RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 LCE2BO14633 110 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 CSF1P09603 554 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 IGKV1-13P0DP09 117 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 PTHLHP12272 177 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 PTBP1P26599 531 aaKnown RBP eCLIP8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 RPS16P62249 146 aaKnown RBP8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 C19orf54Q5BKX5 351 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 TCTEX1D4Q5JR98 221 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 C9orf152Q5JTZ5 239 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 TREML4Q6UXN2 200 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 MFSD4AQ8N468 514 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 ARRDC1Q8N5I2 433 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 DRAXINQ8NBI3 349 aaPredicted RBP8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 MINDY2Q8NBR6 621 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 OR4F17Q8NGA8 305 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 OR5H2Q8NGV7 314 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 MOB3AQ96BX8 217 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 DGCR14Q96DF8 476 aaKnown RBP8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 C5orf30Q96GV9 206 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 OR4F4Q96R69 305 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 ABHD1Q96SE0 405 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 TAS2R8Q9NYW2 309 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 EXTL2Q9UBQ6 330 aa8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 RSL24D1Q9UHA3 163 aaKnown RBP8.34□□□□□ -1.07
POLR2J3-213ENST00000508848 LINC01548A6NM66 108 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 LINC00473A8K010 186 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 RGS5O15539 181 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 GSTZ1O43708 216 aaPredicted RBP8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 CREBL2O60519 120 aaPredicted RBP8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 IGLV1-40P01703 118 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 IGLV2-23P01705 113 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 CD74P04233 296 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 CD28P10747 220 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 AADACP22760 399 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 PSMB8P28062 276 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 GNRHRP30968 328 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 CDX1P47902 265 aaPredicted RBP8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 RFX2P48378 723 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 UBE2KP61086 200 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 CX3CL1P78423 397 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 POU2AF1Q16633 256 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 GLDNQ6ZMI3 551 aaPredicted RBP8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 TMEM17Q86X19 198 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 TMEM229BQ8NBD8 167 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 WFDC9Q8NEX5 89 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 MYOZ3Q8TDC0 251 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 DEDD2Q8WXF8 326 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 CITED2Q99967 270 aaPredicted RBP8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 EHFQ9NZC4 300 aa8.33□□□□□ -1.08
POLR2J3-213ENST00000508848 SRRM4A7MD48 611 aaKnown RBP8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 SHOXO15266 292 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 HRASP01112 189 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 EGR2P11161 476 aaPredicted RBP8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 CNTFRP26992 372 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 TNFSF8P32971 234 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 HRH1P35367 487 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 LINC00205P59089 165 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 HERV-K104P61576 105 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 TMEM95Q3KNT9 176 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 VMA21Q3ZAQ7 101 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 DMRTA1Q5VZB9 504 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 KCTD9Q7L273 389 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 SNX29P2Q8IUI4 249 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 CMTM1Q8IZ96 169 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 OR52I2Q8NH67 350 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 OR4S2Q8NH73 311 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 VSTM2AQ8TAG5 236 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 SMIM4Q8WVI0 70 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 ZNF486Q96H40 463 aaPredicted RBP8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 DIRAS2Q96HU8 199 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 HSPB9Q9BQS6 159 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 SLC5A7Q9GZV3 580 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 FBXL15Q9H469 300 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 PLEKHA2Q9HB19 425 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 METTL1Q9UBP6 276 aaKnown RBP8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 KLK11Q9UBX7 282 aa8.32□□□□□ -1.08
POLR2J3-213ENST00000508848 TCRBV4S1A1TA0A5B7 111 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 FCN1O00602 326 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 IL6RP08887 468 aaPredicted RBP8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 VDAC1P21796 283 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 S100GP29377 79 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 MAS1LP35410 378 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 ETV6P41212 452 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 ECI1P42126 302 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 BRWD1-AS2P59051 145 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 RPL30P62888 115 aaKnown RBP8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 RUNX1Q01196 453 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 CATR1Q13166 79 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 LINC00299Q6ZSB3 139 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 LHFPL1Q86WI0 220 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 LAX1Q8IWV1 398 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 OR5M8Q8NGP6 311 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 OR4A5Q8NH83 315 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 MCFD2Q8NI22 146 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 SECTM1Q8WVN6 248 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 UBE2E2Q96LR5 201 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 HARBI1Q96MB7 349 aa8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 NOL4LQ96MY1 436 aaPredicted RBP8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 ZNF2Q9BSG1 426 aaPredicted RBP8.31□□□□□ -1.08
POLR2J3-213ENST00000508848 RSRP1Q9BUV0 290 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms