RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 ARV1Q9H2C2 271 aa12.26□□□□□ -0.45
PHF3-209ENST00000509330 TMEM218A2RU14 115 aa12.26□□□□□ -0.45
PHF3-209ENST00000509330 IFNA17P01571 189 aa12.26□□□□□ -0.45
PHF3-209ENST00000509330 PAX5Q02548 391 aa12.26□□□□□ -0.45
PHF3-209ENST00000509330 AVPI1Q5T686 147 aa12.26□□□□□ -0.45
PHF3-209ENST00000509330 BTNL8Q6UX41 500 aa12.26□□□□□ -0.45
PHF3-209ENST00000509330 SAT2Q96F10 170 aaPredicted RBP12.26□□□□□ -0.45
PHF3-209ENST00000509330 S1PR3Q99500 378 aa12.26□□□□□ -0.45
PHF3-209ENST00000509330 TSNAXQ99598 290 aaKnown RBP12.26□□□□□ -0.45
PHF3-209ENST00000509330 ATP5SQ99766 215 aa12.26□□□□□ -0.45
PHF3-209ENST00000509330 TOLLIPQ9H0E2 274 aa12.26□□□□□ -0.45
PHF3-209ENST00000509330 WSB1Q9Y6I7 421 aa12.26□□□□□ -0.45
PHF3-209ENST00000509330 CFAP46Q8IYW2 2715 aa12.26□□□□□ -0.45
PHF3-209ENST00000509330 HCFC1P51610 2035 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 UBE2L5PA0A1B0GUS4 154 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 OPN1MWP04001 364 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 OPN1MW2P0DN77 364 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 OPN1MW3P0DN78 364 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 MYOD1P15172 320 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 F2RL1P55085 397 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 MRPS11P82912 194 aaKnown RBP12.25□□□□□ -0.45
PHF3-209ENST00000509330 MSMO1Q15800 293 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 FAM209AQ5JX71 171 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 C1orf87Q8N0U7 546 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 IDI2-AS1Q9NZ38 188 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 TANC2Q9HCD6 1990 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 MALRD1Q5VYJ5 2156 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 IGHV1-69-2A0A0G2JMI3 117 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 DVL1O14640 695 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 TSPAN4O14817 238 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 SLC25A6P12236 298 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 DIRC2Q96SL1 478 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 EIF5A2Q9GZV4 153 aaKnown RBP12.25□□□□□ -0.45
PHF3-209ENST00000509330 PARP11Q9NR21 331 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.25□□□□□ -0.45
PHF3-209ENST00000509330 NUP50Q9UKX7 468 aa12.25□□□□□ -0.45
PHF3-209ENST00000509330 RAB19A4D1S5 217 aa12.24□□□□□ -0.45
PHF3-209ENST00000509330 COL8A2P25067 703 aa12.24□□□□□ -0.45
PHF3-209ENST00000509330 PPT1P50897 306 aa12.24□□□□□ -0.45
PHF3-209ENST00000509330 BAXQ07812 192 aa12.24□□□□□ -0.45
PHF3-209ENST00000509330 DTD1Q8TEA8 209 aa12.24□□□□□ -0.45
PHF3-209ENST00000509330 OR4C12Q96R67 309 aa12.24□□□□□ -0.45
PHF3-209ENST00000509330 MS4A5Q9H3V2 200 aa12.24□□□□□ -0.45
PHF3-209ENST00000509330 hADV38S2A0JD32 116 aa12.24□□□□□ -0.45
PHF3-209ENST00000509330 WNT2P09544 360 aa12.24□□□□□ -0.45
PHF3-209ENST00000509330 CCL20P78556 96 aa12.24□□□□□ -0.45
PHF3-209ENST00000509330 CR1LQ2VPA4 569 aa12.24□□□□□ -0.45
PHF3-209ENST00000509330 VSIRQ9H7M9 311 aa12.24□□□□□ -0.45
PHF3-209ENST00000509330 UQCC1Q9NVA1 299 aa12.24□□□□□ -0.45
PHF3-209ENST00000509330 CACNA1BQ00975 2339 aa12.24□□□□□ -0.45
PHF3-209ENST00000509330 ELLP55199 621 aaPredicted RBP12.24□□□□□ -0.45
PHF3-209ENST00000509330 TMEM200BQ69YZ2 307 aa12.24□□□□□ -0.45
PHF3-209ENST00000509330 HINT2Q9BX68 163 aa12.24□□□□□ -0.45
PHF3-209ENST00000509330 NDUFB3O43676 98 aa12.23□□□□□ -0.45
PHF3-209ENST00000509330 IFNA5P01569 189 aa12.23□□□□□ -0.45
PHF3-209ENST00000509330 P0C879 139 aa12.23□□□□□ -0.45
PHF3-209ENST00000509330 CEBPGP53567 150 aa12.23□□□□□ -0.45
PHF3-209ENST00000509330 TMEM88Q6PEY1 159 aa12.23□□□□□ -0.45
PHF3-209ENST00000509330 ZNF383Q8NA42 475 aa12.23□□□□□ -0.45
PHF3-209ENST00000509330 HSPB7Q9UBY9 170 aa12.23□□□□□ -0.45
PHF3-209ENST00000509330 RNASEK-C17orf49H0YIS7 233 aa12.23□□□□□ -0.45
PHF3-209ENST00000509330 SFTA3P0C7M3 94 aa12.23□□□□□ -0.45
PHF3-209ENST00000509330 MMP9P14780 707 aa12.23□□□□□ -0.45
PHF3-209ENST00000509330 DIAPH2-AS1Q14236 149 aa12.23□□□□□ -0.45
PHF3-209ENST00000509330 HFEQ30201 348 aa12.23□□□□□ -0.45
PHF3-209ENST00000509330 PRELID3BQ9Y3B1 194 aa12.23□□□□□ -0.45
PHF3-209ENST00000509330 RAB29O14966 203 aa12.22□□□□□ -0.45
PHF3-209ENST00000509330 SLC38A11Q08AI6 406 aa12.22□□□□□ -0.45
PHF3-209ENST00000509330 IL34Q6ZMJ4 242 aa12.22□□□□□ -0.45
PHF3-209ENST00000509330 ZNF525Q8N782 197 aa12.22□□□□□ -0.45
PHF3-209ENST00000509330 OR4A16Q8NH70 328 aa12.22□□□□□ -0.45
PHF3-209ENST00000509330 ZNF714Q96N38 554 aa12.22□□□□□ -0.45
PHF3-209ENST00000509330 TMEM140Q9NV12 185 aa12.22□□□□□ -0.45
PHF3-209ENST00000509330 TNCP24821 2201 aa12.22□□□□□ -0.45
PHF3-209ENST00000509330 ZNF729A6NN14 1252 aaPredicted RBP12.22□□□□□ -0.45
PHF3-209ENST00000509330 B9A039 149 aa12.22□□□□□ -0.45
PHF3-209ENST00000509330 HPRT1P00492 218 aa12.22□□□□□ -0.45
PHF3-209ENST00000509330 IGKV1-16P04430 117 aa12.22□□□□□ -0.45
PHF3-209ENST00000509330 LRRC10Q5BKY1 277 aa12.22□□□□□ -0.45
PHF3-209ENST00000509330 AKR1C8PQ5T2L2 129 aa12.22□□□□□ -0.45
PHF3-209ENST00000509330 PUSL1Q8N0Z8 303 aaKnown RBP12.22□□□□□ -0.45
PHF3-209ENST00000509330 ZNF251Q9BRH9 671 aa12.22□□□□□ -0.45
PHF3-209ENST00000509330 FAM74A7A6NL05 159 aa12.21□□□□□ -0.45
PHF3-209ENST00000509330 ERVK-16P61578 105 aa12.21□□□□□ -0.45
PHF3-209ENST00000509330 FAM74A3Q4VXF1 159 aa12.21□□□□□ -0.45
PHF3-209ENST00000509330 SCGB1C1Q8TD33 95 aa12.21□□□□□ -0.45
PHF3-209ENST00000509330 SFT2D1Q8WV19 159 aa12.21□□□□□ -0.45
PHF3-209ENST00000509330 RARRES2Q99969 163 aa12.21□□□□□ -0.45
PHF3-209ENST00000509330 RPUSD1Q9UJJ7 312 aaKnown RBP12.21□□□□□ -0.45
PHF3-209ENST00000509330 ARHGAP32A7KAX9 2087 aa12.21□□□□□ -0.45
PHF3-209ENST00000509330 PIGBOS1A0A0B4J2F0 54 aa12.21□□□□□ -0.45
PHF3-209ENST00000509330 HMGB3O15347 200 aaKnown RBP12.21□□□□□ -0.45
PHF3-209ENST00000509330 ATG12O94817 140 aa12.21□□□□□ -0.45
PHF3-209ENST00000509330 DEFA4P12838 97 aa12.21□□□□□ -0.45
PHF3-209ENST00000509330 RAB7AP51149 207 aa12.21□□□□□ -0.45
PHF3-209ENST00000509330 C1QTNF12Q5T7M4 302 aa12.21□□□□□ -0.45
PHF3-209ENST00000509330 UQCC3Q6UW78 93 aa12.21□□□□□ -0.45
PHF3-209ENST00000509330 LINC00312Q9Y6C7 94 aa12.21□□□□□ -0.45
PHF3-209ENST00000509330 ZNF439Q8NDP4 499 aa12.21□□□□□ -0.46
PHF3-209ENST00000509330 RHOVQ96L33 236 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms