RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 MOGAT2Q3SYC2 334 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 MORN2Q502X0 79 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 TCTEX1D4Q5JR98 221 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 C6orf183Q5T699 404 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 UBE2UQ5VVX9 321 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 ZNF773Q6PK81 442 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 GAPTQ8N292 157 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 Q8N2B8 174 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 FAM89BQ8N5H3 189 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 ZNF439Q8NDP4 499 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 OR10A7Q8NGE5 316 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 OR52M1Q8NGK5 317 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 OR6M1Q8NGM8 313 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 RTN4IP1Q8WWV3 396 aaPredicted RBP3.57□□□□□ -1.84
NUP54-206ENST00000508465 MAFIPQ8WZ33 124 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 ST6GALNAC6Q969X2 333 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 CREB3L1Q96BA8 519 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 SAT2Q96F10 170 aaPredicted RBP3.57□□□□□ -1.84
NUP54-206ENST00000508465 URB1-AS1Q96HZ7 61 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 NOL4LQ96MY1 436 aaPredicted RBP3.57□□□□□ -1.84
NUP54-206ENST00000508465 PECRQ9BY49 303 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 YTHDF1Q9BYJ9 559 aaKnown RBP3.57□□□□□ -1.84
NUP54-206ENST00000508465 Q9H521 79 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 RANBP3Q9H6Z4 567 aaPredicted RBP3.57□□□□□ -1.84
NUP54-206ENST00000508465 PLSCR3Q9NRY6 295 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 OR1A1Q9P1Q5 309 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 ELF5Q9UKW6 265 aaPredicted RBP3.57□□□□□ -1.84
NUP54-206ENST00000508465 RAB22AQ9UL26 194 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 BLOC1S6Q9UL45 172 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 AMMECR1Q9Y4X0 333 aaPredicted RBP3.57□□□□□ -1.84
NUP54-206ENST00000508465 V9GY05 133 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 TGP01266 2768 aa3.57□□□□□ -1.84
NUP54-206ENST00000508465 WNK1Q9H4A3 2382 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 IGKV1-6A0A0C4DH72 117 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 TCRBV4S1A1TA0A5B7 111 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 IFITM5A6NNB3 132 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 FOXI3A8MTJ6 420 aaPredicted RBP3.56□□□□□ -1.84
NUP54-206ENST00000508465 OOSP1A8MZH6 123 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 J3QRK9 145 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 PDCD5O14737 125 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 NAPSAO96009 420 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 PRB2P02812 416 aaPredicted RBP3.56□□□□□ -1.84
NUP54-206ENST00000508465 RAB3BP20337 219 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 GADD45AP24522 165 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 MYL9P24844 172 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 PSMA1P25786 263 aaKnown RBP3.56□□□□□ -1.84
NUP54-206ENST00000508465 CNTFRP26992 372 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 SDC2P34741 201 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 TGFBR1P36897 503 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 RAB7AP51149 207 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 ARHGDIBP52566 201 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 PPP5CP53041 499 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 GABARAPL2P60520 117 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 ZNF816Q0VGE8 651 aaPredicted RBP3.56□□□□□ -1.84
NUP54-206ENST00000508465 CDNFQ49AH0 187 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 RPL39P5Q59GN2 51 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 ZNF880Q6PDB4 577 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 TMEM88Q6PEY1 159 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 C11orf88Q6PI97 169 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 CD200R1LQ6Q8B3 271 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 SLC25A48Q6ZT89 311 aaKnown RBP3.56□□□□□ -1.84
NUP54-206ENST00000508465 C16orf82Q7Z2V1 217 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 OR2W3Q7Z3T1 314 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 TGIF2LXQ8IUE1 241 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 ODF3L1Q8IXM7 274 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 OR8H3Q8N146 312 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 LINC00311Q8N616 119 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 POC5Q8NA72 575 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 DRAXINQ8NBI3 349 aaPredicted RBP3.56□□□□□ -1.84
NUP54-206ENST00000508465 OR2T10Q8NGZ9 312 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 GLMPQ8WWB7 406 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 GALMQ96C23 342 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 ABHD14BQ96IU4 210 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 ABHD1Q96SE0 405 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 URM1Q9BTM9 101 aaKnown RBP3.56□□□□□ -1.84
NUP54-206ENST00000508465 TM2D1Q9BX74 207 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 MRPL20Q9BYC9 149 aaKnown RBP3.56□□□□□ -1.84
NUP54-206ENST00000508465 ATG5Q9H1Y0 275 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 Q9N2K0 584 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 TXNL4BQ9NX01 149 aaKnown RBP3.56□□□□□ -1.84
NUP54-206ENST00000508465 NDUFB11Q9NX14 153 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 ABRACLQ9P1F3 81 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 ZNF230Q9UIE0 474 aaPredicted RBP3.56□□□□□ -1.84
NUP54-206ENST00000508465 DAPK2Q9UIK4 370 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 KCNK7Q9Y2U2 307 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 MOB4Q9Y3A3 225 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 NOTCH1P46531 2555 aa3.56□□□□□ -1.84
NUP54-206ENST00000508465 SERPINE3A8MV23 424 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 TRDCB7Z8K6 153 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 G3V4G9 280 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 FCN1O00602 326 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 BET1O15155 118 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 HSPA12AO43301 675 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 LANCL1O43813 399 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 YPEL1O60688 119 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 CA11O75493 328 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 MOSP00540 346 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 FCER2P06734 321 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 GSTT2P0CG29 244 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 GSTT2BP0CG30 244 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms