RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 RPS4Y1P22090 263 aaKnown RBP3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 GABRA2P47869 451 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 VEGFCP49767 419 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 HERVK_113P61574 105 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 CXCL6P80162 114 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 PSG9Q00887 426 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 FABP9Q0Z7S8 132 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 DHRS2Q13268 280 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 LY6DQ14210 128 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 KIAA0040Q15053 153 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 OR8G1Q15617 311 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 CST6Q15828 149 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 RSPO1Q2MKA7 263 aaPredicted RBP3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 LINC00303Q3SY05 128 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 ORMDL2Q53FV1 153 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 OCIAD2Q56VL3 154 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 TNFAIP8L3Q5GJ75 292 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 H2AFVQ71UI9 128 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 OR5A1Q8NGJ0 315 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 OR5W2Q8NH69 310 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 LMX1AQ8TE12 382 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 TMEM190Q8WZ59 177 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 CARD19Q96LW7 228 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 ATOH8Q96SQ7 321 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 SOSTQ9BQB4 213 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 CHCHD5Q9BSY4 110 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 PAXXQ9BUH6 204 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 LINC00470Q9BZP3 86 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 OR2H1Q9GZK4 316 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 GTSF1LQ9H1H1 148 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 MED28Q9H204 178 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 OR2D2Q9H210 308 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 KCNIP2Q9NS61 270 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 CA10Q9NS85 328 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 TMEM38BQ9NVV0 291 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 HIGD1AQ9Y241 93 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 LAMTOR2Q9Y2Q5 125 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 MED31Q9Y3C7 131 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 FIS1Q9Y3D6 152 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 FLVCR1Q9Y5Y0 555 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 SIGLEC1Q9BZZ2 1709 aa3.13□□□□□ -1.91
SMARCA5-202ENST00000508573 ATRNO75882 1429 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 NOS1P29475 1434 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 NAV1Q8NEY1 1877 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 THSD7AQ9UPZ6 1657 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 IGLV8-61A0A075B6I0 122 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 IGKV6-21A0A0C4DH24 114 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 ZNF705GA8MUZ8 300 aaPredicted RBP3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 F6UZH7 168 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 H7BYZ3 331 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 LST1O00453 97 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 CD5LO43866 347 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 APOMO95445 188 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 PATE4P0C8F1 98 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 SMIM17P0DL12 118 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 PSG2P11465 335 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 IMPA1P29218 277 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 CMPK1P30085 196 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 PPP1CAP62136 330 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 LOXL1Q08397 574 aaPredicted RBP3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 MMDQ15546 238 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 TAF9Q16594 264 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 DNLZQ5SXM8 178 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 WDR59Q6PJI9 974 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 CEMP1Q6PRD7 247 aaPredicted RBP3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 RNF165Q6ZSG1 346 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 DEFB128Q7Z7B8 93 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 MDP1Q86V88 176 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 ZNF645Q8N7E2 425 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 LINC01555Q8NAE3 123 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 TMEM229BQ8NBD8 167 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 Q8NBF4 154 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 OR2M3Q8NG83 312 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 FNDC9Q8TBE3 224 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 SLC25A40Q8TBP6 338 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 ORAOV1Q8WV07 137 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 SLC7A6Q92536 515 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 FRZBQ92765 325 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 ARL11Q969Q4 196 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 PHYHIPLQ96FC7 376 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 OR2M2Q96R28 347 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 TP53RKQ96S44 253 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 IFI27L2Q9H2X8 130 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 PLEKHF2Q9H8W4 249 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 SCRT2Q9NQ03 307 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 NIT2Q9NQR4 276 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 RPUSD1Q9UJJ7 312 aaKnown RBP3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 NALCNQ8IZF0 1738 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 EIF4G3O43432 1585 aaKnown RBP3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 RB1CC1Q8TDY2 1594 aa3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 XIRP1Q702N8 1843 aaKnown RBP3.12□□□□□ -1.91
SMARCA5-202ENST00000508573 TRBV19A0A075B6N1 114 aa3.11□□□□□ -1.91
SMARCA5-202ENST00000508573 A0A087X002 238 aa3.11□□□□□ -1.91
SMARCA5-202ENST00000508573 UQCRHLA0A096LP55 91 aa3.11□□□□□ -1.91
SMARCA5-202ENST00000508573 IGHV1-69-2A0A0G2JMI3 117 aa3.11□□□□□ -1.91
SMARCA5-202ENST00000508573 PMS2P5A8MQ11 134 aa3.11□□□□□ -1.91
SMARCA5-202ENST00000508573 A8MXK9 166 aa3.11□□□□□ -1.91
SMARCA5-202ENST00000508573 PGLYRP1O75594 196 aaPredicted RBP3.11□□□□□ -1.91
SMARCA5-202ENST00000508573 DEDDO75618 318 aa3.11□□□□□ -1.91
SMARCA5-202ENST00000508573 OR2H2O95918 312 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms