□□□□□ -0.58
CCND3-215	ENST00000511642	GCSAML	Q5JQS6	135 aa		11.45	□□□□□ -0.58
CCND3-215	ENST00000511642	TMEM183A	Q8IXX5	376 aa		11.45	□□□□□ -0.58
CCND3-215	ENST00000511642	R3HDM4	Q96D70	268 aa		11.45	□□□□□ -0.58
CCND3-215	ENST00000511642	NEIL1	Q96FI4	390 aa	Predicted RBP	11.45	□□□□□ -0.58
CCND3-215	ENST00000511642	PFDN5	Q99471	154 aa		11.45	□□□□□ -0.58
CCND3-215	ENST00000511642	OR6C3	Q9NZP0	311 aa		11.45	□□□□□ -0.58
CCND3-215	ENST00000511642	HRAS	P01112	189 aa		11.44	□□□□□ -0.58
CCND3-215	ENST00000511642	EGR1	P18146	543 aa		11.44	□□□□□ -0.58
CCND3-215	ENST00000511642	CDC34	P49427	236 aa	Predicted RBP	11.44	□□□□□ -0.58
CCND3-215	ENST00000511642	FABP6	P51161	128 aa		11.44	□□□□□ -0.58
CCND3-215	ENST00000511642	LINC00469	Q8N7U9	141 aa		11.44	□□□□□ -0.58
CCND3-215	ENST00000511642	ZNF709	Q8N972	641 aa		11.44	□□□□□ -0.58
CCND3-215	ENST00000511642	C1orf162	Q8NEQ5	155 aa	Predicted RBP	11.44	□□□□□ -0.58
CCND3-215	ENST00000511642	LOXL4	Q96JB6	756 aa		11.44	□□□□□ -0.58
CCND3-215	ENST00000511642	LOC400499	M0QZD8	3231 aa		11.44	□□□□□ -0.58
CCND3-215	ENST00000511642	IGLV1-44	P01699	117 aa		11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	LTC4S	Q16873	150 aa		11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	COA6	Q5JTJ3	125 aa	Known RBP	11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	FAM90A1	Q86YD7	464 aa		11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	LRRC29	Q8WV35	223 aa		11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	PCGF1	Q9BSM1	259 aa		11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	DOCK11	Q5JSL3	2073 aa		11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	PRR14L	Q5THK1	2151 aa		11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	C11orf94	C9JXX5	98 aa		11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	C17orf112	F2Z3M2	114 aa		11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	ADH4	P08319	380 aa		11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	TUBG1	P23258	451 aa		11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	HOXC12	P31275	282 aa		11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	SRSF6	Q13247	344 aa	Known RBP	11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	EDDM3A	Q14507	147 aa		11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	MBNL2	Q5VZF2	373 aa	Known RBP	11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	MEGF10	Q96KG7	1140 aa		11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	GFOD1	Q9NXC2	390 aa		11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	URB1	O60287	2271 aa	Known RBP	11.43	□□□□□ -0.58
CCND3-215	ENST00000511642	IGKV1D-17	A0A075B6S4	117 aa		11.42	□□□□□ -0.58
CCND3-215	ENST00000511642	TRAV38-1	A0A0B4J264	116 aa		11.42	□□□□□ -0.58
CCND3-215	ENST00000511642	IGHV1-18	A0A0C4DH31	117 aa		11.42	□□□□□ -0.58
CCND3-215	ENST00000511642	SPINT2	O43291	252 aa		11.42	□□□□□ -0.58
CCND3-215	ENST00000511642	GALR2	O43603	387 aa	Predicted RBP	11.42	□□□□□ -0.58
CCND3-215	ENST00000511642	GGCT	O75223	188 aa	Known RBP	11.42	□□□□□ -0.58
CCND3-215	ENST00000511642	VENTX	O95231	258 aa		11.42	□□□□□ -0.58
CCND3-215	ENST00000511642	CD1B	P29016	333 aa		11.42	□□□□□ -0.58
CCND3-215	ENST00000511642	PRDX2	P32119	198 aa		11.42	□□□□□ -0.58
CCND3-215	ENST00000511642	GPX4	P36969	197 aa	Predicted RBP	11.42	□□□□□ -0.58
CCND3-215	ENST00000511642	P2RY6	Q15077	328 aa		11.42	□□□□□ -0.58
CCND3-215	ENST00000511642	MSMP	Q1L6U9	139 aa		11.42	□□□□□ -0.58
CCND3-215	ENST00000511642	CLEC12B	Q2HXU8	276 aa		11.42	□□□□□ -0.58
CCND3-215	ENST00000511642	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.42	□□□□□ -0.58
CCND3-215	ENST00000511642	ANAPC16	Q96DE5	110 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms